data_5KUM
#
_model_server_result.job_id            UAgIvySFUZ4FO4UZ-Iglkw 
_model_server_result.datetime_utc      '2024-10-18 21:20:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5kum 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":409}' 
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_entry.id    5KUM 
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_exptl.entry_id    5KUM 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              39.098 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'POTASSIUM ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5KUM 
_cell.length_a            81.303 
_cell.length_b            81.303 
_cell.length_c            183.572 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5KUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 88 A CYS 123 1_555 A SG CYS 120 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc1 A O THR 108 A THR 143 1_555 E K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc2 A O THR 108 A THR 143 1_555 E K K . A K 404 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc3 A O THR 108 A THR 143 1_555 F K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? 
metalc ? metalc4 A OG1 THR 108 A THR 143 1_555 F K K . A K 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? 
metalc ? metalc5 A O THR 108 A THR 143 1_555 F K K . A K 405 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? 
metalc ? metalc6 A OG1 THR 108 A THR 143 1_555 F K K . A K 405 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? 
metalc ? metalc7 A O ILE 109 A ILE 144 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? 
metalc ? metalc8 A O ILE 109 A ILE 144 1_555 D K K . A K 403 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? 
metalc ? metalc9 A O ILE 109 A ILE 144 1_555 E K K . A K 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? 
metalc ? metalc10 A O ILE 109 A ILE 144 1_555 E K K . A K 404 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? 
metalc ? metalc11 A O GLY 110 A GLY 145 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? 
metalc ? metalc12 A O GLY 110 A GLY 145 1_555 C K K . A K 402 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? 
metalc ? metalc13 A O GLY 110 A GLY 145 1_555 D K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? 
metalc ? metalc14 A O GLY 110 A GLY 145 1_555 D K K . A K 403 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? 
metalc ? metalc15 A O TYR 111 A TYR 146 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? 
metalc ? metalc16 A O TYR 111 A TYR 146 1_555 C K K . A K 402 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? 
#
_chem_comp.formula           'K 1' 
_chem_comp.formula_weight    39.098 
_chem_comp.id                K 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'POTASSIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     5KUM 
_atom_sites.fract_transf_matrix[1][1]    0.0123 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0123 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005447 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PIO A 1 401 400 PIO PIO . 
C 3 K A 1 402 501 K K . 
D 3 K A 1 403 502 K K . 
E 3 K A 1 404 503 K K . 
F 3 K A 1 405 504 K K . 
G 3 K A 1 406 505 K K . 
H 3 K A 1 407 506 K K . 
I 3 K A 1 408 507 K K . 
J 3 K A 1 409 508 K K . 
K 4 DMU A 1 410 601 DMU DMU . 
L 5 HOH A 1 501 730 HOH HOH . 
L 5 HOH A 2 502 713 HOH HOH . 
L 5 HOH A 3 503 721 HOH HOH . 
L 5 HOH A 4 504 724 HOH HOH . 
L 5 HOH A 5 505 709 HOH HOH . 
L 5 HOH A 6 506 735 HOH HOH . 
L 5 HOH A 7 507 740 HOH HOH . 
L 5 HOH A 8 508 702 HOH HOH . 
L 5 HOH A 9 509 731 HOH HOH . 
L 5 HOH A 10 510 742 HOH HOH . 
L 5 HOH A 11 511 746 HOH HOH . 
L 5 HOH A 12 512 708 HOH HOH . 
L 5 HOH A 13 513 711 HOH HOH . 
L 5 HOH A 14 514 738 HOH HOH . 
L 5 HOH A 15 515 743 HOH HOH . 
L 5 HOH A 16 516 745 HOH HOH . 
L 5 HOH A 17 517 739 HOH HOH . 
L 5 HOH A 18 518 723 HOH HOH . 
L 5 HOH A 19 519 715 HOH HOH . 
L 5 HOH A 20 520 706 HOH HOH . 
L 5 HOH A 21 521 737 HOH HOH . 
L 5 HOH A 22 522 718 HOH HOH . 
L 5 HOH A 23 523 720 HOH HOH . 
L 5 HOH A 24 524 701 HOH HOH . 
L 5 HOH A 25 525 719 HOH HOH . 
L 5 HOH A 26 526 710 HOH HOH . 
L 5 HOH A 27 527 703 HOH HOH . 
L 5 HOH A 28 528 707 HOH HOH . 
L 5 HOH A 29 529 727 HOH HOH . 
L 5 HOH A 30 530 733 HOH HOH . 
L 5 HOH A 31 531 722 HOH HOH . 
L 5 HOH A 32 532 736 HOH HOH . 
L 5 HOH A 33 533 734 HOH HOH . 
L 5 HOH A 34 534 741 HOH HOH . 
L 5 HOH A 35 535 732 HOH HOH . 
L 5 HOH A 36 536 714 HOH HOH . 
L 5 HOH A 37 537 747 HOH HOH . 
L 5 HOH A 38 538 716 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           K 
_atom_site.label_atom_id         K 
_atom_site.label_comp_id         K 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               0 
_atom_site.Cartn_y               0 
_atom_site.Cartn_z               28.047 
_atom_site.occupancy             0.25 
_atom_site.B_iso_or_equiv        102.08 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          K 
_atom_site.auth_comp_id          K 
_atom_site.auth_seq_id           409 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#