data_5KSQ # _model_server_result.job_id cS1FT1S51wyJ8oYYqQg3Rg _model_server_result.datetime_utc '2024-10-14 18:33:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ksq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":604}' # _entry.id 5KSQ # _exptl.entry_id 5KSQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.46 _cell.angle_gamma 90 _cell.entry_id 5KSQ _cell.length_a 91.984 _cell.length_b 85.16 _cell.length_c 76.603 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KSQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 9 A ASP 9 1_555 C MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 A OD1 ASN 92 A ASN 92 1_555 C MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc3 C MN MN . A MN 501 1_555 E O2 PO4 . A PO4 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc4 C MN MN . A MN 501 1_555 J O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc5 B OD1 ASP 9 B ASP 9 1_555 G MN MN . B MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc6 B OD1 ASN 92 B ASN 92 1_555 G MN MN . B MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc7 G MN MN . B MN 602 1_555 I O3 PO4 . B PO4 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5KSQ _atom_sites.fract_transf_matrix[1][1] 0.010871 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000848 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011743 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 501 501 MN MN . D 3 IOD A 1 502 602 IOD IOD . E 4 PO4 A 1 503 701 PO4 PO4 . F 3 IOD B 1 601 601 IOD IOD . G 2 MN B 1 602 501 MN MN . H 3 IOD B 1 603 602 IOD IOD . I 4 PO4 B 1 604 701 PO4 PO4 . J 5 HOH A 1 601 10 HOH HOH . J 5 HOH A 2 602 124 HOH HOH . J 5 HOH A 3 603 26 HOH HOH . J 5 HOH A 4 604 128 HOH HOH . J 5 HOH A 5 605 76 HOH HOH . J 5 HOH A 6 606 138 HOH HOH . J 5 HOH A 7 607 56 HOH HOH . J 5 HOH A 8 608 89 HOH HOH . J 5 HOH A 9 609 21 HOH HOH . J 5 HOH A 10 610 109 HOH HOH . J 5 HOH A 11 611 14 HOH HOH . J 5 HOH A 12 612 31 HOH HOH . J 5 HOH A 13 613 79 HOH HOH . J 5 HOH A 14 614 146 HOH HOH . J 5 HOH A 15 615 71 HOH HOH . J 5 HOH A 16 616 2 HOH HOH . J 5 HOH A 17 617 112 HOH HOH . J 5 HOH A 18 618 122 HOH HOH . J 5 HOH A 19 619 18 HOH HOH . J 5 HOH A 20 620 87 HOH HOH . J 5 HOH A 21 621 132 HOH HOH . J 5 HOH A 22 622 40 HOH HOH . J 5 HOH A 23 623 27 HOH HOH . J 5 HOH A 24 624 63 HOH HOH . J 5 HOH A 25 625 115 HOH HOH . J 5 HOH A 26 626 105 HOH HOH . J 5 HOH A 27 627 1 HOH HOH . J 5 HOH A 28 628 67 HOH HOH . J 5 HOH A 29 629 35 HOH HOH . J 5 HOH A 30 630 123 HOH HOH . J 5 HOH A 31 631 72 HOH HOH . J 5 HOH A 32 632 119 HOH HOH . J 5 HOH A 33 633 148 HOH HOH . J 5 HOH A 34 634 70 HOH HOH . J 5 HOH A 35 635 52 HOH HOH . J 5 HOH A 36 636 39 HOH HOH . J 5 HOH A 37 637 33 HOH HOH . J 5 HOH A 38 638 12 HOH HOH . J 5 HOH A 39 639 82 HOH HOH . J 5 HOH A 40 640 120 HOH HOH . J 5 HOH A 41 641 150 HOH HOH . J 5 HOH A 42 642 130 HOH HOH . J 5 HOH A 43 643 68 HOH HOH . J 5 HOH A 44 644 22 HOH HOH . J 5 HOH A 45 645 96 HOH HOH . J 5 HOH A 46 646 59 HOH HOH . J 5 HOH A 47 647 84 HOH HOH . J 5 HOH A 48 648 100 HOH HOH . J 5 HOH A 49 649 97 HOH HOH . J 5 HOH A 50 650 143 HOH HOH . J 5 HOH A 51 651 13 HOH HOH . J 5 HOH A 52 652 77 HOH HOH . J 5 HOH A 53 653 19 HOH HOH . J 5 HOH A 54 654 121 HOH HOH . J 5 HOH A 55 655 46 HOH HOH . J 5 HOH A 56 656 45 HOH HOH . J 5 HOH A 57 657 140 HOH HOH . J 5 HOH A 58 658 8 HOH HOH . J 5 HOH A 59 659 103 HOH HOH . J 5 HOH A 60 660 94 HOH HOH . J 5 HOH A 61 661 80 HOH HOH . J 5 HOH A 62 662 4 HOH HOH . J 5 HOH A 63 663 43 HOH HOH . J 5 HOH A 64 664 65 HOH HOH . J 5 HOH A 65 665 38 HOH HOH . J 5 HOH A 66 666 149 HOH HOH . J 5 HOH A 67 667 106 HOH HOH . J 5 HOH A 68 668 136 HOH HOH . J 5 HOH A 69 669 55 HOH HOH . J 5 HOH A 70 670 86 HOH HOH . J 5 HOH A 71 671 101 HOH HOH . J 5 HOH A 72 672 34 HOH HOH . J 5 HOH A 73 673 78 HOH HOH . J 5 HOH A 74 674 44 HOH HOH . J 5 HOH A 75 675 23 HOH HOH . J 5 HOH A 76 676 83 HOH HOH . J 5 HOH A 77 677 60 HOH HOH . J 5 HOH A 78 678 85 HOH HOH . J 5 HOH A 79 679 108 HOH HOH . J 5 HOH A 80 680 88 HOH HOH . K 5 HOH B 1 701 5 HOH HOH . K 5 HOH B 2 702 134 HOH HOH . K 5 HOH B 3 703 114 HOH HOH . K 5 HOH B 4 704 151 HOH HOH . K 5 HOH B 5 705 48 HOH HOH . K 5 HOH B 6 706 145 HOH HOH . K 5 HOH B 7 707 98 HOH HOH . K 5 HOH B 8 708 20 HOH HOH . K 5 HOH B 9 709 53 HOH HOH . K 5 HOH B 10 710 28 HOH HOH . K 5 HOH B 11 711 51 HOH HOH . K 5 HOH B 12 712 16 HOH HOH . K 5 HOH B 13 713 137 HOH HOH . K 5 HOH B 14 714 66 HOH HOH . K 5 HOH B 15 715 24 HOH HOH . K 5 HOH B 16 716 3 HOH HOH . K 5 HOH B 17 717 81 HOH HOH . K 5 HOH B 18 718 64 HOH HOH . K 5 HOH B 19 719 126 HOH HOH . K 5 HOH B 20 720 47 HOH HOH . K 5 HOH B 21 721 30 HOH HOH . K 5 HOH B 22 722 111 HOH HOH . K 5 HOH B 23 723 110 HOH HOH . K 5 HOH B 24 724 9 HOH HOH . K 5 HOH B 25 725 99 HOH HOH . K 5 HOH B 26 726 29 HOH HOH . K 5 HOH B 27 727 32 HOH HOH . K 5 HOH B 28 728 7 HOH HOH . K 5 HOH B 29 729 62 HOH HOH . K 5 HOH B 30 730 25 HOH HOH . K 5 HOH B 31 731 141 HOH HOH . K 5 HOH B 32 732 11 HOH HOH . K 5 HOH B 33 733 107 HOH HOH . K 5 HOH B 34 734 37 HOH HOH . K 5 HOH B 35 735 49 HOH HOH . K 5 HOH B 36 736 139 HOH HOH . K 5 HOH B 37 737 133 HOH HOH . K 5 HOH B 38 738 131 HOH HOH . K 5 HOH B 39 739 61 HOH HOH . K 5 HOH B 40 740 74 HOH HOH . K 5 HOH B 41 741 54 HOH HOH . K 5 HOH B 42 742 116 HOH HOH . K 5 HOH B 43 743 91 HOH HOH . K 5 HOH B 44 744 129 HOH HOH . K 5 HOH B 45 745 104 HOH HOH . K 5 HOH B 46 746 92 HOH HOH . K 5 HOH B 47 747 135 HOH HOH . K 5 HOH B 48 748 50 HOH HOH . K 5 HOH B 49 749 17 HOH HOH . K 5 HOH B 50 750 93 HOH HOH . K 5 HOH B 51 751 75 HOH HOH . K 5 HOH B 52 752 42 HOH HOH . K 5 HOH B 53 753 144 HOH HOH . K 5 HOH B 54 754 73 HOH HOH . K 5 HOH B 55 755 147 HOH HOH . K 5 HOH B 56 756 15 HOH HOH . K 5 HOH B 57 757 95 HOH HOH . K 5 HOH B 58 758 117 HOH HOH . K 5 HOH B 59 759 142 HOH HOH . K 5 HOH B 60 760 69 HOH HOH . K 5 HOH B 61 761 113 HOH HOH . K 5 HOH B 62 762 57 HOH HOH . K 5 HOH B 63 763 90 HOH HOH . K 5 HOH B 64 764 127 HOH HOH . K 5 HOH B 65 765 102 HOH HOH . K 5 HOH B 66 766 125 HOH HOH . K 5 HOH B 67 767 41 HOH HOH . K 5 HOH B 68 768 58 HOH HOH . K 5 HOH B 69 769 36 HOH HOH . K 5 HOH B 70 770 118 HOH HOH . K 5 HOH B 71 771 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 4 51.629 12.279 49.756 1 71.99 ? P PO4 604 B 1 HETATM 2 O O1 PO4 . . . I 4 53.127 12.103 49.685 1 74.73 ? O1 PO4 604 B 1 HETATM 3 O O2 PO4 . . . I 4 51.295 13.751 49.779 1 74.35 ? O2 PO4 604 B 1 HETATM 4 O O3 PO4 . . . I 4 50.99 11.639 48.547 1 71.35 ? O3 PO4 604 B 1 HETATM 5 O O4 PO4 . . . I 4 51.105 11.623 51.012 1 69.52 ? O4 PO4 604 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 500 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #