data_5KRL # _model_server_result.job_id TD4H7o-7vkBpTIr3Vbxs3A _model_server_result.datetime_utc '2024-12-04 21:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5krl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5KRL # _exptl.entry_id 5KRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 264.747 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{S},3~{a}~{R},7~{a}~{S})-5-(2-chloranyl-4-oxidanyl-phenyl)-2,3,3~{a},4,7,7~{a}-hexahydro-1~{H}-inden-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.36 _cell.angle_gamma 90 _cell.entry_id 5KRL _cell.length_a 55.86 _cell.length_b 82.72 _cell.length_c 58.58 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C15 H17 Cl O2' _chem_comp.formula_weight 264.747 _chem_comp.id 6WR _chem_comp.mon_nstd_flag . _chem_comp.name (1~{S},3~{a}~{R},7~{a}~{S})-5-(2-chloranyl-4-oxidanyl-phenyl)-2,3,3~{a},4,7,7~{a}-hexahydro-1~{H}-inden-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C06 6WR doub 1 n y C01 C02 6WR sing 2 n y C06 C05 6WR sing 3 n y O01 C02 6WR sing 4 n n C02 C03 6WR doub 5 n y C05 C07 6WR sing 6 n n C05 C04 6WR doub 7 n y C07 C08 6WR sing 8 n n C07 C12 6WR doub 9 n n C03 C04 6WR sing 10 n y C08 C09 6WR sing 11 n n C04 CL 6WR sing 12 n n C12 C11 6WR sing 13 n n C09 C10 6WR sing 14 n n C09 C13 6WR sing 15 n n C10 C11 6WR sing 16 n n C10 C15 6WR sing 17 n n O02 C15 6WR sing 18 n n C15 C14 6WR sing 19 n n C13 C14 6WR sing 20 n n C01 H1 6WR sing 21 n n C03 H2 6WR sing 22 n n C06 H3 6WR sing 23 n n O01 H4 6WR sing 24 n n C08 H5 6WR sing 25 n n C08 H6 6WR sing 26 n n C09 H7 6WR sing 27 n n C10 H8 6WR sing 28 n n C11 H9 6WR sing 29 n n C11 H10 6WR sing 30 n n C12 H11 6WR sing 31 n n C13 H12 6WR sing 32 n n C13 H13 6WR sing 33 n n C14 H14 6WR sing 34 n n C14 H15 6WR sing 35 n n C15 H16 6WR sing 36 n n O02 H17 6WR sing 37 n n # _atom_sites.entry_id 5KRL _atom_sites.fract_transf_matrix[1][1] 0.017902 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00629 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012089 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 6WR A 1 601 1 6WR 6WR . F 3 6WR B 1 601 1 6WR 6WR . G 4 HOH A 1 701 58 HOH HOH . G 4 HOH A 2 702 13 HOH HOH . G 4 HOH A 3 703 208 HOH HOH . G 4 HOH A 4 704 86 HOH HOH . G 4 HOH A 5 705 141 HOH HOH . G 4 HOH A 6 706 143 HOH HOH . G 4 HOH A 7 707 106 HOH HOH . G 4 HOH A 8 708 7 HOH HOH . G 4 HOH A 9 709 64 HOH HOH . G 4 HOH A 10 710 3 HOH HOH . G 4 HOH A 11 711 44 HOH HOH . G 4 HOH A 12 712 177 HOH HOH . G 4 HOH A 13 713 205 HOH HOH . G 4 HOH A 14 714 182 HOH HOH . G 4 HOH A 15 715 112 HOH HOH . G 4 HOH A 16 716 221 HOH HOH . G 4 HOH A 17 717 210 HOH HOH . G 4 HOH A 18 718 142 HOH HOH . G 4 HOH A 19 719 82 HOH HOH . G 4 HOH A 20 720 32 HOH HOH . G 4 HOH A 21 721 43 HOH HOH . G 4 HOH A 22 722 6 HOH HOH . G 4 HOH A 23 723 15 HOH HOH . G 4 HOH A 24 724 24 HOH HOH . G 4 HOH A 25 725 87 HOH HOH . G 4 HOH A 26 726 120 HOH HOH . G 4 HOH A 27 727 196 HOH HOH . G 4 HOH A 28 728 68 HOH HOH . G 4 HOH A 29 729 88 HOH HOH . G 4 HOH A 30 730 16 HOH HOH . G 4 HOH A 31 731 162 HOH HOH . G 4 HOH A 32 732 33 HOH HOH . G 4 HOH A 33 733 171 HOH HOH . G 4 HOH A 34 734 34 HOH HOH . G 4 HOH A 35 735 79 HOH HOH . G 4 HOH A 36 736 52 HOH HOH . G 4 HOH A 37 737 127 HOH HOH . G 4 HOH A 38 738 19 HOH HOH . G 4 HOH A 39 739 48 HOH HOH . G 4 HOH A 40 740 202 HOH HOH . G 4 HOH A 41 741 109 HOH HOH . G 4 HOH A 42 742 73 HOH HOH . G 4 HOH A 43 743 207 HOH HOH . G 4 HOH A 44 744 185 HOH HOH . G 4 HOH A 45 745 107 HOH HOH . G 4 HOH A 46 746 147 HOH HOH . G 4 HOH A 47 747 155 HOH HOH . G 4 HOH A 48 748 130 HOH HOH . G 4 HOH A 49 749 180 HOH HOH . G 4 HOH A 50 750 138 HOH HOH . G 4 HOH A 51 751 121 HOH HOH . G 4 HOH A 52 752 75 HOH HOH . G 4 HOH A 53 753 170 HOH HOH . G 4 HOH A 54 754 51 HOH HOH . G 4 HOH A 55 755 9 HOH HOH . G 4 HOH A 56 756 212 HOH HOH . G 4 HOH A 57 757 146 HOH HOH . G 4 HOH A 58 758 66 HOH HOH . G 4 HOH A 59 759 118 HOH HOH . G 4 HOH A 60 760 11 HOH HOH . G 4 HOH A 61 761 56 HOH HOH . G 4 HOH A 62 762 183 HOH HOH . G 4 HOH A 63 763 22 HOH HOH . G 4 HOH A 64 764 209 HOH HOH . G 4 HOH A 65 765 62 HOH HOH . G 4 HOH A 66 766 133 HOH HOH . G 4 HOH A 67 767 108 HOH HOH . G 4 HOH A 68 768 10 HOH HOH . G 4 HOH A 69 769 149 HOH HOH . G 4 HOH A 70 770 154 HOH HOH . G 4 HOH A 71 771 65 HOH HOH . G 4 HOH A 72 772 111 HOH HOH . G 4 HOH A 73 773 8 HOH HOH . G 4 HOH A 74 774 41 HOH HOH . G 4 HOH A 75 775 29 HOH HOH . G 4 HOH A 76 776 35 HOH HOH . G 4 HOH A 77 777 1 HOH HOH . G 4 HOH A 78 778 71 HOH HOH . G 4 HOH A 79 779 42 HOH HOH . G 4 HOH A 80 780 63 HOH HOH . G 4 HOH A 81 781 123 HOH HOH . G 4 HOH A 82 782 67 HOH HOH . G 4 HOH A 83 783 78 HOH HOH . G 4 HOH A 84 784 220 HOH HOH . G 4 HOH A 85 785 95 HOH HOH . G 4 HOH A 86 786 69 HOH HOH . G 4 HOH A 87 787 50 HOH HOH . G 4 HOH A 88 788 37 HOH HOH . G 4 HOH A 89 789 150 HOH HOH . G 4 HOH A 90 790 45 HOH HOH . G 4 HOH A 91 791 119 HOH HOH . G 4 HOH A 92 792 173 HOH HOH . G 4 HOH A 93 793 156 HOH HOH . G 4 HOH A 94 794 97 HOH HOH . G 4 HOH A 95 795 59 HOH HOH . G 4 HOH A 96 796 60 HOH HOH . G 4 HOH A 97 797 122 HOH HOH . G 4 HOH A 98 798 167 HOH HOH . G 4 HOH A 99 799 53 HOH HOH . G 4 HOH A 100 800 188 HOH HOH . G 4 HOH A 101 801 153 HOH HOH . G 4 HOH A 102 802 144 HOH HOH . G 4 HOH A 103 803 116 HOH HOH . G 4 HOH A 104 804 81 HOH HOH . G 4 HOH A 105 805 61 HOH HOH . G 4 HOH A 106 806 216 HOH HOH . G 4 HOH A 107 807 224 HOH HOH . G 4 HOH A 108 808 204 HOH HOH . G 4 HOH A 109 809 195 HOH HOH . G 4 HOH A 110 810 85 HOH HOH . G 4 HOH A 111 811 145 HOH HOH . G 4 HOH A 112 812 135 HOH HOH . G 4 HOH A 113 813 192 HOH HOH . G 4 HOH A 114 814 225 HOH HOH . G 4 HOH A 115 815 214 HOH HOH . G 4 HOH A 116 816 159 HOH HOH . G 4 HOH A 117 817 172 HOH HOH . G 4 HOH A 118 818 23 HOH HOH . G 4 HOH A 119 819 168 HOH HOH . G 4 HOH A 120 820 215 HOH HOH . G 4 HOH A 121 821 186 HOH HOH . G 4 HOH A 122 822 148 HOH HOH . G 4 HOH A 123 823 124 HOH HOH . G 4 HOH A 124 824 179 HOH HOH . G 4 HOH A 125 825 70 HOH HOH . G 4 HOH A 126 826 131 HOH HOH . G 4 HOH A 127 827 223 HOH HOH . G 4 HOH A 128 828 184 HOH HOH . G 4 HOH A 129 829 206 HOH HOH . G 4 HOH A 130 830 218 HOH HOH . G 4 HOH A 131 831 27 HOH HOH . G 4 HOH A 132 832 165 HOH HOH . G 4 HOH A 133 833 193 HOH HOH . H 4 HOH B 1 701 113 HOH HOH . H 4 HOH B 2 702 105 HOH HOH . H 4 HOH B 3 703 18 HOH HOH . H 4 HOH B 4 704 114 HOH HOH . H 4 HOH B 5 705 152 HOH HOH . H 4 HOH B 6 706 187 HOH HOH . H 4 HOH B 7 707 4 HOH HOH . H 4 HOH B 8 708 92 HOH HOH . H 4 HOH B 9 709 28 HOH HOH . H 4 HOH B 10 710 103 HOH HOH . H 4 HOH B 11 711 174 HOH HOH . H 4 HOH B 12 712 55 HOH HOH . H 4 HOH B 13 713 12 HOH HOH . H 4 HOH B 14 714 30 HOH HOH . H 4 HOH B 15 715 5 HOH HOH . H 4 HOH B 16 716 77 HOH HOH . H 4 HOH B 17 717 54 HOH HOH . H 4 HOH B 18 718 89 HOH HOH . H 4 HOH B 19 719 21 HOH HOH . H 4 HOH B 20 720 178 HOH HOH . H 4 HOH B 21 721 128 HOH HOH . H 4 HOH B 22 722 139 HOH HOH . H 4 HOH B 23 723 158 HOH HOH . H 4 HOH B 24 724 26 HOH HOH . H 4 HOH B 25 725 46 HOH HOH . H 4 HOH B 26 726 176 HOH HOH . H 4 HOH B 27 727 126 HOH HOH . H 4 HOH B 28 728 100 HOH HOH . H 4 HOH B 29 729 2 HOH HOH . H 4 HOH B 30 730 25 HOH HOH . H 4 HOH B 31 731 94 HOH HOH . H 4 HOH B 32 732 160 HOH HOH . H 4 HOH B 33 733 14 HOH HOH . H 4 HOH B 34 734 76 HOH HOH . H 4 HOH B 35 735 57 HOH HOH . H 4 HOH B 36 736 201 HOH HOH . H 4 HOH B 37 737 219 HOH HOH . H 4 HOH B 38 738 99 HOH HOH . H 4 HOH B 39 739 72 HOH HOH . H 4 HOH B 40 740 17 HOH HOH . H 4 HOH B 41 741 169 HOH HOH . H 4 HOH B 42 742 90 HOH HOH . H 4 HOH B 43 743 211 HOH HOH . H 4 HOH B 44 744 84 HOH HOH . H 4 HOH B 45 745 80 HOH HOH . H 4 HOH B 46 746 117 HOH HOH . H 4 HOH B 47 747 91 HOH HOH . H 4 HOH B 48 748 93 HOH HOH . H 4 HOH B 49 749 31 HOH HOH . H 4 HOH B 50 750 129 HOH HOH . H 4 HOH B 51 751 115 HOH HOH . H 4 HOH B 52 752 137 HOH HOH . H 4 HOH B 53 753 134 HOH HOH . H 4 HOH B 54 754 40 HOH HOH . H 4 HOH B 55 755 47 HOH HOH . H 4 HOH B 56 756 191 HOH HOH . H 4 HOH B 57 757 96 HOH HOH . H 4 HOH B 58 758 181 HOH HOH . H 4 HOH B 59 759 227 HOH HOH . H 4 HOH B 60 760 49 HOH HOH . H 4 HOH B 61 761 104 HOH HOH . H 4 HOH B 62 762 38 HOH HOH . H 4 HOH B 63 763 132 HOH HOH . H 4 HOH B 64 764 175 HOH HOH . H 4 HOH B 65 765 101 HOH HOH . H 4 HOH B 66 766 197 HOH HOH . H 4 HOH B 67 767 194 HOH HOH . H 4 HOH B 68 768 198 HOH HOH . H 4 HOH B 69 769 199 HOH HOH . H 4 HOH B 70 770 161 HOH HOH . H 4 HOH B 71 771 222 HOH HOH . H 4 HOH B 72 772 151 HOH HOH . H 4 HOH B 73 773 39 HOH HOH . H 4 HOH B 74 774 125 HOH HOH . H 4 HOH B 75 775 74 HOH HOH . H 4 HOH B 76 776 20 HOH HOH . H 4 HOH B 77 777 200 HOH HOH . H 4 HOH B 78 778 226 HOH HOH . H 4 HOH B 79 779 166 HOH HOH . H 4 HOH B 80 780 164 HOH HOH . H 4 HOH B 81 781 98 HOH HOH . H 4 HOH B 82 782 189 HOH HOH . H 4 HOH B 83 783 163 HOH HOH . H 4 HOH B 84 784 36 HOH HOH . H 4 HOH B 85 785 203 HOH HOH . I 4 HOH C 1 701 217 HOH HOH . I 4 HOH C 2 702 136 HOH HOH . I 4 HOH C 3 703 213 HOH HOH . I 4 HOH C 4 704 102 HOH HOH . I 4 HOH C 5 705 190 HOH HOH . J 4 HOH D 1 701 83 HOH HOH . J 4 HOH D 2 702 110 HOH HOH . J 4 HOH D 3 703 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 6WR . . . E 3 -4.294 -3.732 24.468 0.73 15.64 ? C01 6WR 601 A 1 HETATM 2 C C02 6WR . . . E 3 -2.962 -3.873 24.437 0.73 17.07 ? C02 6WR 601 A 1 HETATM 3 C C03 6WR . . . E 3 -2.439 -4.297 23.278 0.73 15.79 ? C03 6WR 601 A 1 HETATM 4 C C04 6WR . . . E 3 -3.199 -4.572 22.199 0.73 15.12 ? C04 6WR 601 A 1 HETATM 5 C C05 6WR . . . E 3 -4.549 -4.433 22.206 0.73 16.43 ? C05 6WR 601 A 1 HETATM 6 C C06 6WR . . . E 3 -5.048 -4.007 23.392 0.73 14.98 ? C06 6WR 601 A 1 HETATM 7 O O01 6WR . . . E 3 -2.179 -3.599 25.516 0.73 16.59 ? O01 6WR 601 A 1 HETATM 8 CL CL 6WR . . . E 3 -2.248 -5.101 20.85 0.73 28.81 ? CL 6WR 601 A 1 HETATM 9 C C07 6WR . . . E 3 -5.418 -4.688 21.184 0.73 19.19 ? C07 6WR 601 A 1 HETATM 10 C C08 6WR . . . E 3 -6.04 -3.527 20.409 0.73 20.65 ? C08 6WR 601 A 1 HETATM 11 C C09 6WR . . . E 3 -6.635 -3.796 19.018 0.73 22.4 ? C09 6WR 601 A 1 HETATM 12 C C10 6WR . . . E 3 -7.251 -5.192 18.851 0.73 22.78 ? C10 6WR 601 A 1 HETATM 13 C C11 6WR . . . E 3 -6.233 -6.243 19.319 0.73 21.04 ? C11 6WR 601 A 1 HETATM 14 C C12 6WR . . . E 3 -5.499 -5.893 20.585 0.73 18.1 ? C12 6WR 601 A 1 HETATM 15 C C13 6WR . . . E 3 -5.654 -3.664 17.84 0.73 22.11 ? C13 6WR 601 A 1 HETATM 16 C C14 6WR . . . E 3 -6.255 -4.529 16.715 0.73 21.87 ? C14 6WR 601 A 1 HETATM 17 C C15 6WR . . . E 3 -7.432 -5.296 17.328 0.73 22.39 ? C15 6WR 601 A 1 HETATM 18 O O02 6WR . . . E 3 -8.637 -4.689 16.924 0.73 21.86 ? O02 6WR 601 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #