data_5KR8 # _model_server_result.job_id MayQW5Qa5yB0-8ssD4e7Pg _model_server_result.datetime_utc '2024-11-22 02:27:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5KR8 # _exptl.entry_id 5KR8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.387 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5KR8 _cell.length_a 102.059 _cell.length_b 102.059 _cell.length_c 170.843 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 217 A CYS 203 1_555 A SG CYS 421 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 279 A CYS 265 1_555 A SG CYS 444 A CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C16 H17 F2 N3 O S' _chem_comp.formula_weight 337.387 _chem_comp.id 6WE _chem_comp.mon_nstd_flag . _chem_comp.name (4~{S},6~{S})-4-[2,4-bis(fluoranyl)phenyl]-6-(3,5-dimethyl-1,2-oxazol-4-yl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N6 O5 6WE sing 1 n y N6 C2 6WE doub 2 n y O5 C4 6WE sing 3 n y C2 C1 6WE sing 4 n n C2 C3 6WE sing 5 n y C4 C7 6WE sing 6 n n C4 C3 6WE doub 7 n y C3 C8 6WE sing 8 n n F22 C21 6WE sing 9 n n C9 C8 6WE sing 10 n n C9 C10 6WE sing 11 n n C8 S13 6WE sing 12 n n C21 C20 6WE doub 13 n y C21 C16 6WE sing 14 n y C15 C10 6WE sing 15 n n C10 C16 6WE sing 16 n n C10 N11 6WE sing 17 n n C20 C19 6WE sing 18 n y C16 C17 6WE doub 19 n y S13 C12 6WE sing 20 n n N11 C12 6WE doub 21 n n C19 F23 6WE sing 22 n n C19 C18 6WE doub 23 n y C12 N14 6WE sing 24 n n C17 C18 6WE sing 25 n y N14 H1 6WE sing 26 n n N14 H2 6WE sing 27 n n C18 H3 6WE sing 28 n n C17 H4 6WE sing 29 n n C15 H5 6WE sing 30 n n C15 H6 6WE sing 31 n n C15 H7 6WE sing 32 n n C20 H8 6WE sing 33 n n C1 H9 6WE sing 34 n n C1 H10 6WE sing 35 n n C1 H11 6WE sing 36 n n C7 H12 6WE sing 37 n n C7 H13 6WE sing 38 n n C7 H14 6WE sing 39 n n C8 H15 6WE sing 40 n n C9 H16 6WE sing 41 n n C9 H17 6WE sing 42 n n # _atom_sites.entry_id 5KR8 _atom_sites.fract_transf_matrix[1][1] 0.009798 _atom_sites.fract_transf_matrix[1][2] 0.005657 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 501 1 IOD IOD . C 3 6WE A 1 502 1 6WE LG1 . D 4 HOH A 1 601 59 HOH HOH . D 4 HOH A 2 602 118 HOH HOH . D 4 HOH A 3 603 74 HOH HOH . D 4 HOH A 4 604 109 HOH HOH . D 4 HOH A 5 605 54 HOH HOH . D 4 HOH A 6 606 47 HOH HOH . D 4 HOH A 7 607 20 HOH HOH . D 4 HOH A 8 608 34 HOH HOH . D 4 HOH A 9 609 10 HOH HOH . D 4 HOH A 10 610 26 HOH HOH . D 4 HOH A 11 611 14 HOH HOH . D 4 HOH A 12 612 42 HOH HOH . D 4 HOH A 13 613 7 HOH HOH . D 4 HOH A 14 614 4 HOH HOH . D 4 HOH A 15 615 8 HOH HOH . D 4 HOH A 16 616 63 HOH HOH . D 4 HOH A 17 617 73 HOH HOH . D 4 HOH A 18 618 6 HOH HOH . D 4 HOH A 19 619 24 HOH HOH . D 4 HOH A 20 620 16 HOH HOH . D 4 HOH A 21 621 25 HOH HOH . D 4 HOH A 22 622 107 HOH HOH . D 4 HOH A 23 623 18 HOH HOH . D 4 HOH A 24 624 83 HOH HOH . D 4 HOH A 25 625 9 HOH HOH . D 4 HOH A 26 626 68 HOH HOH . D 4 HOH A 27 627 82 HOH HOH . D 4 HOH A 28 628 92 HOH HOH . D 4 HOH A 29 629 48 HOH HOH . D 4 HOH A 30 630 76 HOH HOH . D 4 HOH A 31 631 28 HOH HOH . D 4 HOH A 32 632 40 HOH HOH . D 4 HOH A 33 633 67 HOH HOH . D 4 HOH A 34 634 105 HOH HOH . D 4 HOH A 35 635 98 HOH HOH . D 4 HOH A 36 636 86 HOH HOH . D 4 HOH A 37 637 19 HOH HOH . D 4 HOH A 38 638 56 HOH HOH . D 4 HOH A 39 639 102 HOH HOH . D 4 HOH A 40 640 62 HOH HOH . D 4 HOH A 41 641 39 HOH HOH . D 4 HOH A 42 642 84 HOH HOH . D 4 HOH A 43 643 55 HOH HOH . D 4 HOH A 44 644 22 HOH HOH . D 4 HOH A 45 645 13 HOH HOH . D 4 HOH A 46 646 49 HOH HOH . D 4 HOH A 47 647 104 HOH HOH . D 4 HOH A 48 648 11 HOH HOH . D 4 HOH A 49 649 52 HOH HOH . D 4 HOH A 50 650 117 HOH HOH . D 4 HOH A 51 651 36 HOH HOH . D 4 HOH A 52 652 31 HOH HOH . D 4 HOH A 53 653 12 HOH HOH . D 4 HOH A 54 654 15 HOH HOH . D 4 HOH A 55 655 38 HOH HOH . D 4 HOH A 56 656 41 HOH HOH . D 4 HOH A 57 657 58 HOH HOH . D 4 HOH A 58 658 21 HOH HOH . D 4 HOH A 59 659 71 HOH HOH . D 4 HOH A 60 660 100 HOH HOH . D 4 HOH A 61 661 43 HOH HOH . D 4 HOH A 62 662 27 HOH HOH . D 4 HOH A 63 663 72 HOH HOH . D 4 HOH A 64 664 87 HOH HOH . D 4 HOH A 65 665 46 HOH HOH . D 4 HOH A 66 666 94 HOH HOH . D 4 HOH A 67 667 37 HOH HOH . D 4 HOH A 68 668 30 HOH HOH . D 4 HOH A 69 669 57 HOH HOH . D 4 HOH A 70 670 64 HOH HOH . D 4 HOH A 71 671 61 HOH HOH . D 4 HOH A 72 672 51 HOH HOH . D 4 HOH A 73 673 85 HOH HOH . D 4 HOH A 74 674 70 HOH HOH . D 4 HOH A 75 675 110 HOH HOH . D 4 HOH A 76 676 23 HOH HOH . D 4 HOH A 77 677 88 HOH HOH . D 4 HOH A 78 678 111 HOH HOH . D 4 HOH A 79 679 44 HOH HOH . D 4 HOH A 80 680 33 HOH HOH . D 4 HOH A 81 681 113 HOH HOH . D 4 HOH A 82 682 66 HOH HOH . D 4 HOH A 83 683 69 HOH HOH . D 4 HOH A 84 684 93 HOH HOH . D 4 HOH A 85 685 35 HOH HOH . D 4 HOH A 86 686 75 HOH HOH . D 4 HOH A 87 687 108 HOH HOH . D 4 HOH A 88 688 53 HOH HOH . D 4 HOH A 89 689 1 HOH HOH . D 4 HOH A 90 690 77 HOH HOH . D 4 HOH A 91 691 116 HOH HOH . D 4 HOH A 92 692 50 HOH HOH . D 4 HOH A 93 693 103 HOH HOH . D 4 HOH A 94 694 29 HOH HOH . D 4 HOH A 95 695 32 HOH HOH . D 4 HOH A 96 696 17 HOH HOH . D 4 HOH A 97 697 5 HOH HOH . D 4 HOH A 98 698 60 HOH HOH . D 4 HOH A 99 699 45 HOH HOH . D 4 HOH A 100 700 2 HOH HOH . D 4 HOH A 101 701 115 HOH HOH . D 4 HOH A 102 702 3 HOH HOH . D 4 HOH A 103 703 80 HOH HOH . D 4 HOH A 104 704 81 HOH HOH . D 4 HOH A 105 705 79 HOH HOH . D 4 HOH A 106 706 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N14 6WE . . . C 3 14.928 40.054 -6.258 1 29.15 ? N14 6WE 502 A 1 HETATM 2 C C18 6WE . . . C 3 20.225 39.451 -6.575 1 30.42 ? C18 6WE 502 A 1 HETATM 3 C C17 6WE . . . C 3 18.923 39.249 -7.024 1 29.15 ? C17 6WE 502 A 1 HETATM 4 C C16 6WE . . . C 3 18.64 38.858 -8.335 1 32.66 ? C16 6WE 502 A 1 HETATM 5 C C15 6WE . . . C 3 16.99 37.203 -9.197 1 27.61 ? C15 6WE 502 A 1 HETATM 6 C C19 6WE . . . C 3 21.288 39.26 -7.453 1 32.37 ? C19 6WE 502 A 1 HETATM 7 C C20 6WE . . . C 3 21.032 38.874 -8.766 1 27.54 ? C20 6WE 502 A 1 HETATM 8 C C21 6WE . . . C 3 19.725 38.673 -9.211 1 31.66 ? C21 6WE 502 A 1 HETATM 9 C C12 6WE . . . C 3 15.652 39.986 -7.382 1 30.57 ? C12 6WE 502 A 1 HETATM 10 C C1 6WE . . . C 3 14.145 41.217 -11.345 1 37.6 ? C1 6WE 502 A 1 HETATM 11 C C2 6WE . . . C 3 15.441 41.954 -11.606 1 36.83 ? C2 6WE 502 A 1 HETATM 12 C C3 6WE . . . C 3 16.648 41.877 -10.897 1 33.78 ? C3 6WE 502 A 1 HETATM 13 C C4 6WE . . . C 3 17.546 42.74 -11.524 1 37.97 ? C4 6WE 502 A 1 HETATM 14 O O5 6WE . . . C 3 16.954 43.305 -12.53 1 41.08 ? O5 6WE 502 A 1 HETATM 15 N N6 6WE . . . C 3 15.63 42.833 -12.613 1 38.22 ? N6 6WE 502 A 1 HETATM 16 C C7 6WE . . . C 3 18.98 42.99 -11.111 1 36.87 ? C7 6WE 502 A 1 HETATM 17 C C8 6WE . . . C 3 16.981 41.035 -9.676 1 33.62 ? C8 6WE 502 A 1 HETATM 18 C C9 6WE . . . C 3 16.842 39.537 -9.982 1 26.77 ? C9 6WE 502 A 1 HETATM 19 C C10 6WE . . . C 3 17.193 38.659 -8.773 1 29.91 ? C10 6WE 502 A 1 HETATM 20 N N11 6WE . . . C 3 16.255 38.885 -7.666 1 27.01 ? N11 6WE 502 A 1 HETATM 21 S S13 6WE . . . C 3 15.906 41.467 -8.304 1 33.85 ? S13 6WE 502 A 1 HETATM 22 F F22 6WE . . . C 3 19.549 38.303 -10.487 1 34.75 ? F22 6WE 502 A 1 HETATM 23 F F23 6WE . . . C 3 22.54 39.452 -7.018 1 37.42 ? F23 6WE 502 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #