data_5KX7 # _model_server_result.job_id tnWMJrHpIj-QvZfJf1O0hQ _model_server_result.datetime_utc '2024-12-27 08:41:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kx7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":9901}' # _entry.id 5KX7 # _exptl.entry_id 5KX7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.325 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(3-aminocarbonyl-1-methyl-pyrazol-4-yl)-6-(1-methylpyrazol-4-yl)pyridine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KX7 _cell.length_a 87.8 _cell.length_b 114.28 _cell.length_c 139.44 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KX7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A 1 1 B,C 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TPO 183 A TPO 342 1_555 A N VAL 184 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale2 A C MET 185 A MET 344 1_555 A N TPO 186 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 A C TPO 186 A TPO 345 1_555 A N SEP 187 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale4 A C SEP 187 A SEP 346 1_555 A N ARG 188 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? covale ? covale5 B C TPO 183 B TPO 342 1_555 B N VAL 184 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale6 B C MET 185 B MET 344 1_555 B N TPO 186 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale7 B C TPO 186 B TPO 345 1_555 B N SEP 187 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale8 B C SEP 187 B SEP 346 1_555 B N ARG 188 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.36 ? # _chem_comp.formula 'C15 H15 N7 O2' _chem_comp.formula_weight 325.325 _chem_comp.id 6YD _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(3-aminocarbonyl-1-methyl-pyrazol-4-yl)-6-(1-methylpyrazol-4-yl)pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 N13 6YD sing 1 n n N13 N12 6YD sing 2 n y N13 C14 6YD sing 3 n y N12 C11 6YD doub 4 n y C14 C10 6YD doub 5 n y C11 C10 6YD sing 6 n y N22 C21 6YD sing 7 n n O23 C21 6YD doub 8 n n C10 C06 6YD sing 9 n n C21 C19 6YD sing 10 n n C06 N05 6YD doub 11 n y C06 C07 6YD sing 12 n y N05 C04 6YD sing 13 n y C19 N18 6YD doub 14 n y C19 C15 6YD sing 15 n y C07 C08 6YD doub 16 n y N18 N17 6YD sing 17 n y N01 C15 6YD sing 18 n n N01 C02 6YD sing 19 n n C15 C16 6YD doub 20 n y C04 C02 6YD sing 21 n n C04 C09 6YD doub 22 n y C08 C09 6YD sing 23 n y C02 O03 6YD doub 24 n n N17 C16 6YD sing 25 n y N17 C20 6YD sing 26 n n N01 H1 6YD sing 27 n n C07 H2 6YD sing 28 n n C08 H3 6YD sing 29 n n C09 H4 6YD sing 30 n n C11 H5 6YD sing 31 n n C14 H6 6YD sing 32 n n C16 H7 6YD sing 33 n n C20 H8 6YD sing 34 n n C20 H9 6YD sing 35 n n C20 H10 6YD sing 36 n n N22 H11 6YD sing 37 n n N22 H12 6YD sing 38 n n C24 H13 6YD sing 39 n n C24 H14 6YD sing 40 n n C24 H15 6YD sing 41 n n # _atom_sites.entry_id 5KX7 _atom_sites.fract_transf_matrix[1][1] 0.01139 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00875 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 6YD _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 9901 _pdbx_nonpoly_scheme.auth_seq_num 9901 _pdbx_nonpoly_scheme.pdb_mon_id 6YD _pdbx_nonpoly_scheme.auth_mon_id SCH _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 6YD . . . C 2 34.823 40.437 60.755 1 57.19 ? N01 6YD 9901 B 1 HETATM 2 C C02 6YD . . . C 2 33.862 40.298 61.726 1 61.15 ? C02 6YD 9901 B 1 HETATM 3 O O03 6YD . . . C 2 34.15 40.103 62.902 1 64.55 ? O03 6YD 9901 B 1 HETATM 4 C C04 6YD . . . C 2 32.432 40.24 61.258 1 64.79 ? C04 6YD 9901 B 1 HETATM 5 N N05 6YD . . . C 2 32.193 40.474 59.958 1 70 ? N05 6YD 9901 B 1 HETATM 6 C C06 6YD . . . C 2 30.934 40.319 59.515 1 74.87 ? C06 6YD 9901 B 1 HETATM 7 C C07 6YD . . . C 2 29.888 39.904 60.335 1 71.25 ? C07 6YD 9901 B 1 HETATM 8 C C08 6YD . . . C 2 30.157 39.639 61.662 1 64.76 ? C08 6YD 9901 B 1 HETATM 9 C C09 6YD . . . C 2 31.442 39.811 62.14 1 65.02 ? C09 6YD 9901 B 1 HETATM 10 C C10 6YD . . . C 2 30.724 40.579 58.072 1 77.95 ? C10 6YD 9901 B 1 HETATM 11 C C11 6YD . . . C 2 29.534 40.825 57.357 1 77.39 ? C11 6YD 9901 B 1 HETATM 12 N N12 6YD . . . C 2 29.755 41.004 56.066 1 79.69 ? N12 6YD 9901 B 1 HETATM 13 N N13 6YD . . . C 2 31.141 40.852 55.927 1 80.27 ? N13 6YD 9901 B 1 HETATM 14 C C14 6YD . . . C 2 31.707 40.593 57.111 1 80.26 ? C14 6YD 9901 B 1 HETATM 15 C C15 6YD . . . C 2 36.207 40.269 61.019 1 58.16 ? C15 6YD 9901 B 1 HETATM 16 C C16 6YD . . . C 2 36.938 40.26 62.237 1 53.12 ? C16 6YD 9901 B 1 HETATM 17 N N17 6YD . . . C 2 38.227 40.072 61.93 1 49.31 ? N17 6YD 9901 B 1 HETATM 18 N N18 6YD . . . C 2 38.45 39.94 60.6 1 53.44 ? N18 6YD 9901 B 1 HETATM 19 C C19 6YD . . . C 2 37.235 40.056 60.05 1 59.24 ? C19 6YD 9901 B 1 HETATM 20 C C20 6YD . . . C 2 39.353 39.975 62.851 1 47.01 ? C20 6YD 9901 B 1 HETATM 21 C C21 6YD . . . C 2 37.041 39.925 58.598 1 61.46 ? C21 6YD 9901 B 1 HETATM 22 N N22 6YD . . . C 2 38.029 39.351 57.911 1 58.14 ? N22 6YD 9901 B 1 HETATM 23 O O23 6YD . . . C 2 35.969 40.305 58.071 1 63.66 ? O23 6YD 9901 B 1 HETATM 24 C C24 6YD . . . C 2 31.809 40.967 54.639 1 79.93 ? C24 6YD 9901 B 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 440 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #