data_5KRO
#
_model_server_result.job_id            lRwhBNByzJbkEzPhmgpVUA 
_model_server_result.datetime_utc      '2024-10-12 11:17:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kro 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    5KRO 
#
_exptl.entry_id    5KRO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              361.52 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-17-[methyl(phenyl)amino]-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.81 
_cell.angle_gamma         90 
_cell.entry_id            5KRO 
_cell.length_a            54.37 
_cell.length_b            81.58 
_cell.length_c            58.37 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KRO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C25 H31 N O' 
_chem_comp.formula_weight    361.52 
_chem_comp.id                6WW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-17-[methyl(phenyl)amino]-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 C16 6WW sing 1 n n 
C15 C11 6WW sing 2 n n 
C16 C17 6WW sing 3 n n 
C08 C07 6WW sing 4 n n 
C08 C09 6WW sing 5 n n 
C07 C04 6WW sing 6 n n 
C11 C09 6WW sing 7 n n 
C11 C12 6WW sing 8 n n 
C17 C12 6WW sing 9 n n 
C17 N01 6WW sing 10 n n 
C18 C12 6WW sing 11 n n 
C09 C10 6WW sing 12 n n 
C19 N01 6WW sing 13 n n 
C12 C13 6WW sing 14 n n 
C04 C03 6WW doub 15 n y 
C04 C05 6WW sing 16 n y 
C03 C02 6WW sing 17 n y 
C10 C05 6WW sing 18 n n 
C10 C14 6WW sing 19 n n 
C13 C14 6WW sing 20 n n 
C05 C06 6WW doub 21 n y 
C02 O01 6WW sing 22 n n 
C02 C01 6WW doub 23 n y 
C06 C01 6WW sing 24 n y 
C01 H1 6WW sing 25 n n 
C03 H2 6WW sing 26 n n 
C06 H3 6WW sing 27 n n 
C07 H4 6WW sing 28 n n 
C07 H5 6WW sing 29 n n 
C08 H6 6WW sing 30 n n 
C08 H7 6WW sing 31 n n 
C09 H8 6WW sing 32 n n 
C10 H9 6WW sing 33 n n 
C11 H10 6WW sing 34 n n 
C13 H11 6WW sing 35 n n 
C13 H12 6WW sing 36 n n 
C14 H13 6WW sing 37 n n 
C14 H14 6WW sing 38 n n 
C15 H15 6WW sing 39 n n 
C15 H16 6WW sing 40 n n 
C16 H17 6WW sing 41 n n 
C16 H18 6WW sing 42 n n 
C17 H19 6WW sing 43 n n 
C18 H21 6WW sing 44 n n 
C18 H22 6WW sing 45 n n 
C18 H23 6WW sing 46 n n 
C19 H24 6WW sing 47 n n 
C19 H26 6WW sing 48 n n 
O01 H30 6WW sing 49 n n 
C20 C1 6WW sing 50 n y 
C1 C2 6WW doub 51 n y 
C2 C3 6WW sing 52 n y 
C3 C4 6WW doub 53 n y 
C4 C5 6WW sing 54 n y 
C5 C20 6WW doub 55 n y 
N01 C20 6WW sing 56 n n 
C1 H20 6WW sing 57 n n 
C2 H25 6WW sing 58 n n 
C3 H27 6WW sing 59 n n 
C5 H28 6WW sing 60 n n 
C19 H29 6WW sing 61 n n 
C4 H31 6WW sing 62 n n 
#
_atom_sites.entry_id                     5KRO 
_atom_sites.fract_transf_matrix[1][1]    0.018392 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00699 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 6WW A 1 601 1 6WW 6WW . 
F 3 6WW B 1 601 1 6WW 6WW . 
G 4 HOH A 1 701 126 HOH HOH . 
G 4 HOH A 2 702 86 HOH HOH . 
G 4 HOH A 3 703 102 HOH HOH . 
G 4 HOH A 4 704 39 HOH HOH . 
G 4 HOH A 5 705 54 HOH HOH . 
G 4 HOH A 6 706 158 HOH HOH . 
G 4 HOH A 7 707 53 HOH HOH . 
G 4 HOH A 8 708 64 HOH HOH . 
G 4 HOH A 9 709 187 HOH HOH . 
G 4 HOH A 10 710 69 HOH HOH . 
G 4 HOH A 11 711 49 HOH HOH . 
G 4 HOH A 12 712 52 HOH HOH . 
G 4 HOH A 13 713 28 HOH HOH . 
G 4 HOH A 14 714 74 HOH HOH . 
G 4 HOH A 15 715 43 HOH HOH . 
G 4 HOH A 16 716 2 HOH HOH . 
G 4 HOH A 17 717 27 HOH HOH . 
G 4 HOH A 18 718 168 HOH HOH . 
G 4 HOH A 19 719 16 HOH HOH . 
G 4 HOH A 20 720 61 HOH HOH . 
G 4 HOH A 21 721 56 HOH HOH . 
G 4 HOH A 22 722 34 HOH HOH . 
G 4 HOH A 23 723 40 HOH HOH . 
G 4 HOH A 24 724 144 HOH HOH . 
G 4 HOH A 25 725 10 HOH HOH . 
G 4 HOH A 26 726 83 HOH HOH . 
G 4 HOH A 27 727 3 HOH HOH . 
G 4 HOH A 28 728 183 HOH HOH . 
G 4 HOH A 29 729 17 HOH HOH . 
G 4 HOH A 30 730 71 HOH HOH . 
G 4 HOH A 31 731 121 HOH HOH . 
G 4 HOH A 32 732 99 HOH HOH . 
G 4 HOH A 33 733 100 HOH HOH . 
G 4 HOH A 34 734 13 HOH HOH . 
G 4 HOH A 35 735 186 HOH HOH . 
G 4 HOH A 36 736 46 HOH HOH . 
G 4 HOH A 37 737 73 HOH HOH . 
G 4 HOH A 38 738 22 HOH HOH . 
G 4 HOH A 39 739 82 HOH HOH . 
G 4 HOH A 40 740 84 HOH HOH . 
G 4 HOH A 41 741 41 HOH HOH . 
G 4 HOH A 42 742 4 HOH HOH . 
G 4 HOH A 43 743 26 HOH HOH . 
G 4 HOH A 44 744 31 HOH HOH . 
G 4 HOH A 45 745 93 HOH HOH . 
G 4 HOH A 46 746 135 HOH HOH . 
G 4 HOH A 47 747 113 HOH HOH . 
G 4 HOH A 48 748 23 HOH HOH . 
G 4 HOH A 49 749 14 HOH HOH . 
G 4 HOH A 50 750 116 HOH HOH . 
G 4 HOH A 51 751 1 HOH HOH . 
G 4 HOH A 52 752 20 HOH HOH . 
G 4 HOH A 53 753 194 HOH HOH . 
G 4 HOH A 54 754 120 HOH HOH . 
G 4 HOH A 55 755 42 HOH HOH . 
G 4 HOH A 56 756 155 HOH HOH . 
G 4 HOH A 57 757 195 HOH HOH . 
G 4 HOH A 58 758 119 HOH HOH . 
G 4 HOH A 59 759 45 HOH HOH . 
G 4 HOH A 60 760 146 HOH HOH . 
G 4 HOH A 61 761 161 HOH HOH . 
G 4 HOH A 62 762 139 HOH HOH . 
G 4 HOH A 63 763 65 HOH HOH . 
G 4 HOH A 64 764 112 HOH HOH . 
G 4 HOH A 65 765 79 HOH HOH . 
G 4 HOH A 66 766 159 HOH HOH . 
G 4 HOH A 67 767 104 HOH HOH . 
G 4 HOH A 68 768 142 HOH HOH . 
G 4 HOH A 69 769 127 HOH HOH . 
G 4 HOH A 70 770 165 HOH HOH . 
G 4 HOH A 71 771 148 HOH HOH . 
G 4 HOH A 72 772 184 HOH HOH . 
G 4 HOH A 73 773 98 HOH HOH . 
G 4 HOH A 74 774 25 HOH HOH . 
G 4 HOH A 75 775 129 HOH HOH . 
G 4 HOH A 76 776 188 HOH HOH . 
G 4 HOH A 77 777 89 HOH HOH . 
G 4 HOH A 78 778 114 HOH HOH . 
G 4 HOH A 79 779 147 HOH HOH . 
G 4 HOH A 80 780 149 HOH HOH . 
G 4 HOH A 81 781 103 HOH HOH . 
G 4 HOH A 82 782 72 HOH HOH . 
G 4 HOH A 83 783 174 HOH HOH . 
G 4 HOH A 84 784 181 HOH HOH . 
G 4 HOH A 85 785 192 HOH HOH . 
G 4 HOH A 86 786 141 HOH HOH . 
G 4 HOH A 87 787 118 HOH HOH . 
G 4 HOH A 88 788 169 HOH HOH . 
G 4 HOH A 89 789 150 HOH HOH . 
G 4 HOH A 90 790 95 HOH HOH . 
G 4 HOH A 91 791 173 HOH HOH . 
G 4 HOH A 92 792 7 HOH HOH . 
G 4 HOH A 93 793 199 HOH HOH . 
H 4 HOH B 1 701 134 HOH HOH . 
H 4 HOH B 2 702 78 HOH HOH . 
H 4 HOH B 3 703 75 HOH HOH . 
H 4 HOH B 4 704 166 HOH HOH . 
H 4 HOH B 5 705 11 HOH HOH . 
H 4 HOH B 6 706 105 HOH HOH . 
H 4 HOH B 7 707 35 HOH HOH . 
H 4 HOH B 8 708 132 HOH HOH . 
H 4 HOH B 9 709 115 HOH HOH . 
H 4 HOH B 10 710 196 HOH HOH . 
H 4 HOH B 11 711 37 HOH HOH . 
H 4 HOH B 12 712 9 HOH HOH . 
H 4 HOH B 13 713 48 HOH HOH . 
H 4 HOH B 14 714 18 HOH HOH . 
H 4 HOH B 15 715 122 HOH HOH . 
H 4 HOH B 16 716 47 HOH HOH . 
H 4 HOH B 17 717 12 HOH HOH . 
H 4 HOH B 18 718 96 HOH HOH . 
H 4 HOH B 19 719 90 HOH HOH . 
H 4 HOH B 20 720 38 HOH HOH . 
H 4 HOH B 21 721 29 HOH HOH . 
H 4 HOH B 22 722 60 HOH HOH . 
H 4 HOH B 23 723 109 HOH HOH . 
H 4 HOH B 24 724 58 HOH HOH . 
H 4 HOH B 25 725 70 HOH HOH . 
H 4 HOH B 26 726 179 HOH HOH . 
H 4 HOH B 27 727 59 HOH HOH . 
H 4 HOH B 28 728 66 HOH HOH . 
H 4 HOH B 29 729 50 HOH HOH . 
H 4 HOH B 30 730 111 HOH HOH . 
H 4 HOH B 31 731 94 HOH HOH . 
H 4 HOH B 32 732 76 HOH HOH . 
H 4 HOH B 33 733 97 HOH HOH . 
H 4 HOH B 34 734 156 HOH HOH . 
H 4 HOH B 35 735 44 HOH HOH . 
H 4 HOH B 36 736 55 HOH HOH . 
H 4 HOH B 37 737 8 HOH HOH . 
H 4 HOH B 38 738 180 HOH HOH . 
H 4 HOH B 39 739 68 HOH HOH . 
H 4 HOH B 40 740 63 HOH HOH . 
H 4 HOH B 41 741 170 HOH HOH . 
H 4 HOH B 42 742 67 HOH HOH . 
H 4 HOH B 43 743 19 HOH HOH . 
H 4 HOH B 44 744 57 HOH HOH . 
H 4 HOH B 45 745 197 HOH HOH . 
H 4 HOH B 46 746 124 HOH HOH . 
H 4 HOH B 47 747 24 HOH HOH . 
H 4 HOH B 48 748 130 HOH HOH . 
H 4 HOH B 49 749 125 HOH HOH . 
H 4 HOH B 50 750 6 HOH HOH . 
H 4 HOH B 51 751 140 HOH HOH . 
H 4 HOH B 52 752 30 HOH HOH . 
H 4 HOH B 53 753 77 HOH HOH . 
H 4 HOH B 54 754 5 HOH HOH . 
H 4 HOH B 55 755 107 HOH HOH . 
H 4 HOH B 56 756 62 HOH HOH . 
H 4 HOH B 57 757 136 HOH HOH . 
H 4 HOH B 58 758 51 HOH HOH . 
H 4 HOH B 59 759 21 HOH HOH . 
H 4 HOH B 60 760 157 HOH HOH . 
H 4 HOH B 61 761 128 HOH HOH . 
H 4 HOH B 62 762 88 HOH HOH . 
H 4 HOH B 63 763 152 HOH HOH . 
H 4 HOH B 64 764 32 HOH HOH . 
H 4 HOH B 65 765 164 HOH HOH . 
H 4 HOH B 66 766 110 HOH HOH . 
H 4 HOH B 67 767 177 HOH HOH . 
H 4 HOH B 68 768 137 HOH HOH . 
H 4 HOH B 69 769 33 HOH HOH . 
H 4 HOH B 70 770 200 HOH HOH . 
H 4 HOH B 71 771 145 HOH HOH . 
H 4 HOH B 72 772 178 HOH HOH . 
H 4 HOH B 73 773 131 HOH HOH . 
H 4 HOH B 74 774 91 HOH HOH . 
H 4 HOH B 75 775 198 HOH HOH . 
H 4 HOH B 76 776 106 HOH HOH . 
H 4 HOH B 77 777 193 HOH HOH . 
H 4 HOH B 78 778 171 HOH HOH . 
H 4 HOH B 79 779 81 HOH HOH . 
H 4 HOH B 80 780 85 HOH HOH . 
H 4 HOH B 81 781 182 HOH HOH . 
H 4 HOH B 82 782 176 HOH HOH . 
H 4 HOH B 83 783 138 HOH HOH . 
H 4 HOH B 84 784 190 HOH HOH . 
H 4 HOH B 85 785 117 HOH HOH . 
H 4 HOH B 86 786 87 HOH HOH . 
H 4 HOH B 87 787 160 HOH HOH . 
H 4 HOH B 88 788 163 HOH HOH . 
H 4 HOH B 89 789 154 HOH HOH . 
H 4 HOH B 90 790 92 HOH HOH . 
H 4 HOH B 91 791 15 HOH HOH . 
H 4 HOH B 92 792 167 HOH HOH . 
I 4 HOH C 1 701 151 HOH HOH . 
I 4 HOH C 2 702 133 HOH HOH . 
I 4 HOH C 3 703 108 HOH HOH . 
I 4 HOH C 4 704 185 HOH HOH . 
J 4 HOH D 1 701 101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 6WW . . . F 3 7.433 6.309 35.094 1 23.95 ? C01 6WW 601 B 1 
HETATM 2 C C02 6WW . . . F 3 6.553 6.733 34.237 1 21.68 ? C02 6WW 601 B 1 
HETATM 3 C C03 6WW . . . F 3 6.95 7.017 33.023 1 22.05 ? C03 6WW 601 B 1 
HETATM 4 C C04 6WW . . . F 3 8.2 6.926 32.649 1 25.27 ? C04 6WW 601 B 1 
HETATM 5 C C05 6WW . . . F 3 9.104 6.516 33.528 1 28.25 ? C05 6WW 601 B 1 
HETATM 6 C C06 6WW . . . F 3 8.685 6.209 34.741 1 26.24 ? C06 6WW 601 B 1 
HETATM 7 C C07 6WW . . . F 3 8.559 7.303 31.244 1 28.72 ? C07 6WW 601 B 1 
HETATM 8 C C08 6WW . . . F 3 10.029 7.543 30.987 1 32.04 ? C08 6WW 601 B 1 
HETATM 9 C C09 6WW . . . F 3 10.839 6.463 31.668 1 35.34 ? C09 6WW 601 B 1 
HETATM 10 C C10 6WW . . . F 3 10.562 6.4 33.175 1 32.81 ? C10 6WW 601 B 1 
HETATM 11 C C11 6WW . . . F 3 12.318 6.555 31.464 1 43.74 ? C11 6WW 601 B 1 
HETATM 12 C C12 6WW . . . F 3 13.016 5.295 31.976 1 43.95 ? C12 6WW 601 B 1 
HETATM 13 C C13 6WW . . . F 3 12.832 5.317 33.496 1 38.25 ? C13 6WW 601 B 1 
HETATM 14 C C14 6WW . . . F 3 11.37 5.323 33.897 1 33.18 ? C14 6WW 601 B 1 
HETATM 15 C C15 6WW . . . F 3 12.87 6.813 30.08 1 49.76 ? C15 6WW 601 B 1 
HETATM 16 C C16 6WW . . . F 3 14.26 6.156 30.099 1 52.37 ? C16 6WW 601 B 1 
HETATM 17 C C17 6WW . . . F 3 14.426 5.605 31.505 1 52.76 ? C17 6WW 601 B 1 
HETATM 18 N N01 6WW . . . F 3 15.592 4.82 31.993 1 57.72 ? N01 6WW 601 B 1 
HETATM 19 C C18 6WW . . . F 3 12.527 3.941 31.459 1 42.07 ? C18 6WW 601 B 1 
HETATM 20 C C19 6WW . . . F 3 15.516 3.343 32.044 1 57.74 ? C19 6WW 601 B 1 
HETATM 21 C C20 6WW . . . F 3 16.664 5.356 32.393 1 60.9 ? C20 6WW 601 B 1 
HETATM 22 O O01 6WW . . . F 3 5.297 6.821 34.551 1 31.12 ? O01 6WW 601 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           22 
#