data_5KUK # _model_server_result.job_id ez7LPZcZ_DoKV651G8tqbg _model_server_result.datetime_utc '2024-10-18 21:30:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kuk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":508}' # _entry.id 5KUK # _exptl.entry_id 5KUK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KUK _cell.length_a 82.695 _cell.length_b 82.695 _cell.length_c 182.441 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 88 A CYS 123 1_555 A SG CYS 120 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A O THR 108 A THR 143 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc2 A O THR 108 A THR 143 1_555 D K K . A K 503 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc3 A O THR 108 A THR 143 1_555 E K K . A K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.023 ? metalc ? metalc4 A OG1 THR 108 A THR 143 1_555 E K K . A K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc5 A O THR 108 A THR 143 1_555 E K K . A K 504 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.023 ? metalc ? metalc6 A OG1 THR 108 A THR 143 1_555 E K K . A K 504 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc7 A O ILE 109 A ILE 144 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc8 A O ILE 109 A ILE 144 1_555 C K K . A K 502 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? metalc ? metalc9 A O ILE 109 A ILE 144 1_555 D K K . A K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc10 A O ILE 109 A ILE 144 1_555 D K K . A K 503 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc11 A O GLY 110 A GLY 145 1_555 B K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? metalc ? metalc12 A O GLY 110 A GLY 145 1_555 B K K . A K 501 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.053 ? metalc ? metalc13 A O GLY 110 A GLY 145 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3 ? metalc ? metalc14 A O GLY 110 A GLY 145 1_555 C K K . A K 502 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3 ? metalc ? metalc15 A O TYR 111 A TYR 146 1_555 B K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? metalc ? metalc16 A O TYR 111 A TYR 146 1_555 B K K . A K 501 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? metalc ? metalc17 F K K . A K 505 1_555 L O HOH . A HOH 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.309 ? metalc ? metalc18 F K K . A K 505 1_555 L O HOH . A HOH 769 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.309 ? metalc ? metalc19 F K K . A K 505 1_555 L O HOH . A HOH 786 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? metalc ? metalc20 F K K . A K 505 1_555 L O HOH . A HOH 786 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.191 ? metalc ? metalc21 G K K . A K 506 1_555 L O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.487 ? metalc ? metalc22 G K K . A K 506 1_555 L O HOH . A HOH 602 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.487 ? metalc ? metalc23 G K K . A K 506 1_555 L O HOH . A HOH 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc24 G K K . A K 506 1_555 L O HOH . A HOH 727 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc25 G K K . A K 506 1_555 L O HOH . A HOH 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc26 G K K . A K 506 1_555 L O HOH . A HOH 759 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc27 J K K . A K 509 1_555 L O HOH . A HOH 766 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.038 ? metalc ? metalc28 J K K . A K 509 1_555 L O HOH . A HOH 766 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.038 ? metalc ? metalc29 J K K . A K 509 1_555 L O HOH . A HOH 775 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.284 ? metalc ? metalc30 J K K . A K 509 1_555 L O HOH . A HOH 775 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.284 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5KUK _atom_sites.fract_transf_matrix[1][1] 0.012093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 501 501 K K . C 2 K A 1 502 502 K K . D 2 K A 1 503 503 K K . E 2 K A 1 504 504 K K . F 2 K A 1 505 505 K K . G 2 K A 1 506 506 K K . H 2 K A 1 507 507 K K . I 2 K A 1 508 508 K K . J 2 K A 1 509 509 K K . K 3 DMU A 1 510 601 DMU DMU . L 4 HOH A 1 601 172 HOH HOH . L 4 HOH A 2 602 108 HOH HOH . L 4 HOH A 3 603 169 HOH HOH . L 4 HOH A 4 604 35 HOH HOH . L 4 HOH A 5 605 85 HOH HOH . L 4 HOH A 6 606 103 HOH HOH . L 4 HOH A 7 607 22 HOH HOH . L 4 HOH A 8 608 40 HOH HOH . L 4 HOH A 9 609 177 HOH HOH . L 4 HOH A 10 610 149 HOH HOH . L 4 HOH A 11 611 112 HOH HOH . L 4 HOH A 12 612 173 HOH HOH . L 4 HOH A 13 613 78 HOH HOH . L 4 HOH A 14 614 180 HOH HOH . L 4 HOH A 15 615 62 HOH HOH . L 4 HOH A 16 616 19 HOH HOH . L 4 HOH A 17 617 97 HOH HOH . L 4 HOH A 18 618 135 HOH HOH . L 4 HOH A 19 619 81 HOH HOH . L 4 HOH A 20 620 99 HOH HOH . L 4 HOH A 21 621 56 HOH HOH . L 4 HOH A 22 622 144 HOH HOH . L 4 HOH A 23 623 47 HOH HOH . L 4 HOH A 24 624 41 HOH HOH . L 4 HOH A 25 625 141 HOH HOH . L 4 HOH A 26 626 6 HOH HOH . L 4 HOH A 27 627 8 HOH HOH . L 4 HOH A 28 628 126 HOH HOH . L 4 HOH A 29 629 166 HOH HOH . L 4 HOH A 30 630 157 HOH HOH . L 4 HOH A 31 631 119 HOH HOH . L 4 HOH A 32 632 61 HOH HOH . L 4 HOH A 33 633 15 HOH HOH . L 4 HOH A 34 634 205 HOH HOH . L 4 HOH A 35 635 121 HOH HOH . L 4 HOH A 36 636 32 HOH HOH . L 4 HOH A 37 637 160 HOH HOH . L 4 HOH A 38 638 188 HOH HOH . L 4 HOH A 39 639 16 HOH HOH . L 4 HOH A 40 640 18 HOH HOH . L 4 HOH A 41 641 49 HOH HOH . L 4 HOH A 42 642 38 HOH HOH . L 4 HOH A 43 643 153 HOH HOH . L 4 HOH A 44 644 123 HOH HOH . L 4 HOH A 45 645 77 HOH HOH . L 4 HOH A 46 646 174 HOH HOH . L 4 HOH A 47 647 59 HOH HOH . L 4 HOH A 48 648 152 HOH HOH . L 4 HOH A 49 649 30 HOH HOH . L 4 HOH A 50 650 20 HOH HOH . L 4 HOH A 51 651 75 HOH HOH . L 4 HOH A 52 652 67 HOH HOH . L 4 HOH A 53 653 71 HOH HOH . L 4 HOH A 54 654 206 HOH HOH . L 4 HOH A 55 655 21 HOH HOH . L 4 HOH A 56 656 43 HOH HOH . L 4 HOH A 57 657 84 HOH HOH . L 4 HOH A 58 658 128 HOH HOH . L 4 HOH A 59 659 65 HOH HOH . L 4 HOH A 60 660 113 HOH HOH . L 4 HOH A 61 661 44 HOH HOH . L 4 HOH A 62 662 86 HOH HOH . L 4 HOH A 63 663 26 HOH HOH . L 4 HOH A 64 664 96 HOH HOH . L 4 HOH A 65 665 87 HOH HOH . L 4 HOH A 66 666 207 HOH HOH . L 4 HOH A 67 667 29 HOH HOH . L 4 HOH A 68 668 91 HOH HOH . L 4 HOH A 69 669 4 HOH HOH . L 4 HOH A 70 670 76 HOH HOH . L 4 HOH A 71 671 101 HOH HOH . L 4 HOH A 72 672 5 HOH HOH . L 4 HOH A 73 673 3 HOH HOH . L 4 HOH A 74 674 37 HOH HOH . L 4 HOH A 75 675 125 HOH HOH . L 4 HOH A 76 676 98 HOH HOH . L 4 HOH A 77 677 60 HOH HOH . L 4 HOH A 78 678 158 HOH HOH . L 4 HOH A 79 679 58 HOH HOH . L 4 HOH A 80 680 131 HOH HOH . L 4 HOH A 81 681 133 HOH HOH . L 4 HOH A 82 682 167 HOH HOH . L 4 HOH A 83 683 161 HOH HOH . L 4 HOH A 84 684 90 HOH HOH . L 4 HOH A 85 685 204 HOH HOH . L 4 HOH A 86 686 80 HOH HOH . L 4 HOH A 87 687 150 HOH HOH . L 4 HOH A 88 688 120 HOH HOH . L 4 HOH A 89 689 155 HOH HOH . L 4 HOH A 90 690 25 HOH HOH . L 4 HOH A 91 691 130 HOH HOH . L 4 HOH A 92 692 33 HOH HOH . L 4 HOH A 93 693 117 HOH HOH . L 4 HOH A 94 694 66 HOH HOH . L 4 HOH A 95 695 182 HOH HOH . L 4 HOH A 96 696 199 HOH HOH . L 4 HOH A 97 697 27 HOH HOH . L 4 HOH A 98 698 72 HOH HOH . L 4 HOH A 99 699 171 HOH HOH . L 4 HOH A 100 700 17 HOH HOH . L 4 HOH A 101 701 129 HOH HOH . L 4 HOH A 102 702 190 HOH HOH . L 4 HOH A 103 703 63 HOH HOH . L 4 HOH A 104 704 200 HOH HOH . L 4 HOH A 105 705 24 HOH HOH . L 4 HOH A 106 706 138 HOH HOH . L 4 HOH A 107 707 9 HOH HOH . L 4 HOH A 108 708 147 HOH HOH . L 4 HOH A 109 709 70 HOH HOH . L 4 HOH A 110 710 165 HOH HOH . L 4 HOH A 111 711 186 HOH HOH . L 4 HOH A 112 712 124 HOH HOH . L 4 HOH A 113 713 203 HOH HOH . L 4 HOH A 114 714 176 HOH HOH . L 4 HOH A 115 715 28 HOH HOH . L 4 HOH A 116 716 2 HOH HOH . L 4 HOH A 117 717 45 HOH HOH . L 4 HOH A 118 718 178 HOH HOH . L 4 HOH A 119 719 46 HOH HOH . L 4 HOH A 120 720 192 HOH HOH . L 4 HOH A 121 721 31 HOH HOH . L 4 HOH A 122 722 184 HOH HOH . L 4 HOH A 123 723 48 HOH HOH . L 4 HOH A 124 724 151 HOH HOH . L 4 HOH A 125 725 163 HOH HOH . L 4 HOH A 126 726 189 HOH HOH . L 4 HOH A 127 727 106 HOH HOH . L 4 HOH A 128 728 156 HOH HOH . L 4 HOH A 129 729 39 HOH HOH . L 4 HOH A 130 730 168 HOH HOH . L 4 HOH A 131 731 159 HOH HOH . L 4 HOH A 132 732 210 HOH HOH . L 4 HOH A 133 733 79 HOH HOH . L 4 HOH A 134 734 7 HOH HOH . L 4 HOH A 135 735 92 HOH HOH . L 4 HOH A 136 736 164 HOH HOH . L 4 HOH A 137 737 183 HOH HOH . L 4 HOH A 138 738 146 HOH HOH . L 4 HOH A 139 739 64 HOH HOH . L 4 HOH A 140 740 136 HOH HOH . L 4 HOH A 141 741 10 HOH HOH . L 4 HOH A 142 742 127 HOH HOH . L 4 HOH A 143 743 134 HOH HOH . L 4 HOH A 144 744 116 HOH HOH . L 4 HOH A 145 745 142 HOH HOH . L 4 HOH A 146 746 187 HOH HOH . L 4 HOH A 147 747 137 HOH HOH . L 4 HOH A 148 748 36 HOH HOH . L 4 HOH A 149 749 139 HOH HOH . L 4 HOH A 150 750 170 HOH HOH . L 4 HOH A 151 751 193 HOH HOH . L 4 HOH A 152 752 148 HOH HOH . L 4 HOH A 153 753 68 HOH HOH . L 4 HOH A 154 754 83 HOH HOH . L 4 HOH A 155 755 34 HOH HOH . L 4 HOH A 156 756 198 HOH HOH . L 4 HOH A 157 757 185 HOH HOH . L 4 HOH A 158 758 201 HOH HOH . L 4 HOH A 159 759 109 HOH HOH . L 4 HOH A 160 760 195 HOH HOH . L 4 HOH A 161 761 42 HOH HOH . L 4 HOH A 162 762 208 HOH HOH . L 4 HOH A 163 763 114 HOH HOH . L 4 HOH A 164 764 143 HOH HOH . L 4 HOH A 165 765 162 HOH HOH . L 4 HOH A 166 766 1 HOH HOH . L 4 HOH A 167 767 82 HOH HOH . L 4 HOH A 168 768 209 HOH HOH . L 4 HOH A 169 769 110 HOH HOH . L 4 HOH A 170 770 197 HOH HOH . L 4 HOH A 171 771 154 HOH HOH . L 4 HOH A 172 772 111 HOH HOH . L 4 HOH A 173 773 202 HOH HOH . L 4 HOH A 174 774 145 HOH HOH . L 4 HOH A 175 775 140 HOH HOH . L 4 HOH A 176 776 115 HOH HOH . L 4 HOH A 177 777 93 HOH HOH . L 4 HOH A 178 778 191 HOH HOH . L 4 HOH A 179 779 196 HOH HOH . L 4 HOH A 180 780 122 HOH HOH . L 4 HOH A 181 781 194 HOH HOH . L 4 HOH A 182 782 181 HOH HOH . L 4 HOH A 183 783 100 HOH HOH . L 4 HOH A 184 784 73 HOH HOH . L 4 HOH A 185 785 118 HOH HOH . L 4 HOH A 186 786 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z -49.987 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 93.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 508 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #