data_5KR8
#
_model_server_result.job_id            60_gvXqUnvlNlyWCm1svFA 
_model_server_result.datetime_utc      '2024-11-08 18:56:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kr8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    5KR8 
#
_exptl.entry_id    5KR8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5KR8 
_cell.length_a            102.059 
_cell.length_b            102.059 
_cell.length_c            170.843 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KR8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 217 A CYS 203 1_555 A SG CYS 421 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 279 A CYS 265 1_555 A SG CYS 444 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5KR8 
_atom_sites.fract_transf_matrix[1][1]    0.009798 
_atom_sites.fract_transf_matrix[1][2]    0.005657 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005853 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 IOD A 1 501 1 IOD IOD . 
C 3 6WE A 1 502 1 6WE LG1 . 
D 4 HOH A 1 601 59 HOH HOH . 
D 4 HOH A 2 602 118 HOH HOH . 
D 4 HOH A 3 603 74 HOH HOH . 
D 4 HOH A 4 604 109 HOH HOH . 
D 4 HOH A 5 605 54 HOH HOH . 
D 4 HOH A 6 606 47 HOH HOH . 
D 4 HOH A 7 607 20 HOH HOH . 
D 4 HOH A 8 608 34 HOH HOH . 
D 4 HOH A 9 609 10 HOH HOH . 
D 4 HOH A 10 610 26 HOH HOH . 
D 4 HOH A 11 611 14 HOH HOH . 
D 4 HOH A 12 612 42 HOH HOH . 
D 4 HOH A 13 613 7 HOH HOH . 
D 4 HOH A 14 614 4 HOH HOH . 
D 4 HOH A 15 615 8 HOH HOH . 
D 4 HOH A 16 616 63 HOH HOH . 
D 4 HOH A 17 617 73 HOH HOH . 
D 4 HOH A 18 618 6 HOH HOH . 
D 4 HOH A 19 619 24 HOH HOH . 
D 4 HOH A 20 620 16 HOH HOH . 
D 4 HOH A 21 621 25 HOH HOH . 
D 4 HOH A 22 622 107 HOH HOH . 
D 4 HOH A 23 623 18 HOH HOH . 
D 4 HOH A 24 624 83 HOH HOH . 
D 4 HOH A 25 625 9 HOH HOH . 
D 4 HOH A 26 626 68 HOH HOH . 
D 4 HOH A 27 627 82 HOH HOH . 
D 4 HOH A 28 628 92 HOH HOH . 
D 4 HOH A 29 629 48 HOH HOH . 
D 4 HOH A 30 630 76 HOH HOH . 
D 4 HOH A 31 631 28 HOH HOH . 
D 4 HOH A 32 632 40 HOH HOH . 
D 4 HOH A 33 633 67 HOH HOH . 
D 4 HOH A 34 634 105 HOH HOH . 
D 4 HOH A 35 635 98 HOH HOH . 
D 4 HOH A 36 636 86 HOH HOH . 
D 4 HOH A 37 637 19 HOH HOH . 
D 4 HOH A 38 638 56 HOH HOH . 
D 4 HOH A 39 639 102 HOH HOH . 
D 4 HOH A 40 640 62 HOH HOH . 
D 4 HOH A 41 641 39 HOH HOH . 
D 4 HOH A 42 642 84 HOH HOH . 
D 4 HOH A 43 643 55 HOH HOH . 
D 4 HOH A 44 644 22 HOH HOH . 
D 4 HOH A 45 645 13 HOH HOH . 
D 4 HOH A 46 646 49 HOH HOH . 
D 4 HOH A 47 647 104 HOH HOH . 
D 4 HOH A 48 648 11 HOH HOH . 
D 4 HOH A 49 649 52 HOH HOH . 
D 4 HOH A 50 650 117 HOH HOH . 
D 4 HOH A 51 651 36 HOH HOH . 
D 4 HOH A 52 652 31 HOH HOH . 
D 4 HOH A 53 653 12 HOH HOH . 
D 4 HOH A 54 654 15 HOH HOH . 
D 4 HOH A 55 655 38 HOH HOH . 
D 4 HOH A 56 656 41 HOH HOH . 
D 4 HOH A 57 657 58 HOH HOH . 
D 4 HOH A 58 658 21 HOH HOH . 
D 4 HOH A 59 659 71 HOH HOH . 
D 4 HOH A 60 660 100 HOH HOH . 
D 4 HOH A 61 661 43 HOH HOH . 
D 4 HOH A 62 662 27 HOH HOH . 
D 4 HOH A 63 663 72 HOH HOH . 
D 4 HOH A 64 664 87 HOH HOH . 
D 4 HOH A 65 665 46 HOH HOH . 
D 4 HOH A 66 666 94 HOH HOH . 
D 4 HOH A 67 667 37 HOH HOH . 
D 4 HOH A 68 668 30 HOH HOH . 
D 4 HOH A 69 669 57 HOH HOH . 
D 4 HOH A 70 670 64 HOH HOH . 
D 4 HOH A 71 671 61 HOH HOH . 
D 4 HOH A 72 672 51 HOH HOH . 
D 4 HOH A 73 673 85 HOH HOH . 
D 4 HOH A 74 674 70 HOH HOH . 
D 4 HOH A 75 675 110 HOH HOH . 
D 4 HOH A 76 676 23 HOH HOH . 
D 4 HOH A 77 677 88 HOH HOH . 
D 4 HOH A 78 678 111 HOH HOH . 
D 4 HOH A 79 679 44 HOH HOH . 
D 4 HOH A 80 680 33 HOH HOH . 
D 4 HOH A 81 681 113 HOH HOH . 
D 4 HOH A 82 682 66 HOH HOH . 
D 4 HOH A 83 683 69 HOH HOH . 
D 4 HOH A 84 684 93 HOH HOH . 
D 4 HOH A 85 685 35 HOH HOH . 
D 4 HOH A 86 686 75 HOH HOH . 
D 4 HOH A 87 687 108 HOH HOH . 
D 4 HOH A 88 688 53 HOH HOH . 
D 4 HOH A 89 689 1 HOH HOH . 
D 4 HOH A 90 690 77 HOH HOH . 
D 4 HOH A 91 691 116 HOH HOH . 
D 4 HOH A 92 692 50 HOH HOH . 
D 4 HOH A 93 693 103 HOH HOH . 
D 4 HOH A 94 694 29 HOH HOH . 
D 4 HOH A 95 695 32 HOH HOH . 
D 4 HOH A 96 696 17 HOH HOH . 
D 4 HOH A 97 697 5 HOH HOH . 
D 4 HOH A 98 698 60 HOH HOH . 
D 4 HOH A 99 699 45 HOH HOH . 
D 4 HOH A 100 700 2 HOH HOH . 
D 4 HOH A 101 701 115 HOH HOH . 
D 4 HOH A 102 702 3 HOH HOH . 
D 4 HOH A 103 703 80 HOH HOH . 
D 4 HOH A 104 704 81 HOH HOH . 
D 4 HOH A 105 705 79 HOH HOH . 
D 4 HOH A 106 706 101 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               28.489 
_atom_site.Cartn_y               31.011 
_atom_site.Cartn_z               -15.637 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        96.19 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#