data_5KR0
#
_model_server_result.job_id            wDWT1vi_uRS4hDO_CoD5SA 
_model_server_result.datetime_utc      '2024-11-12 19:35:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kr0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":101}' 
#
_entry.id    5KR0 
#
_exptl.entry_id    5KR0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KR0 
_cell.length_a            45.65 
_cell.length_b            57.74 
_cell.length_c            86.32 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KR0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 201 n n 
C1 C2 GOL sing 202 n n 
C1 H11 GOL sing 203 n n 
C1 H12 GOL sing 204 n n 
O1 HO1 GOL sing 205 n n 
C2 O2 GOL sing 206 n n 
C2 C3 GOL sing 207 n n 
C2 H2 GOL sing 208 n n 
O2 HO2 GOL sing 209 n n 
C3 O3 GOL sing 210 n n 
C3 H31 GOL sing 211 n n 
C3 H32 GOL sing 212 n n 
O3 HO3 GOL sing 213 n n 
#
_atom_sites.entry_id                     5KR0 
_atom_sites.fract_transf_matrix[1][1]    0.021906 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017319 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011585 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 478 A 1 101 1 478 478 . 
D 3 GOL B 1 101 4 GOL GOL . 
E 4 HOH A 1 201 167 HOH HOH . 
E 4 HOH A 2 202 20 HOH HOH . 
E 4 HOH A 3 203 102 HOH HOH . 
E 4 HOH A 4 204 55 HOH HOH . 
E 4 HOH A 5 205 22 HOH HOH . 
E 4 HOH A 6 206 105 HOH HOH . 
E 4 HOH A 7 207 193 HOH HOH . 
E 4 HOH A 8 208 145 HOH HOH . 
E 4 HOH A 9 209 61 HOH HOH . 
E 4 HOH A 10 210 85 HOH HOH . 
E 4 HOH A 11 211 118 HOH HOH . 
E 4 HOH A 12 212 80 HOH HOH . 
E 4 HOH A 13 213 53 HOH HOH . 
E 4 HOH A 14 214 128 HOH HOH . 
E 4 HOH A 15 215 155 HOH HOH . 
E 4 HOH A 16 216 3 HOH HOH . 
E 4 HOH A 17 217 58 HOH HOH . 
E 4 HOH A 18 218 41 HOH HOH . 
E 4 HOH A 19 219 73 HOH HOH . 
E 4 HOH A 20 220 24 HOH HOH . 
E 4 HOH A 21 221 7 HOH HOH . 
E 4 HOH A 22 222 115 HOH HOH . 
E 4 HOH A 23 223 16 HOH HOH . 
E 4 HOH A 24 224 34 HOH HOH . 
E 4 HOH A 25 225 11 HOH HOH . 
E 4 HOH A 26 226 188 HOH HOH . 
E 4 HOH A 27 227 153 HOH HOH . 
E 4 HOH A 28 228 28 HOH HOH . 
E 4 HOH A 29 229 174 HOH HOH . 
E 4 HOH A 30 230 94 HOH HOH . 
E 4 HOH A 31 231 124 HOH HOH . 
E 4 HOH A 32 232 161 HOH HOH . 
E 4 HOH A 33 233 163 HOH HOH . 
E 4 HOH A 34 234 95 HOH HOH . 
E 4 HOH A 35 235 15 HOH HOH . 
E 4 HOH A 36 236 47 HOH HOH . 
E 4 HOH A 37 237 62 HOH HOH . 
E 4 HOH A 38 238 132 HOH HOH . 
E 4 HOH A 39 239 48 HOH HOH . 
E 4 HOH A 40 240 82 HOH HOH . 
E 4 HOH A 41 241 26 HOH HOH . 
E 4 HOH A 42 242 75 HOH HOH . 
E 4 HOH A 43 243 18 HOH HOH . 
E 4 HOH A 44 244 181 HOH HOH . 
E 4 HOH A 45 245 131 HOH HOH . 
E 4 HOH A 46 246 90 HOH HOH . 
E 4 HOH A 47 247 50 HOH HOH . 
E 4 HOH A 48 248 32 HOH HOH . 
E 4 HOH A 49 249 74 HOH HOH . 
E 4 HOH A 50 250 69 HOH HOH . 
E 4 HOH A 51 251 103 HOH HOH . 
E 4 HOH A 52 252 44 HOH HOH . 
E 4 HOH A 53 253 151 HOH HOH . 
E 4 HOH A 54 254 170 HOH HOH . 
E 4 HOH A 55 255 19 HOH HOH . 
E 4 HOH A 56 256 88 HOH HOH . 
E 4 HOH A 57 257 29 HOH HOH . 
E 4 HOH A 58 258 70 HOH HOH . 
E 4 HOH A 59 259 177 HOH HOH . 
E 4 HOH A 60 260 5 HOH HOH . 
E 4 HOH A 61 261 157 HOH HOH . 
E 4 HOH A 62 262 113 HOH HOH . 
E 4 HOH A 63 263 112 HOH HOH . 
E 4 HOH A 64 264 66 HOH HOH . 
E 4 HOH A 65 265 135 HOH HOH . 
E 4 HOH A 66 266 122 HOH HOH . 
E 4 HOH A 67 267 149 HOH HOH . 
E 4 HOH A 68 268 201 HOH HOH . 
E 4 HOH A 69 269 111 HOH HOH . 
E 4 HOH A 70 270 110 HOH HOH . 
E 4 HOH A 71 271 147 HOH HOH . 
E 4 HOH A 72 272 100 HOH HOH . 
E 4 HOH A 73 273 98 HOH HOH . 
E 4 HOH A 74 274 76 HOH HOH . 
E 4 HOH A 75 275 101 HOH HOH . 
E 4 HOH A 76 276 92 HOH HOH . 
E 4 HOH A 77 277 134 HOH HOH . 
E 4 HOH A 78 278 158 HOH HOH . 
E 4 HOH A 79 279 208 HOH HOH . 
E 4 HOH A 80 280 171 HOH HOH . 
E 4 HOH A 81 281 199 HOH HOH . 
E 4 HOH A 82 282 154 HOH HOH . 
E 4 HOH A 83 283 178 HOH HOH . 
E 4 HOH A 84 284 164 HOH HOH . 
E 4 HOH A 85 285 191 HOH HOH . 
E 4 HOH A 86 286 196 HOH HOH . 
E 4 HOH A 87 287 185 HOH HOH . 
E 4 HOH A 88 288 182 HOH HOH . 
E 4 HOH A 89 289 59 HOH HOH . 
E 4 HOH A 90 290 120 HOH HOH . 
E 4 HOH A 91 291 148 HOH HOH . 
E 4 HOH A 92 292 212 HOH HOH . 
E 4 HOH A 93 293 210 HOH HOH . 
E 4 HOH A 94 294 139 HOH HOH . 
E 4 HOH A 95 295 166 HOH HOH . 
E 4 HOH A 96 296 180 HOH HOH . 
E 4 HOH A 97 297 184 HOH HOH . 
E 4 HOH A 98 298 127 HOH HOH . 
E 4 HOH A 99 299 194 HOH HOH . 
E 4 HOH A 100 300 160 HOH HOH . 
E 4 HOH A 101 301 198 HOH HOH . 
E 4 HOH A 102 302 175 HOH HOH . 
E 4 HOH A 103 303 195 HOH HOH . 
E 4 HOH A 104 304 203 HOH HOH . 
F 4 HOH B 1 201 40 HOH HOH . 
F 4 HOH B 2 202 54 HOH HOH . 
F 4 HOH B 3 203 211 HOH HOH . 
F 4 HOH B 4 204 89 HOH HOH . 
F 4 HOH B 5 205 56 HOH HOH . 
F 4 HOH B 6 206 159 HOH HOH . 
F 4 HOH B 7 207 205 HOH HOH . 
F 4 HOH B 8 208 162 HOH HOH . 
F 4 HOH B 9 209 77 HOH HOH . 
F 4 HOH B 10 210 197 HOH HOH . 
F 4 HOH B 11 211 60 HOH HOH . 
F 4 HOH B 12 212 30 HOH HOH . 
F 4 HOH B 13 213 6 HOH HOH . 
F 4 HOH B 14 214 33 HOH HOH . 
F 4 HOH B 15 215 39 HOH HOH . 
F 4 HOH B 16 216 78 HOH HOH . 
F 4 HOH B 17 217 71 HOH HOH . 
F 4 HOH B 18 218 144 HOH HOH . 
F 4 HOH B 19 219 13 HOH HOH . 
F 4 HOH B 20 220 9 HOH HOH . 
F 4 HOH B 21 221 31 HOH HOH . 
F 4 HOH B 22 222 114 HOH HOH . 
F 4 HOH B 23 223 46 HOH HOH . 
F 4 HOH B 24 224 104 HOH HOH . 
F 4 HOH B 25 225 79 HOH HOH . 
F 4 HOH B 26 226 51 HOH HOH . 
F 4 HOH B 27 227 10 HOH HOH . 
F 4 HOH B 28 228 27 HOH HOH . 
F 4 HOH B 29 229 125 HOH HOH . 
F 4 HOH B 30 230 36 HOH HOH . 
F 4 HOH B 31 231 38 HOH HOH . 
F 4 HOH B 32 232 86 HOH HOH . 
F 4 HOH B 33 233 138 HOH HOH . 
F 4 HOH B 34 234 8 HOH HOH . 
F 4 HOH B 35 235 84 HOH HOH . 
F 4 HOH B 36 236 4 HOH HOH . 
F 4 HOH B 37 237 23 HOH HOH . 
F 4 HOH B 38 238 130 HOH HOH . 
F 4 HOH B 39 239 68 HOH HOH . 
F 4 HOH B 40 240 64 HOH HOH . 
F 4 HOH B 41 241 52 HOH HOH . 
F 4 HOH B 42 242 143 HOH HOH . 
F 4 HOH B 43 243 187 HOH HOH . 
F 4 HOH B 44 244 123 HOH HOH . 
F 4 HOH B 45 245 186 HOH HOH . 
F 4 HOH B 46 246 45 HOH HOH . 
F 4 HOH B 47 247 49 HOH HOH . 
F 4 HOH B 48 248 37 HOH HOH . 
F 4 HOH B 49 249 117 HOH HOH . 
F 4 HOH B 50 250 83 HOH HOH . 
F 4 HOH B 51 251 35 HOH HOH . 
F 4 HOH B 52 252 93 HOH HOH . 
F 4 HOH B 53 253 14 HOH HOH . 
F 4 HOH B 54 254 107 HOH HOH . 
F 4 HOH B 55 255 57 HOH HOH . 
F 4 HOH B 56 256 17 HOH HOH . 
F 4 HOH B 57 257 109 HOH HOH . 
F 4 HOH B 58 258 207 HOH HOH . 
F 4 HOH B 59 259 25 HOH HOH . 
F 4 HOH B 60 260 156 HOH HOH . 
F 4 HOH B 61 261 81 HOH HOH . 
F 4 HOH B 62 262 42 HOH HOH . 
F 4 HOH B 63 263 126 HOH HOH . 
F 4 HOH B 64 264 67 HOH HOH . 
F 4 HOH B 65 265 129 HOH HOH . 
F 4 HOH B 66 266 136 HOH HOH . 
F 4 HOH B 67 267 1 HOH HOH . 
F 4 HOH B 68 268 91 HOH HOH . 
F 4 HOH B 69 269 213 HOH HOH . 
F 4 HOH B 70 270 119 HOH HOH . 
F 4 HOH B 71 271 192 HOH HOH . 
F 4 HOH B 72 272 2 HOH HOH . 
F 4 HOH B 73 273 21 HOH HOH . 
F 4 HOH B 74 274 176 HOH HOH . 
F 4 HOH B 75 275 63 HOH HOH . 
F 4 HOH B 76 276 209 HOH HOH . 
F 4 HOH B 77 277 165 HOH HOH . 
F 4 HOH B 78 278 179 HOH HOH . 
F 4 HOH B 79 279 200 HOH HOH . 
F 4 HOH B 80 280 173 HOH HOH . 
F 4 HOH B 81 281 43 HOH HOH . 
F 4 HOH B 82 282 204 HOH HOH . 
F 4 HOH B 83 283 172 HOH HOH . 
F 4 HOH B 84 284 121 HOH HOH . 
F 4 HOH B 85 285 142 HOH HOH . 
F 4 HOH B 86 286 202 HOH HOH . 
F 4 HOH B 87 287 189 HOH HOH . 
F 4 HOH B 88 288 168 HOH HOH . 
F 4 HOH B 89 289 140 HOH HOH . 
F 4 HOH B 90 290 116 HOH HOH . 
F 4 HOH B 91 291 99 HOH HOH . 
F 4 HOH B 92 292 106 HOH HOH . 
F 4 HOH B 93 293 137 HOH HOH . 
F 4 HOH B 94 294 72 HOH HOH . 
F 4 HOH B 95 295 150 HOH HOH . 
F 4 HOH B 96 296 183 HOH HOH . 
F 4 HOH B 97 297 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -27.322 6.984 -31.811 1 37.21 ? C1 GOL 101 B 1 
HETATM 2 O O1 GOL . . . D 3 -27.525 7.088 -33.213 1 37.49 ? O1 GOL 101 B 1 
HETATM 3 C C2 GOL . . . D 3 -26.908 5.569 -31.411 1 29.5 ? C2 GOL 101 B 1 
HETATM 4 O O2 GOL . . . D 3 -25.69 5.272 -32.046 1 38.65 ? O2 GOL 101 B 1 
HETATM 5 C C3 GOL . . . D 3 -26.712 5.418 -29.9 1 32.44 ? C3 GOL 101 B 1 
HETATM 6 O O3 GOL . . . D 3 -27.922 5.357 -29.18 1 31.74 ? O3 GOL 101 B 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#