data_5KRK # _model_server_result.job_id lytxeGgIXdiCOLVHKs46hg _model_server_result.datetime_utc '2024-11-25 11:32:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5krk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5KRK # _exptl.entry_id 5KRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 393.273 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(5-bromanyl-2,3-dihydroinden-1-ylidene)-(4-hydroxyphenyl)methyl]phenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.92 _cell.angle_gamma 90 _cell.entry_id 5KRK _cell.length_a 54.02 _cell.length_b 81.73 _cell.length_c 58.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C22 H17 Br O2' _chem_comp.formula_weight 393.273 _chem_comp.id 6WQ _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(5-bromanyl-2,3-dihydroinden-1-ylidene)-(4-hydroxyphenyl)methyl]phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR C21 6WQ sing 1 n n C21 C23 6WQ doub 2 n y C21 C20 6WQ sing 3 n y C23 C17 6WQ sing 4 n y C20 C19 6WQ doub 5 n y C17 C18 6WQ doub 6 n y C17 C16 6WQ sing 7 n n C19 C18 6WQ sing 8 n y C18 C14 6WQ sing 9 n n C16 C15 6WQ sing 10 n n C15 C14 6WQ sing 11 n n C14 C06 6WQ doub 12 n n C24 C25 6WQ doub 13 n y C24 C05 6WQ sing 14 n y C06 C05 6WQ sing 15 n n C06 C07 6WQ sing 16 n n C25 C02 6WQ sing 17 n y C08 C07 6WQ doub 18 n y C08 C09 6WQ sing 19 n y C05 C04 6WQ doub 20 n y C07 C13 6WQ sing 21 n y C09 C10 6WQ doub 22 n y C13 C12 6WQ doub 23 n y C02 O01 6WQ sing 24 n n C02 C03 6WQ doub 25 n y C10 C12 6WQ sing 26 n y C10 O11 6WQ sing 27 n n C04 C03 6WQ sing 28 n y O01 H1 6WQ sing 29 n n C03 H2 6WQ sing 30 n n C04 H3 6WQ sing 31 n n C08 H5 6WQ sing 32 n n C09 H6 6WQ sing 33 n n O11 H7 6WQ sing 34 n n C12 H8 6WQ sing 35 n n C13 H9 6WQ sing 36 n n C15 H11 6WQ sing 37 n n C15 H12 6WQ sing 38 n n C16 H13 6WQ sing 39 n n C16 H14 6WQ sing 40 n n C19 H15 6WQ sing 41 n n C20 H16 6WQ sing 42 n n C23 H17 6WQ sing 43 n n C24 H18 6WQ sing 44 n n C25 H19 6WQ sing 45 n n # _atom_sites.entry_id 5KRK _atom_sites.fract_transf_matrix[1][1] 0.018512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007076 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 6WQ A 1 601 1 6WQ 6WQ . F 3 6WQ B 1 601 1 6WQ 6WQ . G 4 HOH A 1 701 55 HOH HOH . G 4 HOH A 2 702 18 HOH HOH . G 4 HOH A 3 703 70 HOH HOH . G 4 HOH A 4 704 10 HOH HOH . G 4 HOH A 5 705 66 HOH HOH . G 4 HOH A 6 706 62 HOH HOH . G 4 HOH A 7 707 5 HOH HOH . G 4 HOH A 8 708 3 HOH HOH . G 4 HOH A 9 709 87 HOH HOH . G 4 HOH A 10 710 97 HOH HOH . G 4 HOH A 11 711 8 HOH HOH . G 4 HOH A 12 712 44 HOH HOH . G 4 HOH A 13 713 51 HOH HOH . G 4 HOH A 14 714 47 HOH HOH . G 4 HOH A 15 715 60 HOH HOH . G 4 HOH A 16 716 9 HOH HOH . G 4 HOH A 17 717 108 HOH HOH . G 4 HOH A 18 718 40 HOH HOH . G 4 HOH A 19 719 50 HOH HOH . G 4 HOH A 20 720 28 HOH HOH . G 4 HOH A 21 721 7 HOH HOH . G 4 HOH A 22 722 79 HOH HOH . G 4 HOH A 23 723 6 HOH HOH . G 4 HOH A 24 724 52 HOH HOH . G 4 HOH A 25 725 4 HOH HOH . G 4 HOH A 26 726 14 HOH HOH . G 4 HOH A 27 727 43 HOH HOH . G 4 HOH A 28 728 46 HOH HOH . G 4 HOH A 29 729 68 HOH HOH . G 4 HOH A 30 730 36 HOH HOH . G 4 HOH A 31 731 13 HOH HOH . G 4 HOH A 32 732 39 HOH HOH . G 4 HOH A 33 733 20 HOH HOH . G 4 HOH A 34 734 86 HOH HOH . G 4 HOH A 35 735 74 HOH HOH . G 4 HOH A 36 736 16 HOH HOH . G 4 HOH A 37 737 59 HOH HOH . G 4 HOH A 38 738 61 HOH HOH . G 4 HOH A 39 739 106 HOH HOH . G 4 HOH A 40 740 42 HOH HOH . G 4 HOH A 41 741 100 HOH HOH . G 4 HOH A 42 742 73 HOH HOH . G 4 HOH A 43 743 76 HOH HOH . G 4 HOH A 44 744 53 HOH HOH . G 4 HOH A 45 745 71 HOH HOH . G 4 HOH A 46 746 104 HOH HOH . G 4 HOH A 47 747 48 HOH HOH . G 4 HOH A 48 748 69 HOH HOH . G 4 HOH A 49 749 77 HOH HOH . G 4 HOH A 50 750 29 HOH HOH . H 4 HOH B 1 701 84 HOH HOH . H 4 HOH B 2 702 102 HOH HOH . H 4 HOH B 3 703 81 HOH HOH . H 4 HOH B 4 704 75 HOH HOH . H 4 HOH B 5 705 12 HOH HOH . H 4 HOH B 6 706 21 HOH HOH . H 4 HOH B 7 707 72 HOH HOH . H 4 HOH B 8 708 54 HOH HOH . H 4 HOH B 9 709 24 HOH HOH . H 4 HOH B 10 710 88 HOH HOH . H 4 HOH B 11 711 34 HOH HOH . H 4 HOH B 12 712 11 HOH HOH . H 4 HOH B 13 713 25 HOH HOH . H 4 HOH B 14 714 85 HOH HOH . H 4 HOH B 15 715 26 HOH HOH . H 4 HOH B 16 716 17 HOH HOH . H 4 HOH B 17 717 1 HOH HOH . H 4 HOH B 18 718 23 HOH HOH . H 4 HOH B 19 719 32 HOH HOH . H 4 HOH B 20 720 57 HOH HOH . H 4 HOH B 21 721 67 HOH HOH . H 4 HOH B 22 722 15 HOH HOH . H 4 HOH B 23 723 30 HOH HOH . H 4 HOH B 24 724 101 HOH HOH . H 4 HOH B 25 725 80 HOH HOH . H 4 HOH B 26 726 38 HOH HOH . H 4 HOH B 27 727 49 HOH HOH . H 4 HOH B 28 728 45 HOH HOH . H 4 HOH B 29 729 110 HOH HOH . H 4 HOH B 30 730 2 HOH HOH . H 4 HOH B 31 731 63 HOH HOH . H 4 HOH B 32 732 41 HOH HOH . H 4 HOH B 33 733 33 HOH HOH . H 4 HOH B 34 734 65 HOH HOH . H 4 HOH B 35 735 37 HOH HOH . H 4 HOH B 36 736 78 HOH HOH . H 4 HOH B 37 737 90 HOH HOH . H 4 HOH B 38 738 94 HOH HOH . H 4 HOH B 39 739 103 HOH HOH . H 4 HOH B 40 740 58 HOH HOH . H 4 HOH B 41 741 99 HOH HOH . H 4 HOH B 42 742 22 HOH HOH . H 4 HOH B 43 743 91 HOH HOH . H 4 HOH B 44 744 89 HOH HOH . H 4 HOH B 45 745 35 HOH HOH . H 4 HOH B 46 746 105 HOH HOH . H 4 HOH B 47 747 82 HOH HOH . H 4 HOH B 48 748 31 HOH HOH . H 4 HOH B 49 749 92 HOH HOH . H 4 HOH B 50 750 96 HOH HOH . I 4 HOH C 1 701 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 6WQ . . . E 3 16.198 -0.616 0.537 1 24.71 ? O01 6WQ 601 A 1 HETATM 2 C C02 6WQ . . . E 3 16.819 -0.957 1.664 1 26 ? C02 6WQ 601 A 1 HETATM 3 C C03 6WQ . . . E 3 18.169 -1.141 1.678 1 27.64 ? C03 6WQ 601 A 1 HETATM 4 C C04 6WQ . . . E 3 18.795 -1.515 2.822 1 29.37 ? C04 6WQ 601 A 1 HETATM 5 C C05 6WQ . . . E 3 18.067 -1.706 3.972 1 29.9 ? C05 6WQ 601 A 1 HETATM 6 C C06 6WQ . . . E 3 18.752 -2.1 5.233 1 30.07 ? C06 6WQ 601 A 1 HETATM 7 C C07 6WQ . . . E 3 20.163 -1.658 5.342 1 30.1 ? C07 6WQ 601 A 1 HETATM 8 C C08 6WQ . . . E 3 20.44 -0.333 5.438 1 27.65 ? C08 6WQ 601 A 1 HETATM 9 C C09 6WQ . . . E 3 21.734 0.071 5.497 1 27.74 ? C09 6WQ 601 A 1 HETATM 10 C C10 6WQ . . . E 3 22.77 -0.824 5.457 1 28.92 ? C10 6WQ 601 A 1 HETATM 11 O O11 6WQ . . . E 3 24.027 -0.377 5.534 1 27.99 ? O11 6WQ 601 A 1 HETATM 12 C C12 6WQ . . . E 3 22.512 -2.159 5.361 1 29.84 ? C12 6WQ 601 A 1 HETATM 13 C C13 6WQ . . . E 3 21.207 -2.559 5.292 1 31.35 ? C13 6WQ 601 A 1 HETATM 14 C C14 6WQ . . . E 3 18.153 -2.944 6.107 1 29.19 ? C14 6WQ 601 A 1 HETATM 15 C C15 6WQ . . . E 3 17.019 -3.781 5.776 1 29.09 ? C15 6WQ 601 A 1 HETATM 16 C C16 6WQ . . . E 3 17.14 -5.007 6.546 1 28.97 ? C16 6WQ 601 A 1 HETATM 17 C C17 6WQ . . . E 3 18.193 -4.755 7.545 1 29.92 ? C17 6WQ 601 A 1 HETATM 18 C C18 6WQ . . . E 3 18.779 -3.55 7.303 1 29.65 ? C18 6WQ 601 A 1 HETATM 19 C C19 6WQ . . . E 3 19.797 -3.102 8.116 1 30.09 ? C19 6WQ 601 A 1 HETATM 20 C C20 6WQ . . . E 3 20.204 -3.866 9.149 1 32.23 ? C20 6WQ 601 A 1 HETATM 21 C C21 6WQ . . . E 3 19.615 -5.087 9.413 1 33.6 ? C21 6WQ 601 A 1 HETATM 22 BR BR 6WQ . . . E 3 20.245 -6.121 10.881 1 59.9 ? BR 6WQ 601 A 1 HETATM 23 C C23 6WQ . . . E 3 18.603 -5.528 8.606 1 31.98 ? C23 6WQ 601 A 1 HETATM 24 C C24 6WQ . . . E 3 16.719 -1.538 3.942 1 28.56 ? C24 6WQ 601 A 1 HETATM 25 C C25 6WQ . . . E 3 16.095 -1.172 2.787 1 26.92 ? C25 6WQ 601 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #