data_5KY0 # _model_server_result.job_id AJS5QD8lvNWWJbeJRDJfTw _model_server_result.datetime_utc '2024-11-23 00:59:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ky0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5KY0 # _exptl.entry_id 5KY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KY0 _cell.length_a 52.101 _cell.length_b 66.476 _cell.length_c 110.277 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 43 1_555 A SG CYS 16 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 102 A CYS 131 1_555 A SG CYS 116 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 A SG CYS 225 A CYS 254 1_555 A SG CYS 259 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 243 A CYS 272 1_555 A SG CYS 330 A CYS 359 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.054 ? disulf ? disulf5 A SG CYS 243 A CYS 272 1_555 A SG CYS 330 A CYS 359 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 5 B CYS 456 1_555 B SG CYS 16 B CYS 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 B SG CYS 10 B CYS 461 1_555 B SG CYS 25 B CYS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 B SG CYS 27 B CYS 478 1_555 B SG CYS 36 B CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? covale ? covale1 A ND2 ASN 38 A ASN 67 1_555 C C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale2 A ND2 ASN 136 A ASN 165 1_555 D C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 5KY0 _atom_sites.fract_transf_matrix[1][1] 0.019193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 401 401 NAG NAG . D 3 NAG A 1 402 402 NAG NAG . E 4 GDP A 1 403 1 GDP GDP . F 5 GOL A 1 404 1 GOL GOL . G 5 GOL A 1 405 2 GOL GOL . H 6 HOH A 1 501 501 HOH HOH . H 6 HOH A 2 502 278 HOH HOH . H 6 HOH A 3 503 475 HOH HOH . H 6 HOH A 4 504 371 HOH HOH . H 6 HOH A 5 505 308 HOH HOH . H 6 HOH A 6 506 246 HOH HOH . H 6 HOH A 7 507 353 HOH HOH . H 6 HOH A 8 508 448 HOH HOH . H 6 HOH A 9 509 174 HOH HOH . H 6 HOH A 10 510 511 HOH HOH . H 6 HOH A 11 511 361 HOH HOH . H 6 HOH A 12 512 333 HOH HOH . H 6 HOH A 13 513 121 HOH HOH . H 6 HOH A 14 514 478 HOH HOH . H 6 HOH A 15 515 499 HOH HOH . H 6 HOH A 16 516 488 HOH HOH . H 6 HOH A 17 517 435 HOH HOH . H 6 HOH A 18 518 324 HOH HOH . H 6 HOH A 19 519 173 HOH HOH . H 6 HOH A 20 520 91 HOH HOH . H 6 HOH A 21 521 143 HOH HOH . H 6 HOH A 22 522 363 HOH HOH . H 6 HOH A 23 523 383 HOH HOH . H 6 HOH A 24 524 19 HOH HOH . H 6 HOH A 25 525 440 HOH HOH . H 6 HOH A 26 526 128 HOH HOH . H 6 HOH A 27 527 164 HOH HOH . H 6 HOH A 28 528 120 HOH HOH . H 6 HOH A 29 529 306 HOH HOH . H 6 HOH A 30 530 232 HOH HOH . H 6 HOH A 31 531 411 HOH HOH . H 6 HOH A 32 532 56 HOH HOH . H 6 HOH A 33 533 253 HOH HOH . H 6 HOH A 34 534 71 HOH HOH . H 6 HOH A 35 535 357 HOH HOH . H 6 HOH A 36 536 442 HOH HOH . H 6 HOH A 37 537 366 HOH HOH . H 6 HOH A 38 538 328 HOH HOH . H 6 HOH A 39 539 342 HOH HOH . H 6 HOH A 40 540 456 HOH HOH . H 6 HOH A 41 541 341 HOH HOH . H 6 HOH A 42 542 80 HOH HOH . H 6 HOH A 43 543 24 HOH HOH . H 6 HOH A 44 544 385 HOH HOH . H 6 HOH A 45 545 152 HOH HOH . H 6 HOH A 46 546 190 HOH HOH . H 6 HOH A 47 547 77 HOH HOH . H 6 HOH A 48 548 108 HOH HOH . H 6 HOH A 49 549 349 HOH HOH . H 6 HOH A 50 550 484 HOH HOH . H 6 HOH A 51 551 513 HOH HOH . H 6 HOH A 52 552 236 HOH HOH . H 6 HOH A 53 553 396 HOH HOH . H 6 HOH A 54 554 129 HOH HOH . H 6 HOH A 55 555 4 HOH HOH . H 6 HOH A 56 556 397 HOH HOH . H 6 HOH A 57 557 504 HOH HOH . H 6 HOH A 58 558 146 HOH HOH . H 6 HOH A 59 559 300 HOH HOH . H 6 HOH A 60 560 25 HOH HOH . H 6 HOH A 61 561 265 HOH HOH . H 6 HOH A 62 562 348 HOH HOH . H 6 HOH A 63 563 254 HOH HOH . H 6 HOH A 64 564 42 HOH HOH . H 6 HOH A 65 565 55 HOH HOH . H 6 HOH A 66 566 360 HOH HOH . H 6 HOH A 67 567 18 HOH HOH . H 6 HOH A 68 568 219 HOH HOH . H 6 HOH A 69 569 30 HOH HOH . H 6 HOH A 70 570 142 HOH HOH . H 6 HOH A 71 571 321 HOH HOH . H 6 HOH A 72 572 20 HOH HOH . H 6 HOH A 73 573 257 HOH HOH . H 6 HOH A 74 574 89 HOH HOH . H 6 HOH A 75 575 427 HOH HOH . H 6 HOH A 76 576 49 HOH HOH . H 6 HOH A 77 577 106 HOH HOH . H 6 HOH A 78 578 292 HOH HOH . H 6 HOH A 79 579 13 HOH HOH . H 6 HOH A 80 580 87 HOH HOH . H 6 HOH A 81 581 176 HOH HOH . H 6 HOH A 82 582 263 HOH HOH . H 6 HOH A 83 583 11 HOH HOH . H 6 HOH A 84 584 67 HOH HOH . H 6 HOH A 85 585 15 HOH HOH . H 6 HOH A 86 586 377 HOH HOH . H 6 HOH A 87 587 220 HOH HOH . H 6 HOH A 88 588 479 HOH HOH . H 6 HOH A 89 589 78 HOH HOH . H 6 HOH A 90 590 9 HOH HOH . H 6 HOH A 91 591 381 HOH HOH . H 6 HOH A 92 592 241 HOH HOH . H 6 HOH A 93 593 410 HOH HOH . H 6 HOH A 94 594 332 HOH HOH . H 6 HOH A 95 595 269 HOH HOH . H 6 HOH A 96 596 46 HOH HOH . H 6 HOH A 97 597 99 HOH HOH . H 6 HOH A 98 598 35 HOH HOH . H 6 HOH A 99 599 5 HOH HOH . H 6 HOH A 100 600 266 HOH HOH . H 6 HOH A 101 601 68 HOH HOH . H 6 HOH A 102 602 74 HOH HOH . H 6 HOH A 103 603 73 HOH HOH . H 6 HOH A 104 604 34 HOH HOH . H 6 HOH A 105 605 130 HOH HOH . H 6 HOH A 106 606 195 HOH HOH . H 6 HOH A 107 607 233 HOH HOH . H 6 HOH A 108 608 139 HOH HOH . H 6 HOH A 109 609 48 HOH HOH . H 6 HOH A 110 610 94 HOH HOH . H 6 HOH A 111 611 457 HOH HOH . H 6 HOH A 112 612 295 HOH HOH . H 6 HOH A 113 613 405 HOH HOH . H 6 HOH A 114 614 31 HOH HOH . H 6 HOH A 115 615 264 HOH HOH . H 6 HOH A 116 616 3 HOH HOH . H 6 HOH A 117 617 362 HOH HOH . H 6 HOH A 118 618 51 HOH HOH . H 6 HOH A 119 619 69 HOH HOH . H 6 HOH A 120 620 187 HOH HOH . H 6 HOH A 121 621 23 HOH HOH . H 6 HOH A 122 622 256 HOH HOH . H 6 HOH A 123 623 47 HOH HOH . H 6 HOH A 124 624 54 HOH HOH . H 6 HOH A 125 625 141 HOH HOH . H 6 HOH A 126 626 83 HOH HOH . H 6 HOH A 127 627 36 HOH HOH . H 6 HOH A 128 628 250 HOH HOH . H 6 HOH A 129 629 229 HOH HOH . H 6 HOH A 130 630 131 HOH HOH . H 6 HOH A 131 631 70 HOH HOH . H 6 HOH A 132 632 32 HOH HOH . H 6 HOH A 133 633 86 HOH HOH . H 6 HOH A 134 634 62 HOH HOH . H 6 HOH A 135 635 136 HOH HOH . H 6 HOH A 136 636 205 HOH HOH . H 6 HOH A 137 637 33 HOH HOH . H 6 HOH A 138 638 90 HOH HOH . H 6 HOH A 139 639 287 HOH HOH . H 6 HOH A 140 640 22 HOH HOH . H 6 HOH A 141 641 189 HOH HOH . H 6 HOH A 142 642 495 HOH HOH . H 6 HOH A 143 643 199 HOH HOH . H 6 HOH A 144 644 403 HOH HOH . H 6 HOH A 145 645 283 HOH HOH . H 6 HOH A 146 646 192 HOH HOH . H 6 HOH A 147 647 506 HOH HOH . H 6 HOH A 148 648 486 HOH HOH . H 6 HOH A 149 649 59 HOH HOH . H 6 HOH A 150 650 1 HOH HOH . H 6 HOH A 151 651 191 HOH HOH . H 6 HOH A 152 652 45 HOH HOH . H 6 HOH A 153 653 415 HOH HOH . H 6 HOH A 154 654 458 HOH HOH . H 6 HOH A 155 655 374 HOH HOH . H 6 HOH A 156 656 107 HOH HOH . H 6 HOH A 157 657 272 HOH HOH . H 6 HOH A 158 658 115 HOH HOH . H 6 HOH A 159 659 97 HOH HOH . H 6 HOH A 160 660 105 HOH HOH . H 6 HOH A 161 661 463 HOH HOH . H 6 HOH A 162 662 27 HOH HOH . H 6 HOH A 163 663 16 HOH HOH . H 6 HOH A 164 664 320 HOH HOH . H 6 HOH A 165 665 63 HOH HOH . H 6 HOH A 166 666 503 HOH HOH . H 6 HOH A 167 667 92 HOH HOH . H 6 HOH A 168 668 327 HOH HOH . H 6 HOH A 169 669 281 HOH HOH . H 6 HOH A 170 670 230 HOH HOH . H 6 HOH A 171 671 221 HOH HOH . H 6 HOH A 172 672 434 HOH HOH . H 6 HOH A 173 673 7 HOH HOH . H 6 HOH A 174 674 490 HOH HOH . H 6 HOH A 175 675 268 HOH HOH . H 6 HOH A 176 676 132 HOH HOH . H 6 HOH A 177 677 37 HOH HOH . H 6 HOH A 178 678 127 HOH HOH . H 6 HOH A 179 679 137 HOH HOH . H 6 HOH A 180 680 133 HOH HOH . H 6 HOH A 181 681 462 HOH HOH . H 6 HOH A 182 682 389 HOH HOH . H 6 HOH A 183 683 224 HOH HOH . H 6 HOH A 184 684 125 HOH HOH . H 6 HOH A 185 685 446 HOH HOH . H 6 HOH A 186 686 344 HOH HOH . H 6 HOH A 187 687 314 HOH HOH . H 6 HOH A 188 688 376 HOH HOH . H 6 HOH A 189 689 149 HOH HOH . H 6 HOH A 190 690 436 HOH HOH . H 6 HOH A 191 691 492 HOH HOH . H 6 HOH A 192 692 428 HOH HOH . H 6 HOH A 193 693 40 HOH HOH . H 6 HOH A 194 694 21 HOH HOH . H 6 HOH A 195 695 148 HOH HOH . H 6 HOH A 196 696 445 HOH HOH . H 6 HOH A 197 697 12 HOH HOH . H 6 HOH A 198 698 496 HOH HOH . H 6 HOH A 199 699 343 HOH HOH . H 6 HOH A 200 700 382 HOH HOH . H 6 HOH A 201 701 182 HOH HOH . H 6 HOH A 202 702 245 HOH HOH . H 6 HOH A 203 703 52 HOH HOH . H 6 HOH A 204 704 200 HOH HOH . H 6 HOH A 205 705 179 HOH HOH . H 6 HOH A 206 706 28 HOH HOH . H 6 HOH A 207 707 29 HOH HOH . H 6 HOH A 208 708 124 HOH HOH . H 6 HOH A 209 709 510 HOH HOH . H 6 HOH A 210 710 408 HOH HOH . H 6 HOH A 211 711 82 HOH HOH . H 6 HOH A 212 712 50 HOH HOH . H 6 HOH A 213 713 251 HOH HOH . H 6 HOH A 214 714 512 HOH HOH . H 6 HOH A 215 715 274 HOH HOH . H 6 HOH A 216 716 119 HOH HOH . H 6 HOH A 217 717 291 HOH HOH . H 6 HOH A 218 718 289 HOH HOH . H 6 HOH A 219 719 193 HOH HOH . H 6 HOH A 220 720 214 HOH HOH . H 6 HOH A 221 721 88 HOH HOH . H 6 HOH A 222 722 2 HOH HOH . H 6 HOH A 223 723 277 HOH HOH . H 6 HOH A 224 724 154 HOH HOH . H 6 HOH A 225 725 162 HOH HOH . H 6 HOH A 226 726 305 HOH HOH . H 6 HOH A 227 727 17 HOH HOH . H 6 HOH A 228 728 469 HOH HOH . H 6 HOH A 229 729 84 HOH HOH . H 6 HOH A 230 730 279 HOH HOH . H 6 HOH A 231 731 134 HOH HOH . H 6 HOH A 232 732 270 HOH HOH . H 6 HOH A 233 733 66 HOH HOH . H 6 HOH A 234 734 439 HOH HOH . H 6 HOH A 235 735 493 HOH HOH . H 6 HOH A 236 736 113 HOH HOH . H 6 HOH A 237 737 10 HOH HOH . H 6 HOH A 238 738 43 HOH HOH . H 6 HOH A 239 739 101 HOH HOH . H 6 HOH A 240 740 140 HOH HOH . H 6 HOH A 241 741 247 HOH HOH . H 6 HOH A 242 742 138 HOH HOH . H 6 HOH A 243 743 334 HOH HOH . H 6 HOH A 244 744 163 HOH HOH . H 6 HOH A 245 745 26 HOH HOH . H 6 HOH A 246 746 161 HOH HOH . H 6 HOH A 247 747 370 HOH HOH . H 6 HOH A 248 748 426 HOH HOH . H 6 HOH A 249 749 159 HOH HOH . H 6 HOH A 250 750 473 HOH HOH . H 6 HOH A 251 751 116 HOH HOH . H 6 HOH A 252 752 57 HOH HOH . H 6 HOH A 253 753 44 HOH HOH . H 6 HOH A 254 754 151 HOH HOH . H 6 HOH A 255 755 423 HOH HOH . H 6 HOH A 256 756 175 HOH HOH . H 6 HOH A 257 757 156 HOH HOH . H 6 HOH A 258 758 225 HOH HOH . H 6 HOH A 259 759 447 HOH HOH . H 6 HOH A 260 760 196 HOH HOH . H 6 HOH A 261 761 76 HOH HOH . H 6 HOH A 262 762 359 HOH HOH . H 6 HOH A 263 763 432 HOH HOH . H 6 HOH A 264 764 64 HOH HOH . H 6 HOH A 265 765 41 HOH HOH . H 6 HOH A 266 766 72 HOH HOH . H 6 HOH A 267 767 419 HOH HOH . H 6 HOH A 268 768 367 HOH HOH . H 6 HOH A 269 769 144 HOH HOH . H 6 HOH A 270 770 111 HOH HOH . H 6 HOH A 271 771 171 HOH HOH . H 6 HOH A 272 772 284 HOH HOH . H 6 HOH A 273 773 244 HOH HOH . H 6 HOH A 274 774 14 HOH HOH . H 6 HOH A 275 775 252 HOH HOH . H 6 HOH A 276 776 208 HOH HOH . H 6 HOH A 277 777 286 HOH HOH . H 6 HOH A 278 778 507 HOH HOH . H 6 HOH A 279 779 297 HOH HOH . H 6 HOH A 280 780 387 HOH HOH . H 6 HOH A 281 781 465 HOH HOH . H 6 HOH A 282 782 158 HOH HOH . H 6 HOH A 283 783 114 HOH HOH . H 6 HOH A 284 784 285 HOH HOH . H 6 HOH A 285 785 210 HOH HOH . H 6 HOH A 286 786 450 HOH HOH . H 6 HOH A 287 787 75 HOH HOH . H 6 HOH A 288 788 8 HOH HOH . H 6 HOH A 289 789 95 HOH HOH . H 6 HOH A 290 790 61 HOH HOH . H 6 HOH A 291 791 354 HOH HOH . H 6 HOH A 292 792 217 HOH HOH . H 6 HOH A 293 793 491 HOH HOH . H 6 HOH A 294 794 235 HOH HOH . H 6 HOH A 295 795 425 HOH HOH . H 6 HOH A 296 796 322 HOH HOH . H 6 HOH A 297 797 79 HOH HOH . H 6 HOH A 298 798 177 HOH HOH . H 6 HOH A 299 799 258 HOH HOH . H 6 HOH A 300 800 126 HOH HOH . H 6 HOH A 301 801 326 HOH HOH . H 6 HOH A 302 802 248 HOH HOH . H 6 HOH A 303 803 153 HOH HOH . H 6 HOH A 304 804 81 HOH HOH . H 6 HOH A 305 805 223 HOH HOH . H 6 HOH A 306 806 58 HOH HOH . H 6 HOH A 307 807 184 HOH HOH . H 6 HOH A 308 808 160 HOH HOH . H 6 HOH A 309 809 309 HOH HOH . H 6 HOH A 310 810 183 HOH HOH . H 6 HOH A 311 811 157 HOH HOH . H 6 HOH A 312 812 122 HOH HOH . H 6 HOH A 313 813 169 HOH HOH . H 6 HOH A 314 814 38 HOH HOH . H 6 HOH A 315 815 386 HOH HOH . H 6 HOH A 316 816 60 HOH HOH . H 6 HOH A 317 817 216 HOH HOH . H 6 HOH A 318 818 181 HOH HOH . H 6 HOH A 319 819 212 HOH HOH . H 6 HOH A 320 820 400 HOH HOH . H 6 HOH A 321 821 290 HOH HOH . H 6 HOH A 322 822 239 HOH HOH . H 6 HOH A 323 823 388 HOH HOH . H 6 HOH A 324 824 494 HOH HOH . H 6 HOH A 325 825 451 HOH HOH . H 6 HOH A 326 826 460 HOH HOH . H 6 HOH A 327 827 201 HOH HOH . H 6 HOH A 328 828 404 HOH HOH . H 6 HOH A 329 829 211 HOH HOH . H 6 HOH A 330 830 104 HOH HOH . H 6 HOH A 331 831 98 HOH HOH . H 6 HOH A 332 832 323 HOH HOH . H 6 HOH A 333 833 186 HOH HOH . H 6 HOH A 334 834 222 HOH HOH . H 6 HOH A 335 835 350 HOH HOH . H 6 HOH A 336 836 282 HOH HOH . H 6 HOH A 337 837 185 HOH HOH . H 6 HOH A 338 838 431 HOH HOH . H 6 HOH A 339 839 340 HOH HOH . H 6 HOH A 340 840 468 HOH HOH . H 6 HOH A 341 841 237 HOH HOH . H 6 HOH A 342 842 476 HOH HOH . H 6 HOH A 343 843 467 HOH HOH . H 6 HOH A 344 844 384 HOH HOH . H 6 HOH A 345 845 325 HOH HOH . H 6 HOH A 346 846 452 HOH HOH . H 6 HOH A 347 847 393 HOH HOH . H 6 HOH A 348 848 455 HOH HOH . H 6 HOH A 349 849 421 HOH HOH . H 6 HOH A 350 850 118 HOH HOH . H 6 HOH A 351 851 424 HOH HOH . H 6 HOH A 352 852 505 HOH HOH . H 6 HOH A 353 853 454 HOH HOH . H 6 HOH A 354 854 394 HOH HOH . H 6 HOH A 355 855 335 HOH HOH . H 6 HOH A 356 856 390 HOH HOH . H 6 HOH A 357 857 483 HOH HOH . H 6 HOH A 358 858 406 HOH HOH . H 6 HOH A 359 859 329 HOH HOH . H 6 HOH A 360 860 155 HOH HOH . H 6 HOH A 361 861 364 HOH HOH . H 6 HOH A 362 862 346 HOH HOH . H 6 HOH A 363 863 288 HOH HOH . H 6 HOH A 364 864 509 HOH HOH . H 6 HOH A 365 865 412 HOH HOH . H 6 HOH A 366 866 203 HOH HOH . H 6 HOH A 367 867 336 HOH HOH . H 6 HOH A 368 868 215 HOH HOH . H 6 HOH A 369 869 401 HOH HOH . H 6 HOH A 370 870 391 HOH HOH . H 6 HOH A 371 871 441 HOH HOH . H 6 HOH A 372 872 498 HOH HOH . H 6 HOH A 373 873 145 HOH HOH . H 6 HOH A 374 874 112 HOH HOH . H 6 HOH A 375 875 345 HOH HOH . H 6 HOH A 376 876 398 HOH HOH . H 6 HOH A 377 877 194 HOH HOH . H 6 HOH A 378 878 293 HOH HOH . H 6 HOH A 379 879 461 HOH HOH . H 6 HOH A 380 880 102 HOH HOH . H 6 HOH A 381 881 238 HOH HOH . H 6 HOH A 382 882 470 HOH HOH . H 6 HOH A 383 883 259 HOH HOH . H 6 HOH A 384 884 227 HOH HOH . H 6 HOH A 385 885 338 HOH HOH . H 6 HOH A 386 886 261 HOH HOH . H 6 HOH A 387 887 414 HOH HOH . H 6 HOH A 388 888 197 HOH HOH . H 6 HOH A 389 889 188 HOH HOH . H 6 HOH A 390 890 497 HOH HOH . H 6 HOH A 391 891 429 HOH HOH . H 6 HOH A 392 892 319 HOH HOH . H 6 HOH A 393 893 409 HOH HOH . H 6 HOH A 394 894 339 HOH HOH . H 6 HOH A 395 895 310 HOH HOH . H 6 HOH A 396 896 433 HOH HOH . H 6 HOH A 397 897 416 HOH HOH . H 6 HOH A 398 898 471 HOH HOH . H 6 HOH A 399 899 294 HOH HOH . H 6 HOH A 400 900 317 HOH HOH . H 6 HOH A 401 901 375 HOH HOH . H 6 HOH A 402 902 242 HOH HOH . H 6 HOH A 403 903 96 HOH HOH . H 6 HOH A 404 904 508 HOH HOH . H 6 HOH A 405 905 109 HOH HOH . H 6 HOH A 406 906 39 HOH HOH . H 6 HOH A 407 907 392 HOH HOH . H 6 HOH A 408 908 271 HOH HOH . H 6 HOH A 409 909 420 HOH HOH . H 6 HOH A 410 910 417 HOH HOH . H 6 HOH A 411 911 453 HOH HOH . H 6 HOH A 412 912 402 HOH HOH . H 6 HOH A 413 913 474 HOH HOH . H 6 HOH A 414 914 117 HOH HOH . H 6 HOH A 415 915 399 HOH HOH . H 6 HOH A 416 916 180 HOH HOH . H 6 HOH A 417 917 356 HOH HOH . H 6 HOH A 418 918 296 HOH HOH . H 6 HOH A 419 919 301 HOH HOH . H 6 HOH A 420 920 178 HOH HOH . H 6 HOH A 421 921 307 HOH HOH . H 6 HOH A 422 922 304 HOH HOH . H 6 HOH A 423 923 298 HOH HOH . H 6 HOH A 424 924 365 HOH HOH . H 6 HOH A 425 925 464 HOH HOH . H 6 HOH A 426 926 206 HOH HOH . H 6 HOH A 427 927 422 HOH HOH . H 6 HOH A 428 928 202 HOH HOH . H 6 HOH A 429 929 204 HOH HOH . H 6 HOH A 430 930 100 HOH HOH . H 6 HOH A 431 931 373 HOH HOH . H 6 HOH A 432 932 207 HOH HOH . H 6 HOH A 433 933 234 HOH HOH . H 6 HOH A 434 934 407 HOH HOH . H 6 HOH A 435 935 485 HOH HOH . H 6 HOH A 436 936 358 HOH HOH . H 6 HOH A 437 937 315 HOH HOH . H 6 HOH A 438 938 135 HOH HOH . H 6 HOH A 439 939 380 HOH HOH . H 6 HOH A 440 940 368 HOH HOH . H 6 HOH A 441 941 466 HOH HOH . H 6 HOH A 442 942 351 HOH HOH . H 6 HOH A 443 943 103 HOH HOH . H 6 HOH A 444 944 430 HOH HOH . H 6 HOH A 445 945 226 HOH HOH . H 6 HOH A 446 946 302 HOH HOH . H 6 HOH A 447 947 249 HOH HOH . H 6 HOH A 448 948 316 HOH HOH . H 6 HOH A 449 949 337 HOH HOH . H 6 HOH A 450 950 267 HOH HOH . H 6 HOH A 451 951 147 HOH HOH . H 6 HOH A 452 952 299 HOH HOH . H 6 HOH A 453 953 312 HOH HOH . I 6 HOH B 1 501 482 HOH HOH . I 6 HOH B 2 502 352 HOH HOH . I 6 HOH B 3 503 355 HOH HOH . I 6 HOH B 4 504 487 HOH HOH . I 6 HOH B 5 505 243 HOH HOH . I 6 HOH B 6 506 444 HOH HOH . I 6 HOH B 7 507 240 HOH HOH . I 6 HOH B 8 508 313 HOH HOH . I 6 HOH B 9 509 170 HOH HOH . I 6 HOH B 10 510 418 HOH HOH . I 6 HOH B 11 511 150 HOH HOH . I 6 HOH B 12 512 213 HOH HOH . I 6 HOH B 13 513 331 HOH HOH . I 6 HOH B 14 514 53 HOH HOH . I 6 HOH B 15 515 172 HOH HOH . I 6 HOH B 16 516 273 HOH HOH . I 6 HOH B 17 517 311 HOH HOH . I 6 HOH B 18 518 85 HOH HOH . I 6 HOH B 19 519 379 HOH HOH . I 6 HOH B 20 520 395 HOH HOH . I 6 HOH B 21 521 260 HOH HOH . I 6 HOH B 22 522 378 HOH HOH . I 6 HOH B 23 523 318 HOH HOH . I 6 HOH B 24 524 228 HOH HOH . I 6 HOH B 25 525 489 HOH HOH . I 6 HOH B 26 526 262 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 4 14.177 30.969 5.872 1 15.51 ? PB GDP 403 A 1 HETATM 2 O O1B GDP . . . E 4 13.071 31.78 5.179 1 17.23 ? O1B GDP 403 A 1 HETATM 3 O O2B GDP . . . E 4 14.38 29.626 5.193 1 15.63 ? O2B GDP 403 A 1 HETATM 4 O O3B GDP . . . E 4 15.416 31.794 6.05 1 16.01 ? O3B GDP 403 A 1 HETATM 5 O O3A GDP . . . E 4 13.639 30.577 7.316 1 13.84 ? O3A GDP 403 A 1 HETATM 6 P PA GDP . . . E 4 12.509 31.182 8.298 1 16.49 ? PA GDP 403 A 1 HETATM 7 O O1A GDP . . . E 4 12.753 32.613 8.64 1 15.48 ? O1A GDP 403 A 1 HETATM 8 O O2A GDP . . . E 4 12.366 30.265 9.447 1 14.63 ? O2A GDP 403 A 1 HETATM 9 O O5' GDP . . . E 4 11.19 31.209 7.416 1 14.37 ? O5' GDP 403 A 1 HETATM 10 C C5' GDP . . . E 4 10.794 30.012 6.733 1 15.21 ? C5' GDP 403 A 1 HETATM 11 C C4' GDP . . . E 4 9.586 29.386 7.402 1 15.41 ? C4' GDP 403 A 1 HETATM 12 O O4' GDP . . . E 4 8.994 28.437 6.484 1 14.96 ? O4' GDP 403 A 1 HETATM 13 C C3' GDP . . . E 4 9.815 28.591 8.684 1 14.47 ? C3' GDP 403 A 1 HETATM 14 O O3' GDP . . . E 4 9.97 29.407 9.865 1 17.38 ? O3' GDP 403 A 1 HETATM 15 C C2' GDP . . . E 4 8.61 27.688 8.67 1 16.47 ? C2' GDP 403 A 1 HETATM 16 O O2' GDP . . . E 4 7.416 28.405 9.063 1 17.68 ? O2' GDP 403 A 1 HETATM 17 C C1' GDP . . . E 4 8.526 27.331 7.175 1 15.35 ? C1' GDP 403 A 1 HETATM 18 N N9 GDP . . . E 4 9.465 26.218 6.886 1 15.25 ? N9 GDP 403 A 1 HETATM 19 C C8 GDP . . . E 4 10.594 26.28 6.134 1 14.77 ? C8 GDP 403 A 1 HETATM 20 N N7 GDP . . . E 4 11.206 25.093 6.171 1 14.14 ? N7 GDP 403 A 1 HETATM 21 C C5 GDP . . . E 4 10.481 24.275 6.952 1 14.12 ? C5 GDP 403 A 1 HETATM 22 C C6 GDP . . . E 4 10.584 22.906 7.388 1 17.41 ? C6 GDP 403 A 1 HETATM 23 O O6 GDP . . . E 4 11.525 22.169 7.041 1 15.14 ? O6 GDP 403 A 1 HETATM 24 N N1 GDP . . . E 4 9.655 22.459 8.212 1 14.89 ? N1 GDP 403 A 1 HETATM 25 C C2 GDP . . . E 4 8.591 23.196 8.625 1 14.12 ? C2 GDP 403 A 1 HETATM 26 N N2 GDP . . . E 4 7.698 22.608 9.442 1 14.87 ? N2 GDP 403 A 1 HETATM 27 N N3 GDP . . . E 4 8.416 24.458 8.217 1 14.09 ? N3 GDP 403 A 1 HETATM 28 C C4 GDP . . . E 4 9.333 25.039 7.417 1 14.54 ? C4 GDP 403 A 1 HETATM 29 H H4' GDP . . . E 4 8.862 30.184 7.617 1 18.49 ? H4' GDP 403 A 1 HETATM 30 H H3' GDP . . . E 4 10.711 27.971 8.549 1 17.37 ? H3' GDP 403 A 1 HETATM 31 H HO3' GDP . . . E 4 10.133 28.838 10.63 1 20.86 ? HO3' GDP 403 A 1 HETATM 32 H H2' GDP . . . E 4 8.781 26.791 9.28 1 19.77 ? H2' GDP 403 A 1 HETATM 33 H HO2' GDP . . . E 4 7.496 28.682 9.986 1 21.21 ? HO2' GDP 403 A 1 HETATM 34 H H1' GDP . . . E 4 7.494 27.08 6.893 1 18.42 ? H1' GDP 403 A 1 HETATM 35 H H8 GDP . . . E 4 10.937 27.147 5.583 1 17.72 ? H8 GDP 403 A 1 HETATM 36 H HN1 GDP . . . E 4 9.708 21.466 8.515 1 17.87 ? HN1 GDP 403 A 1 HETATM 37 H HN21 GDP . . . E 4 6.9 23.13 9.776 1 17.84 ? HN21 GDP 403 A 1 HETATM 38 H HN22 GDP . . . E 4 7.82 21.643 9.713 1 17.84 ? HN22 GDP 403 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #