data_5KTU
#
_model_server_result.job_id            DpV1fgbh9D4IZMgh-uOKNQ 
_model_server_result.datetime_utc      '2024-11-15 00:06:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ktu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1201}' 
#
_entry.id    5KTU 
#
_exptl.entry_id    5KTU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5KTU 
_cell.length_a            125.22 
_cell.length_b            125.22 
_cell.length_c            39.789 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5KTU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 120 n n 
S C1 DMS sing 121 n n 
S C2 DMS sing 122 n n 
C1 H11 DMS sing 123 n n 
C1 H12 DMS sing 124 n n 
C1 H13 DMS sing 125 n n 
C2 H21 DMS sing 126 n n 
C2 H22 DMS sing 127 n n 
C2 H23 DMS sing 128 n n 
#
_atom_sites.entry_id                     5KTU 
_atom_sites.fract_transf_matrix[1][1]    0.007986 
_atom_sites.fract_transf_matrix[1][2]    0.004611 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009221 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025133 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 6XB A 1 1201 1 6XB DRG . 
D 3 DMS B 1 1201 1 DMS DMS . 
E 4 HOH A 1 1301 190 HOH HOH . 
E 4 HOH A 2 1302 167 HOH HOH . 
E 4 HOH A 3 1303 72 HOH HOH . 
E 4 HOH A 4 1304 107 HOH HOH . 
E 4 HOH A 5 1305 84 HOH HOH . 
E 4 HOH A 6 1306 186 HOH HOH . 
E 4 HOH A 7 1307 23 HOH HOH . 
E 4 HOH A 8 1308 25 HOH HOH . 
E 4 HOH A 9 1309 108 HOH HOH . 
E 4 HOH A 10 1310 106 HOH HOH . 
E 4 HOH A 11 1311 98 HOH HOH . 
E 4 HOH A 12 1312 105 HOH HOH . 
E 4 HOH A 13 1313 75 HOH HOH . 
E 4 HOH A 14 1314 128 HOH HOH . 
E 4 HOH A 15 1315 103 HOH HOH . 
E 4 HOH A 16 1316 97 HOH HOH . 
E 4 HOH A 17 1317 210 HOH HOH . 
E 4 HOH A 18 1318 177 HOH HOH . 
E 4 HOH A 19 1319 30 HOH HOH . 
E 4 HOH A 20 1320 71 HOH HOH . 
E 4 HOH A 21 1321 36 HOH HOH . 
E 4 HOH A 22 1322 112 HOH HOH . 
E 4 HOH A 23 1323 17 HOH HOH . 
E 4 HOH A 24 1324 129 HOH HOH . 
E 4 HOH A 25 1325 89 HOH HOH . 
E 4 HOH A 26 1326 74 HOH HOH . 
E 4 HOH A 27 1327 57 HOH HOH . 
E 4 HOH A 28 1328 66 HOH HOH . 
E 4 HOH A 29 1329 168 HOH HOH . 
E 4 HOH A 30 1330 56 HOH HOH . 
E 4 HOH A 31 1331 86 HOH HOH . 
E 4 HOH A 32 1332 124 HOH HOH . 
E 4 HOH A 33 1333 139 HOH HOH . 
E 4 HOH A 34 1334 111 HOH HOH . 
E 4 HOH A 35 1335 104 HOH HOH . 
E 4 HOH A 36 1336 67 HOH HOH . 
E 4 HOH A 37 1337 64 HOH HOH . 
E 4 HOH A 38 1338 101 HOH HOH . 
E 4 HOH A 39 1339 27 HOH HOH . 
E 4 HOH A 40 1340 52 HOH HOH . 
E 4 HOH A 41 1341 93 HOH HOH . 
E 4 HOH A 42 1342 120 HOH HOH . 
E 4 HOH A 43 1343 96 HOH HOH . 
E 4 HOH A 44 1344 175 HOH HOH . 
E 4 HOH A 45 1345 33 HOH HOH . 
E 4 HOH A 46 1346 63 HOH HOH . 
E 4 HOH A 47 1347 207 HOH HOH . 
E 4 HOH A 48 1348 169 HOH HOH . 
E 4 HOH A 49 1349 119 HOH HOH . 
E 4 HOH A 50 1350 176 HOH HOH . 
E 4 HOH A 51 1351 14 HOH HOH . 
E 4 HOH A 52 1352 70 HOH HOH . 
E 4 HOH A 53 1353 125 HOH HOH . 
E 4 HOH A 54 1354 55 HOH HOH . 
E 4 HOH A 55 1355 58 HOH HOH . 
E 4 HOH A 56 1356 102 HOH HOH . 
E 4 HOH A 57 1357 123 HOH HOH . 
E 4 HOH A 58 1358 179 HOH HOH . 
E 4 HOH A 59 1359 32 HOH HOH . 
E 4 HOH A 60 1360 189 HOH HOH . 
E 4 HOH A 61 1361 183 HOH HOH . 
E 4 HOH A 62 1362 121 HOH HOH . 
E 4 HOH A 63 1363 188 HOH HOH . 
E 4 HOH A 64 1364 65 HOH HOH . 
E 4 HOH A 65 1365 185 HOH HOH . 
E 4 HOH A 66 1366 199 HOH HOH . 
E 4 HOH A 67 1367 95 HOH HOH . 
E 4 HOH A 68 1368 180 HOH HOH . 
E 4 HOH A 69 1369 187 HOH HOH . 
E 4 HOH A 70 1370 85 HOH HOH . 
E 4 HOH A 71 1371 130 HOH HOH . 
E 4 HOH A 72 1372 94 HOH HOH . 
E 4 HOH A 73 1373 126 HOH HOH . 
E 4 HOH A 74 1374 172 HOH HOH . 
E 4 HOH A 75 1375 213 HOH HOH . 
E 4 HOH A 76 1376 91 HOH HOH . 
E 4 HOH A 77 1377 87 HOH HOH . 
E 4 HOH A 78 1378 92 HOH HOH . 
E 4 HOH A 79 1379 182 HOH HOH . 
E 4 HOH A 80 1380 110 HOH HOH . 
E 4 HOH A 81 1381 170 HOH HOH . 
E 4 HOH A 82 1382 48 HOH HOH . 
E 4 HOH A 83 1383 181 HOH HOH . 
E 4 HOH A 84 1384 122 HOH HOH . 
E 4 HOH A 85 1385 178 HOH HOH . 
E 4 HOH A 86 1386 184 HOH HOH . 
E 4 HOH A 87 1387 174 HOH HOH . 
F 4 HOH B 1 1301 100 HOH HOH . 
F 4 HOH B 2 1302 171 HOH HOH . 
F 4 HOH B 3 1303 198 HOH HOH . 
F 4 HOH B 4 1304 82 HOH HOH . 
F 4 HOH B 5 1305 147 HOH HOH . 
F 4 HOH B 6 1306 54 HOH HOH . 
F 4 HOH B 7 1307 90 HOH HOH . 
F 4 HOH B 8 1308 1 HOH HOH . 
F 4 HOH B 9 1309 191 HOH HOH . 
F 4 HOH B 10 1310 73 HOH HOH . 
F 4 HOH B 11 1311 29 HOH HOH . 
F 4 HOH B 12 1312 4 HOH HOH . 
F 4 HOH B 13 1313 28 HOH HOH . 
F 4 HOH B 14 1314 68 HOH HOH . 
F 4 HOH B 15 1315 8 HOH HOH . 
F 4 HOH B 16 1316 81 HOH HOH . 
F 4 HOH B 17 1317 109 HOH HOH . 
F 4 HOH B 18 1318 154 HOH HOH . 
F 4 HOH B 19 1319 166 HOH HOH . 
F 4 HOH B 20 1320 7 HOH HOH . 
F 4 HOH B 21 1321 24 HOH HOH . 
F 4 HOH B 22 1322 114 HOH HOH . 
F 4 HOH B 23 1323 203 HOH HOH . 
F 4 HOH B 24 1324 79 HOH HOH . 
F 4 HOH B 25 1325 35 HOH HOH . 
F 4 HOH B 26 1326 15 HOH HOH . 
F 4 HOH B 27 1327 197 HOH HOH . 
F 4 HOH B 28 1328 140 HOH HOH . 
F 4 HOH B 29 1329 148 HOH HOH . 
F 4 HOH B 30 1330 16 HOH HOH . 
F 4 HOH B 31 1331 49 HOH HOH . 
F 4 HOH B 32 1332 46 HOH HOH . 
F 4 HOH B 33 1333 11 HOH HOH . 
F 4 HOH B 34 1334 9 HOH HOH . 
F 4 HOH B 35 1335 6 HOH HOH . 
F 4 HOH B 36 1336 41 HOH HOH . 
F 4 HOH B 37 1337 40 HOH HOH . 
F 4 HOH B 38 1338 88 HOH HOH . 
F 4 HOH B 39 1339 21 HOH HOH . 
F 4 HOH B 40 1340 160 HOH HOH . 
F 4 HOH B 41 1341 12 HOH HOH . 
F 4 HOH B 42 1342 138 HOH HOH . 
F 4 HOH B 43 1343 78 HOH HOH . 
F 4 HOH B 44 1344 152 HOH HOH . 
F 4 HOH B 45 1345 39 HOH HOH . 
F 4 HOH B 46 1346 159 HOH HOH . 
F 4 HOH B 47 1347 38 HOH HOH . 
F 4 HOH B 48 1348 157 HOH HOH . 
F 4 HOH B 49 1349 209 HOH HOH . 
F 4 HOH B 50 1350 132 HOH HOH . 
F 4 HOH B 51 1351 200 HOH HOH . 
F 4 HOH B 52 1352 22 HOH HOH . 
F 4 HOH B 53 1353 10 HOH HOH . 
F 4 HOH B 54 1354 59 HOH HOH . 
F 4 HOH B 55 1355 192 HOH HOH . 
F 4 HOH B 56 1356 26 HOH HOH . 
F 4 HOH B 57 1357 50 HOH HOH . 
F 4 HOH B 58 1358 51 HOH HOH . 
F 4 HOH B 59 1359 99 HOH HOH . 
F 4 HOH B 60 1360 131 HOH HOH . 
F 4 HOH B 61 1361 205 HOH HOH . 
F 4 HOH B 62 1362 61 HOH HOH . 
F 4 HOH B 63 1363 31 HOH HOH . 
F 4 HOH B 64 1364 42 HOH HOH . 
F 4 HOH B 65 1365 137 HOH HOH . 
F 4 HOH B 66 1366 134 HOH HOH . 
F 4 HOH B 67 1367 3 HOH HOH . 
F 4 HOH B 68 1368 37 HOH HOH . 
F 4 HOH B 69 1369 53 HOH HOH . 
F 4 HOH B 70 1370 208 HOH HOH . 
F 4 HOH B 71 1371 135 HOH HOH . 
F 4 HOH B 72 1372 77 HOH HOH . 
F 4 HOH B 73 1373 165 HOH HOH . 
F 4 HOH B 74 1374 34 HOH HOH . 
F 4 HOH B 75 1375 143 HOH HOH . 
F 4 HOH B 76 1376 60 HOH HOH . 
F 4 HOH B 77 1377 5 HOH HOH . 
F 4 HOH B 78 1378 13 HOH HOH . 
F 4 HOH B 79 1379 69 HOH HOH . 
F 4 HOH B 80 1380 2 HOH HOH . 
F 4 HOH B 81 1381 133 HOH HOH . 
F 4 HOH B 82 1382 18 HOH HOH . 
F 4 HOH B 83 1383 20 HOH HOH . 
F 4 HOH B 84 1384 43 HOH HOH . 
F 4 HOH B 85 1385 62 HOH HOH . 
F 4 HOH B 86 1386 193 HOH HOH . 
F 4 HOH B 87 1387 115 HOH HOH . 
F 4 HOH B 88 1388 214 HOH HOH . 
F 4 HOH B 89 1389 162 HOH HOH . 
F 4 HOH B 90 1390 118 HOH HOH . 
F 4 HOH B 91 1391 146 HOH HOH . 
F 4 HOH B 92 1392 161 HOH HOH . 
F 4 HOH B 93 1393 206 HOH HOH . 
F 4 HOH B 94 1394 194 HOH HOH . 
F 4 HOH B 95 1395 113 HOH HOH . 
F 4 HOH B 96 1396 142 HOH HOH . 
F 4 HOH B 97 1397 201 HOH HOH . 
F 4 HOH B 98 1398 202 HOH HOH . 
F 4 HOH B 99 1399 204 HOH HOH . 
F 4 HOH B 100 1400 117 HOH HOH . 
F 4 HOH B 101 1401 144 HOH HOH . 
F 4 HOH B 102 1402 141 HOH HOH . 
F 4 HOH B 103 1403 196 HOH HOH . 
F 4 HOH B 104 1404 211 HOH HOH . 
F 4 HOH B 105 1405 145 HOH HOH . 
F 4 HOH B 106 1406 116 HOH HOH . 
F 4 HOH B 107 1407 127 HOH HOH . 
F 4 HOH B 108 1408 158 HOH HOH . 
F 4 HOH B 109 1409 136 HOH HOH . 
F 4 HOH B 110 1410 83 HOH HOH . 
F 4 HOH B 111 1411 155 HOH HOH . 
F 4 HOH B 112 1412 44 HOH HOH . 
F 4 HOH B 113 1413 76 HOH HOH . 
F 4 HOH B 114 1414 156 HOH HOH . 
F 4 HOH B 115 1415 163 HOH HOH . 
F 4 HOH B 116 1416 151 HOH HOH . 
F 4 HOH B 117 1417 80 HOH HOH . 
F 4 HOH B 118 1418 19 HOH HOH . 
F 4 HOH B 119 1419 45 HOH HOH . 
F 4 HOH B 120 1420 164 HOH HOH . 
F 4 HOH B 121 1421 215 HOH HOH . 
F 4 HOH B 122 1422 153 HOH HOH . 
F 4 HOH B 123 1423 195 HOH HOH . 
F 4 HOH B 124 1424 212 HOH HOH . 
F 4 HOH B 125 1425 149 HOH HOH . 
F 4 HOH B 126 1426 173 HOH HOH . 
F 4 HOH B 127 1427 47 HOH HOH . 
F 4 HOH B 128 1428 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 48.609 140.019 -5.32 1 28.31 ? S DMS 1201 B 1 
HETATM 2 O O DMS . . . D 3 49.306 141.244 -5.548 1 18.47 ? O DMS 1201 B 1 
HETATM 3 C C1 DMS . . . D 3 48.022 139.326 -6.787 1 27.27 ? C1 DMS 1201 B 1 
HETATM 4 C C2 DMS . . . D 3 49.793 138.997 -4.583 1 30.8 ? C2 DMS 1201 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           452 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#