data_5KTC # _model_server_result.job_id NQFL5AgkiABLw_3cjwuuCw _model_server_result.datetime_utc '2025-08-01 05:57:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ktc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 5KTC # _exptl.entry_id 5KTC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KTC _cell.length_a 76.268 _cell.length_b 76.268 _cell.length_c 73.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PHE 4 A PHE 4 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A OD1 ASN 5 A ASN 5 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc3 A O ASP 72 A ASP 72 1_555 E MG MG . A MG 204 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 E MG MG . A MG 204 1_555 F O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc5 E MG MG . A MG 204 1_555 F O HOH . A HOH 356 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc6 E MG MG . A MG 204 1_555 F O HOH . A HOH 420 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KTC _atom_sites.fract_transf_matrix[1][1] 0.013112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 201 1 EDO EDO . C 3 FUH A 1 202 1 FUH fuh . D 4 COA A 1 203 1 COA COA . E 5 MG A 1 204 1 MG MG . F 6 HOH A 1 301 40 HOH HOH . F 6 HOH A 2 302 48 HOH HOH . F 6 HOH A 3 303 57 HOH HOH . F 6 HOH A 4 304 83 HOH HOH . F 6 HOH A 5 305 190 HOH HOH . F 6 HOH A 6 306 130 HOH HOH . F 6 HOH A 7 307 70 HOH HOH . F 6 HOH A 8 308 73 HOH HOH . F 6 HOH A 9 309 178 HOH HOH . F 6 HOH A 10 310 39 HOH HOH . F 6 HOH A 11 311 189 HOH HOH . F 6 HOH A 12 312 28 HOH HOH . F 6 HOH A 13 313 161 HOH HOH . F 6 HOH A 14 314 47 HOH HOH . F 6 HOH A 15 315 134 HOH HOH . F 6 HOH A 16 316 153 HOH HOH . F 6 HOH A 17 317 146 HOH HOH . F 6 HOH A 18 318 27 HOH HOH . F 6 HOH A 19 319 16 HOH HOH . F 6 HOH A 20 320 85 HOH HOH . F 6 HOH A 21 321 101 HOH HOH . F 6 HOH A 22 322 55 HOH HOH . F 6 HOH A 23 323 2 HOH HOH . F 6 HOH A 24 324 46 HOH HOH . F 6 HOH A 25 325 54 HOH HOH . F 6 HOH A 26 326 51 HOH HOH . F 6 HOH A 27 327 149 HOH HOH . F 6 HOH A 28 328 86 HOH HOH . F 6 HOH A 29 329 22 HOH HOH . F 6 HOH A 30 330 109 HOH HOH . F 6 HOH A 31 331 129 HOH HOH . F 6 HOH A 32 332 184 HOH HOH . F 6 HOH A 33 333 90 HOH HOH . F 6 HOH A 34 334 136 HOH HOH . F 6 HOH A 35 335 43 HOH HOH . F 6 HOH A 36 336 162 HOH HOH . F 6 HOH A 37 337 93 HOH HOH . F 6 HOH A 38 338 15 HOH HOH . F 6 HOH A 39 339 53 HOH HOH . F 6 HOH A 40 340 181 HOH HOH . F 6 HOH A 41 341 137 HOH HOH . F 6 HOH A 42 342 24 HOH HOH . F 6 HOH A 43 343 92 HOH HOH . F 6 HOH A 44 344 36 HOH HOH . F 6 HOH A 45 345 102 HOH HOH . F 6 HOH A 46 346 125 HOH HOH . F 6 HOH A 47 347 14 HOH HOH . F 6 HOH A 48 348 163 HOH HOH . F 6 HOH A 49 349 41 HOH HOH . F 6 HOH A 50 350 20 HOH HOH . F 6 HOH A 51 351 150 HOH HOH . F 6 HOH A 52 352 172 HOH HOH . F 6 HOH A 53 353 42 HOH HOH . F 6 HOH A 54 354 133 HOH HOH . F 6 HOH A 55 355 35 HOH HOH . F 6 HOH A 56 356 87 HOH HOH . F 6 HOH A 57 357 185 HOH HOH . F 6 HOH A 58 358 34 HOH HOH . F 6 HOH A 59 359 63 HOH HOH . F 6 HOH A 60 360 95 HOH HOH . F 6 HOH A 61 361 154 HOH HOH . F 6 HOH A 62 362 145 HOH HOH . F 6 HOH A 63 363 141 HOH HOH . F 6 HOH A 64 364 49 HOH HOH . F 6 HOH A 65 365 18 HOH HOH . F 6 HOH A 66 366 67 HOH HOH . F 6 HOH A 67 367 88 HOH HOH . F 6 HOH A 68 368 33 HOH HOH . F 6 HOH A 69 369 76 HOH HOH . F 6 HOH A 70 370 113 HOH HOH . F 6 HOH A 71 371 50 HOH HOH . F 6 HOH A 72 372 80 HOH HOH . F 6 HOH A 73 373 31 HOH HOH . F 6 HOH A 74 374 74 HOH HOH . F 6 HOH A 75 375 26 HOH HOH . F 6 HOH A 76 376 91 HOH HOH . F 6 HOH A 77 377 3 HOH HOH . F 6 HOH A 78 378 30 HOH HOH . F 6 HOH A 79 379 58 HOH HOH . F 6 HOH A 80 380 131 HOH HOH . F 6 HOH A 81 381 124 HOH HOH . F 6 HOH A 82 382 79 HOH HOH . F 6 HOH A 83 383 78 HOH HOH . F 6 HOH A 84 384 4 HOH HOH . F 6 HOH A 85 385 10 HOH HOH . F 6 HOH A 86 386 174 HOH HOH . F 6 HOH A 87 387 126 HOH HOH . F 6 HOH A 88 388 29 HOH HOH . F 6 HOH A 89 389 119 HOH HOH . F 6 HOH A 90 390 103 HOH HOH . F 6 HOH A 91 391 127 HOH HOH . F 6 HOH A 92 392 169 HOH HOH . F 6 HOH A 93 393 167 HOH HOH . F 6 HOH A 94 394 17 HOH HOH . F 6 HOH A 95 395 56 HOH HOH . F 6 HOH A 96 396 11 HOH HOH . F 6 HOH A 97 397 179 HOH HOH . F 6 HOH A 98 398 71 HOH HOH . F 6 HOH A 99 399 13 HOH HOH . F 6 HOH A 100 400 1 HOH HOH . F 6 HOH A 101 401 65 HOH HOH . F 6 HOH A 102 402 110 HOH HOH . F 6 HOH A 103 403 7 HOH HOH . F 6 HOH A 104 404 84 HOH HOH . F 6 HOH A 105 405 72 HOH HOH . F 6 HOH A 106 406 140 HOH HOH . F 6 HOH A 107 407 69 HOH HOH . F 6 HOH A 108 408 114 HOH HOH . F 6 HOH A 109 409 187 HOH HOH . F 6 HOH A 110 410 180 HOH HOH . F 6 HOH A 111 411 122 HOH HOH . F 6 HOH A 112 412 81 HOH HOH . F 6 HOH A 113 413 38 HOH HOH . F 6 HOH A 114 414 138 HOH HOH . F 6 HOH A 115 415 156 HOH HOH . F 6 HOH A 116 416 75 HOH HOH . F 6 HOH A 117 417 44 HOH HOH . F 6 HOH A 118 418 9 HOH HOH . F 6 HOH A 119 419 12 HOH HOH . F 6 HOH A 120 420 59 HOH HOH . F 6 HOH A 121 421 132 HOH HOH . F 6 HOH A 122 422 164 HOH HOH . F 6 HOH A 123 423 104 HOH HOH . F 6 HOH A 124 424 188 HOH HOH . F 6 HOH A 125 425 182 HOH HOH . F 6 HOH A 126 426 173 HOH HOH . F 6 HOH A 127 427 82 HOH HOH . F 6 HOH A 128 428 148 HOH HOH . F 6 HOH A 129 429 143 HOH HOH . F 6 HOH A 130 430 183 HOH HOH . F 6 HOH A 131 431 107 HOH HOH . F 6 HOH A 132 432 121 HOH HOH . F 6 HOH A 133 433 155 HOH HOH . F 6 HOH A 134 434 96 HOH HOH . F 6 HOH A 135 435 135 HOH HOH . F 6 HOH A 136 436 61 HOH HOH . F 6 HOH A 137 437 120 HOH HOH . F 6 HOH A 138 438 97 HOH HOH . F 6 HOH A 139 439 19 HOH HOH . F 6 HOH A 140 440 147 HOH HOH . F 6 HOH A 141 441 170 HOH HOH . F 6 HOH A 142 442 6 HOH HOH . F 6 HOH A 143 443 144 HOH HOH . F 6 HOH A 144 444 123 HOH HOH . F 6 HOH A 145 445 21 HOH HOH . F 6 HOH A 146 446 160 HOH HOH . F 6 HOH A 147 447 139 HOH HOH . F 6 HOH A 148 448 157 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -24.71 _atom_site.Cartn_y 14.126 _atom_site.Cartn_z -13.111 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #