data_5KRE
#
_model_server_result.job_id            lsfkYqYggcduVGdvkTaEnA 
_model_server_result.datetime_utc      '2025-07-12 21:02:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kre 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    5KRE 
#
_exptl.entry_id    5KRE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KRE 
_cell.length_a            47.41 
_cell.length_b            61.44 
_cell.length_c            75.98 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KRE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OG 
_struct_conn.ptnr1_label_comp_id            SER 
_struct_conn.ptnr1_label_seq_id             126 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SER 
_struct_conn.ptnr1_auth_seq_id              124 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C12 
_struct_conn.ptnr2_label_comp_id            6WG 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             6WG 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.418 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 267 n n 
N O2 NO3 sing 268 n n 
N O3 NO3 sing 269 n n 
#
_atom_sites.entry_id                     5KRE 
_atom_sites.fract_transf_matrix[1][1]    0.021093 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016276 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013161 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 6WG A 1 301 1 6WG PFE . 
C 3 NO3 A 1 302 1 NO3 NO3 . 
D 4 HOH A 1 401 18 HOH HOH . 
D 4 HOH A 2 402 44 HOH HOH . 
D 4 HOH A 3 403 46 HOH HOH . 
D 4 HOH A 4 404 67 HOH HOH . 
D 4 HOH A 5 405 130 HOH HOH . 
D 4 HOH A 6 406 16 HOH HOH . 
D 4 HOH A 7 407 73 HOH HOH . 
D 4 HOH A 8 408 23 HOH HOH . 
D 4 HOH A 9 409 115 HOH HOH . 
D 4 HOH A 10 410 17 HOH HOH . 
D 4 HOH A 11 411 118 HOH HOH . 
D 4 HOH A 12 412 123 HOH HOH . 
D 4 HOH A 13 413 12 HOH HOH . 
D 4 HOH A 14 414 111 HOH HOH . 
D 4 HOH A 15 415 42 HOH HOH . 
D 4 HOH A 16 416 30 HOH HOH . 
D 4 HOH A 17 417 122 HOH HOH . 
D 4 HOH A 18 418 59 HOH HOH . 
D 4 HOH A 19 419 4 HOH HOH . 
D 4 HOH A 20 420 129 HOH HOH . 
D 4 HOH A 21 421 106 HOH HOH . 
D 4 HOH A 22 422 32 HOH HOH . 
D 4 HOH A 23 423 25 HOH HOH . 
D 4 HOH A 24 424 24 HOH HOH . 
D 4 HOH A 25 425 21 HOH HOH . 
D 4 HOH A 26 426 13 HOH HOH . 
D 4 HOH A 27 427 1 HOH HOH . 
D 4 HOH A 28 428 27 HOH HOH . 
D 4 HOH A 29 429 56 HOH HOH . 
D 4 HOH A 30 430 15 HOH HOH . 
D 4 HOH A 31 431 142 HOH HOH . 
D 4 HOH A 32 432 143 HOH HOH . 
D 4 HOH A 33 433 92 HOH HOH . 
D 4 HOH A 34 434 36 HOH HOH . 
D 4 HOH A 35 435 97 HOH HOH . 
D 4 HOH A 36 436 74 HOH HOH . 
D 4 HOH A 37 437 85 HOH HOH . 
D 4 HOH A 38 438 29 HOH HOH . 
D 4 HOH A 39 439 117 HOH HOH . 
D 4 HOH A 40 440 103 HOH HOH . 
D 4 HOH A 41 441 87 HOH HOH . 
D 4 HOH A 42 442 37 HOH HOH . 
D 4 HOH A 43 443 35 HOH HOH . 
D 4 HOH A 44 444 78 HOH HOH . 
D 4 HOH A 45 445 138 HOH HOH . 
D 4 HOH A 46 446 69 HOH HOH . 
D 4 HOH A 47 447 100 HOH HOH . 
D 4 HOH A 48 448 34 HOH HOH . 
D 4 HOH A 49 449 70 HOH HOH . 
D 4 HOH A 50 450 116 HOH HOH . 
D 4 HOH A 51 451 109 HOH HOH . 
D 4 HOH A 52 452 120 HOH HOH . 
D 4 HOH A 53 453 90 HOH HOH . 
D 4 HOH A 54 454 7 HOH HOH . 
D 4 HOH A 55 455 14 HOH HOH . 
D 4 HOH A 56 456 61 HOH HOH . 
D 4 HOH A 57 457 38 HOH HOH . 
D 4 HOH A 58 458 10 HOH HOH . 
D 4 HOH A 59 459 50 HOH HOH . 
D 4 HOH A 60 460 136 HOH HOH . 
D 4 HOH A 61 461 132 HOH HOH . 
D 4 HOH A 62 462 20 HOH HOH . 
D 4 HOH A 63 463 80 HOH HOH . 
D 4 HOH A 64 464 49 HOH HOH . 
D 4 HOH A 65 465 144 HOH HOH . 
D 4 HOH A 66 466 33 HOH HOH . 
D 4 HOH A 67 467 145 HOH HOH . 
D 4 HOH A 68 468 127 HOH HOH . 
D 4 HOH A 69 469 82 HOH HOH . 
D 4 HOH A 70 470 86 HOH HOH . 
D 4 HOH A 71 471 62 HOH HOH . 
D 4 HOH A 72 472 3 HOH HOH . 
D 4 HOH A 73 473 39 HOH HOH . 
D 4 HOH A 74 474 51 HOH HOH . 
D 4 HOH A 75 475 52 HOH HOH . 
D 4 HOH A 76 476 95 HOH HOH . 
D 4 HOH A 77 477 11 HOH HOH . 
D 4 HOH A 78 478 54 HOH HOH . 
D 4 HOH A 79 479 81 HOH HOH . 
D 4 HOH A 80 480 26 HOH HOH . 
D 4 HOH A 81 481 77 HOH HOH . 
D 4 HOH A 82 482 119 HOH HOH . 
D 4 HOH A 83 483 8 HOH HOH . 
D 4 HOH A 84 484 108 HOH HOH . 
D 4 HOH A 85 485 68 HOH HOH . 
D 4 HOH A 86 486 128 HOH HOH . 
D 4 HOH A 87 487 31 HOH HOH . 
D 4 HOH A 88 488 91 HOH HOH . 
D 4 HOH A 89 489 102 HOH HOH . 
D 4 HOH A 90 490 66 HOH HOH . 
D 4 HOH A 91 491 57 HOH HOH . 
D 4 HOH A 92 492 48 HOH HOH . 
D 4 HOH A 93 493 63 HOH HOH . 
D 4 HOH A 94 494 89 HOH HOH . 
D 4 HOH A 95 495 45 HOH HOH . 
D 4 HOH A 96 496 9 HOH HOH . 
D 4 HOH A 97 497 153 HOH HOH . 
D 4 HOH A 98 498 65 HOH HOH . 
D 4 HOH A 99 499 47 HOH HOH . 
D 4 HOH A 100 500 107 HOH HOH . 
D 4 HOH A 101 501 6 HOH HOH . 
D 4 HOH A 102 502 64 HOH HOH . 
D 4 HOH A 103 503 60 HOH HOH . 
D 4 HOH A 104 504 2 HOH HOH . 
D 4 HOH A 105 505 124 HOH HOH . 
D 4 HOH A 106 506 5 HOH HOH . 
D 4 HOH A 107 507 22 HOH HOH . 
D 4 HOH A 108 508 112 HOH HOH . 
D 4 HOH A 109 509 75 HOH HOH . 
D 4 HOH A 110 510 19 HOH HOH . 
D 4 HOH A 111 511 88 HOH HOH . 
D 4 HOH A 112 512 40 HOH HOH . 
D 4 HOH A 113 513 41 HOH HOH . 
D 4 HOH A 114 514 101 HOH HOH . 
D 4 HOH A 115 515 84 HOH HOH . 
D 4 HOH A 116 516 150 HOH HOH . 
D 4 HOH A 117 517 53 HOH HOH . 
D 4 HOH A 118 518 96 HOH HOH . 
D 4 HOH A 119 519 151 HOH HOH . 
D 4 HOH A 120 520 154 HOH HOH . 
D 4 HOH A 121 521 134 HOH HOH . 
D 4 HOH A 122 522 146 HOH HOH . 
D 4 HOH A 123 523 55 HOH HOH . 
D 4 HOH A 124 524 83 HOH HOH . 
D 4 HOH A 125 525 72 HOH HOH . 
D 4 HOH A 126 526 125 HOH HOH . 
D 4 HOH A 127 527 93 HOH HOH . 
D 4 HOH A 128 528 113 HOH HOH . 
D 4 HOH A 129 529 76 HOH HOH . 
D 4 HOH A 130 530 148 HOH HOH . 
D 4 HOH A 131 531 141 HOH HOH . 
D 4 HOH A 132 532 135 HOH HOH . 
D 4 HOH A 133 533 133 HOH HOH . 
D 4 HOH A 134 534 114 HOH HOH . 
D 4 HOH A 135 535 79 HOH HOH . 
D 4 HOH A 136 536 139 HOH HOH . 
D 4 HOH A 137 537 43 HOH HOH . 
D 4 HOH A 138 538 147 HOH HOH . 
D 4 HOH A 139 539 149 HOH HOH . 
D 4 HOH A 140 540 137 HOH HOH . 
D 4 HOH A 141 541 110 HOH HOH . 
D 4 HOH A 142 542 131 HOH HOH . 
D 4 HOH A 143 543 105 HOH HOH . 
D 4 HOH A 144 544 71 HOH HOH . 
D 4 HOH A 145 545 99 HOH HOH . 
D 4 HOH A 146 546 58 HOH HOH . 
D 4 HOH A 147 547 152 HOH HOH . 
D 4 HOH A 148 548 98 HOH HOH . 
D 4 HOH A 149 549 104 HOH HOH . 
D 4 HOH A 150 550 121 HOH HOH . 
D 4 HOH A 151 551 94 HOH HOH . 
D 4 HOH A 152 552 126 HOH HOH . 
D 4 HOH A 153 553 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . C 3 23.506 39.862 31.097 1 32.56 ? N NO3 302 A 1 
HETATM 2 O O1 NO3 . . . C 3 24.079 39.25 31.969 1 29.69 ? O1 NO3 302 A 1 
HETATM 3 O O2 NO3 . . . C 3 22.321 40.131 31.119 1 35.13 ? O2 NO3 302 A 1 
HETATM 4 O O3 NO3 . . . C 3 24.205 40.252 30.057 1 32.16 ? O3 NO3 302 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#