data_5KY5 # _model_server_result.job_id n9r2KG5tKyZqTl5urQRqpg _model_server_result.datetime_utc '2024-11-23 01:21:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ky5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5KY5 # _exptl.entry_id 5KY5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KY5 _cell.length_a 52.08 _cell.length_b 67.03 _cell.length_c 111.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KY5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 43 1_555 A SG CYS 16 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 A SG CYS 102 A CYS 131 1_555 A SG CYS 116 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 A SG CYS 225 A CYS 254 1_555 A SG CYS 259 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf4 A SG CYS 243 A CYS 272 1_555 A SG CYS 330 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 B SG CYS 5 B CYS 5 1_555 B SG CYS 16 B CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 B SG CYS 10 B CYS 10 1_555 B SG CYS 25 B CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 B SG CYS 27 B CYS 27 1_555 B SG CYS 36 B CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 A ND2 ASN 38 A ASN 67 1_555 C C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 A ND2 ASN 136 A ASN 165 1_555 D C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 5KY5 _atom_sites.fract_transf_matrix[1][1] 0.019201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 401 401 NAG NAG . D 3 NAG A 1 402 402 NAG NAG . E 4 GDP A 1 403 1 GDP GDP . F 5 GOL A 1 404 1 GOL GOL . G 6 HOH A 1 501 423 HOH HOH . G 6 HOH A 2 502 299 HOH HOH . G 6 HOH A 3 503 424 HOH HOH . G 6 HOH A 4 504 362 HOH HOH . G 6 HOH A 5 505 306 HOH HOH . G 6 HOH A 6 506 385 HOH HOH . G 6 HOH A 7 507 134 HOH HOH . G 6 HOH A 8 508 318 HOH HOH . G 6 HOH A 9 509 430 HOH HOH . G 6 HOH A 10 510 278 HOH HOH . G 6 HOH A 11 511 357 HOH HOH . G 6 HOH A 12 512 290 HOH HOH . G 6 HOH A 13 513 397 HOH HOH . G 6 HOH A 14 514 143 HOH HOH . G 6 HOH A 15 515 83 HOH HOH . G 6 HOH A 16 516 162 HOH HOH . G 6 HOH A 17 517 147 HOH HOH . G 6 HOH A 18 518 241 HOH HOH . G 6 HOH A 19 519 76 HOH HOH . G 6 HOH A 20 520 156 HOH HOH . G 6 HOH A 21 521 110 HOH HOH . G 6 HOH A 22 522 167 HOH HOH . G 6 HOH A 23 523 370 HOH HOH . G 6 HOH A 24 524 252 HOH HOH . G 6 HOH A 25 525 28 HOH HOH . G 6 HOH A 26 526 368 HOH HOH . G 6 HOH A 27 527 250 HOH HOH . G 6 HOH A 28 528 47 HOH HOH . G 6 HOH A 29 529 415 HOH HOH . G 6 HOH A 30 530 169 HOH HOH . G 6 HOH A 31 531 219 HOH HOH . G 6 HOH A 32 532 279 HOH HOH . G 6 HOH A 33 533 70 HOH HOH . G 6 HOH A 34 534 216 HOH HOH . G 6 HOH A 35 535 248 HOH HOH . G 6 HOH A 36 536 170 HOH HOH . G 6 HOH A 37 537 155 HOH HOH . G 6 HOH A 38 538 139 HOH HOH . G 6 HOH A 39 539 144 HOH HOH . G 6 HOH A 40 540 57 HOH HOH . G 6 HOH A 41 541 180 HOH HOH . G 6 HOH A 42 542 417 HOH HOH . G 6 HOH A 43 543 20 HOH HOH . G 6 HOH A 44 544 176 HOH HOH . G 6 HOH A 45 545 398 HOH HOH . G 6 HOH A 46 546 378 HOH HOH . G 6 HOH A 47 547 61 HOH HOH . G 6 HOH A 48 548 232 HOH HOH . G 6 HOH A 49 549 15 HOH HOH . G 6 HOH A 50 550 443 HOH HOH . G 6 HOH A 51 551 217 HOH HOH . G 6 HOH A 52 552 161 HOH HOH . G 6 HOH A 53 553 14 HOH HOH . G 6 HOH A 54 554 227 HOH HOH . G 6 HOH A 55 555 23 HOH HOH . G 6 HOH A 56 556 7 HOH HOH . G 6 HOH A 57 557 112 HOH HOH . G 6 HOH A 58 558 358 HOH HOH . G 6 HOH A 59 559 19 HOH HOH . G 6 HOH A 60 560 350 HOH HOH . G 6 HOH A 61 561 35 HOH HOH . G 6 HOH A 62 562 111 HOH HOH . G 6 HOH A 63 563 373 HOH HOH . G 6 HOH A 64 564 427 HOH HOH . G 6 HOH A 65 565 238 HOH HOH . G 6 HOH A 66 566 127 HOH HOH . G 6 HOH A 67 567 207 HOH HOH . G 6 HOH A 68 568 75 HOH HOH . G 6 HOH A 69 569 141 HOH HOH . G 6 HOH A 70 570 164 HOH HOH . G 6 HOH A 71 571 4 HOH HOH . G 6 HOH A 72 572 102 HOH HOH . G 6 HOH A 73 573 41 HOH HOH . G 6 HOH A 74 574 99 HOH HOH . G 6 HOH A 75 575 86 HOH HOH . G 6 HOH A 76 576 312 HOH HOH . G 6 HOH A 77 577 234 HOH HOH . G 6 HOH A 78 578 72 HOH HOH . G 6 HOH A 79 579 9 HOH HOH . G 6 HOH A 80 580 281 HOH HOH . G 6 HOH A 81 581 25 HOH HOH . G 6 HOH A 82 582 117 HOH HOH . G 6 HOH A 83 583 88 HOH HOH . G 6 HOH A 84 584 43 HOH HOH . G 6 HOH A 85 585 393 HOH HOH . G 6 HOH A 86 586 345 HOH HOH . G 6 HOH A 87 587 226 HOH HOH . G 6 HOH A 88 588 44 HOH HOH . G 6 HOH A 89 589 260 HOH HOH . G 6 HOH A 90 590 298 HOH HOH . G 6 HOH A 91 591 192 HOH HOH . G 6 HOH A 92 592 384 HOH HOH . G 6 HOH A 93 593 16 HOH HOH . G 6 HOH A 94 594 273 HOH HOH . G 6 HOH A 95 595 60 HOH HOH . G 6 HOH A 96 596 179 HOH HOH . G 6 HOH A 97 597 33 HOH HOH . G 6 HOH A 98 598 327 HOH HOH . G 6 HOH A 99 599 283 HOH HOH . G 6 HOH A 100 600 200 HOH HOH . G 6 HOH A 101 601 120 HOH HOH . G 6 HOH A 102 602 104 HOH HOH . G 6 HOH A 103 603 383 HOH HOH . G 6 HOH A 104 604 228 HOH HOH . G 6 HOH A 105 605 229 HOH HOH . G 6 HOH A 106 606 105 HOH HOH . G 6 HOH A 107 607 24 HOH HOH . G 6 HOH A 108 608 103 HOH HOH . G 6 HOH A 109 609 159 HOH HOH . G 6 HOH A 110 610 178 HOH HOH . G 6 HOH A 111 611 202 HOH HOH . G 6 HOH A 112 612 18 HOH HOH . G 6 HOH A 113 613 140 HOH HOH . G 6 HOH A 114 614 67 HOH HOH . G 6 HOH A 115 615 174 HOH HOH . G 6 HOH A 116 616 289 HOH HOH . G 6 HOH A 117 617 133 HOH HOH . G 6 HOH A 118 618 123 HOH HOH . G 6 HOH A 119 619 3 HOH HOH . G 6 HOH A 120 620 329 HOH HOH . G 6 HOH A 121 621 296 HOH HOH . G 6 HOH A 122 622 107 HOH HOH . G 6 HOH A 123 623 246 HOH HOH . G 6 HOH A 124 624 66 HOH HOH . G 6 HOH A 125 625 34 HOH HOH . G 6 HOH A 126 626 21 HOH HOH . G 6 HOH A 127 627 89 HOH HOH . G 6 HOH A 128 628 37 HOH HOH . G 6 HOH A 129 629 113 HOH HOH . G 6 HOH A 130 630 160 HOH HOH . G 6 HOH A 131 631 166 HOH HOH . G 6 HOH A 132 632 1 HOH HOH . G 6 HOH A 133 633 333 HOH HOH . G 6 HOH A 134 634 309 HOH HOH . G 6 HOH A 135 635 173 HOH HOH . G 6 HOH A 136 636 121 HOH HOH . G 6 HOH A 137 637 29 HOH HOH . G 6 HOH A 138 638 152 HOH HOH . G 6 HOH A 139 639 433 HOH HOH . G 6 HOH A 140 640 213 HOH HOH . G 6 HOH A 141 641 245 HOH HOH . G 6 HOH A 142 642 249 HOH HOH . G 6 HOH A 143 643 82 HOH HOH . G 6 HOH A 144 644 335 HOH HOH . G 6 HOH A 145 645 151 HOH HOH . G 6 HOH A 146 646 101 HOH HOH . G 6 HOH A 147 647 183 HOH HOH . G 6 HOH A 148 648 314 HOH HOH . G 6 HOH A 149 649 48 HOH HOH . G 6 HOH A 150 650 138 HOH HOH . G 6 HOH A 151 651 376 HOH HOH . G 6 HOH A 152 652 266 HOH HOH . G 6 HOH A 153 653 53 HOH HOH . G 6 HOH A 154 654 42 HOH HOH . G 6 HOH A 155 655 243 HOH HOH . G 6 HOH A 156 656 254 HOH HOH . G 6 HOH A 157 657 122 HOH HOH . G 6 HOH A 158 658 12 HOH HOH . G 6 HOH A 159 659 30 HOH HOH . G 6 HOH A 160 660 163 HOH HOH . G 6 HOH A 161 661 225 HOH HOH . G 6 HOH A 162 662 239 HOH HOH . G 6 HOH A 163 663 444 HOH HOH . G 6 HOH A 164 664 189 HOH HOH . G 6 HOH A 165 665 203 HOH HOH . G 6 HOH A 166 666 237 HOH HOH . G 6 HOH A 167 667 95 HOH HOH . G 6 HOH A 168 668 79 HOH HOH . G 6 HOH A 169 669 32 HOH HOH . G 6 HOH A 170 670 124 HOH HOH . G 6 HOH A 171 671 330 HOH HOH . G 6 HOH A 172 672 344 HOH HOH . G 6 HOH A 173 673 17 HOH HOH . G 6 HOH A 174 674 355 HOH HOH . G 6 HOH A 175 675 387 HOH HOH . G 6 HOH A 176 676 109 HOH HOH . G 6 HOH A 177 677 119 HOH HOH . G 6 HOH A 178 678 26 HOH HOH . G 6 HOH A 179 679 414 HOH HOH . G 6 HOH A 180 680 328 HOH HOH . G 6 HOH A 181 681 137 HOH HOH . G 6 HOH A 182 682 90 HOH HOH . G 6 HOH A 183 683 233 HOH HOH . G 6 HOH A 184 684 165 HOH HOH . G 6 HOH A 185 685 40 HOH HOH . G 6 HOH A 186 686 106 HOH HOH . G 6 HOH A 187 687 157 HOH HOH . G 6 HOH A 188 688 85 HOH HOH . G 6 HOH A 189 689 80 HOH HOH . G 6 HOH A 190 690 118 HOH HOH . G 6 HOH A 191 691 363 HOH HOH . G 6 HOH A 192 692 341 HOH HOH . G 6 HOH A 193 693 58 HOH HOH . G 6 HOH A 194 694 247 HOH HOH . G 6 HOH A 195 695 240 HOH HOH . G 6 HOH A 196 696 13 HOH HOH . G 6 HOH A 197 697 242 HOH HOH . G 6 HOH A 198 698 177 HOH HOH . G 6 HOH A 199 699 50 HOH HOH . G 6 HOH A 200 700 186 HOH HOH . G 6 HOH A 201 701 2 HOH HOH . G 6 HOH A 202 702 321 HOH HOH . G 6 HOH A 203 703 73 HOH HOH . G 6 HOH A 204 704 10 HOH HOH . G 6 HOH A 205 705 91 HOH HOH . G 6 HOH A 206 706 132 HOH HOH . G 6 HOH A 207 707 8 HOH HOH . G 6 HOH A 208 708 52 HOH HOH . G 6 HOH A 209 709 223 HOH HOH . G 6 HOH A 210 710 64 HOH HOH . G 6 HOH A 211 711 334 HOH HOH . G 6 HOH A 212 712 46 HOH HOH . G 6 HOH A 213 713 96 HOH HOH . G 6 HOH A 214 714 148 HOH HOH . G 6 HOH A 215 715 291 HOH HOH . G 6 HOH A 216 716 172 HOH HOH . G 6 HOH A 217 717 126 HOH HOH . G 6 HOH A 218 718 391 HOH HOH . G 6 HOH A 219 719 365 HOH HOH . G 6 HOH A 220 720 259 HOH HOH . G 6 HOH A 221 721 400 HOH HOH . G 6 HOH A 222 722 136 HOH HOH . G 6 HOH A 223 723 98 HOH HOH . G 6 HOH A 224 724 78 HOH HOH . G 6 HOH A 225 725 116 HOH HOH . G 6 HOH A 226 726 100 HOH HOH . G 6 HOH A 227 727 149 HOH HOH . G 6 HOH A 228 728 115 HOH HOH . G 6 HOH A 229 729 297 HOH HOH . G 6 HOH A 230 730 69 HOH HOH . G 6 HOH A 231 731 146 HOH HOH . G 6 HOH A 232 732 93 HOH HOH . G 6 HOH A 233 733 22 HOH HOH . G 6 HOH A 234 734 420 HOH HOH . G 6 HOH A 235 735 54 HOH HOH . G 6 HOH A 236 736 128 HOH HOH . G 6 HOH A 237 737 367 HOH HOH . G 6 HOH A 238 738 230 HOH HOH . G 6 HOH A 239 739 310 HOH HOH . G 6 HOH A 240 740 175 HOH HOH . G 6 HOH A 241 741 257 HOH HOH . G 6 HOH A 242 742 185 HOH HOH . G 6 HOH A 243 743 301 HOH HOH . G 6 HOH A 244 744 56 HOH HOH . G 6 HOH A 245 745 55 HOH HOH . G 6 HOH A 246 746 253 HOH HOH . G 6 HOH A 247 747 5 HOH HOH . G 6 HOH A 248 748 407 HOH HOH . G 6 HOH A 249 749 27 HOH HOH . G 6 HOH A 250 750 63 HOH HOH . G 6 HOH A 251 751 293 HOH HOH . G 6 HOH A 252 752 212 HOH HOH . G 6 HOH A 253 753 94 HOH HOH . G 6 HOH A 254 754 31 HOH HOH . G 6 HOH A 255 755 271 HOH HOH . G 6 HOH A 256 756 131 HOH HOH . G 6 HOH A 257 757 62 HOH HOH . G 6 HOH A 258 758 231 HOH HOH . G 6 HOH A 259 759 221 HOH HOH . G 6 HOH A 260 760 199 HOH HOH . G 6 HOH A 261 761 258 HOH HOH . G 6 HOH A 262 762 45 HOH HOH . G 6 HOH A 263 763 222 HOH HOH . G 6 HOH A 264 764 145 HOH HOH . G 6 HOH A 265 765 422 HOH HOH . G 6 HOH A 266 766 49 HOH HOH . G 6 HOH A 267 767 108 HOH HOH . G 6 HOH A 268 768 11 HOH HOH . G 6 HOH A 269 769 268 HOH HOH . G 6 HOH A 270 770 211 HOH HOH . G 6 HOH A 271 771 413 HOH HOH . G 6 HOH A 272 772 87 HOH HOH . G 6 HOH A 273 773 342 HOH HOH . G 6 HOH A 274 774 6 HOH HOH . G 6 HOH A 275 775 235 HOH HOH . G 6 HOH A 276 776 39 HOH HOH . G 6 HOH A 277 777 171 HOH HOH . G 6 HOH A 278 778 276 HOH HOH . G 6 HOH A 279 779 193 HOH HOH . G 6 HOH A 280 780 181 HOH HOH . G 6 HOH A 281 781 130 HOH HOH . G 6 HOH A 282 782 92 HOH HOH . G 6 HOH A 283 783 215 HOH HOH . G 6 HOH A 284 784 205 HOH HOH . G 6 HOH A 285 785 302 HOH HOH . G 6 HOH A 286 786 158 HOH HOH . G 6 HOH A 287 787 38 HOH HOH . G 6 HOH A 288 788 409 HOH HOH . G 6 HOH A 289 789 280 HOH HOH . G 6 HOH A 290 790 220 HOH HOH . G 6 HOH A 291 791 434 HOH HOH . G 6 HOH A 292 792 125 HOH HOH . G 6 HOH A 293 793 419 HOH HOH . G 6 HOH A 294 794 65 HOH HOH . G 6 HOH A 295 795 142 HOH HOH . G 6 HOH A 296 796 382 HOH HOH . G 6 HOH A 297 797 374 HOH HOH . G 6 HOH A 298 798 332 HOH HOH . G 6 HOH A 299 799 340 HOH HOH . G 6 HOH A 300 800 81 HOH HOH . G 6 HOH A 301 801 349 HOH HOH . G 6 HOH A 302 802 153 HOH HOH . G 6 HOH A 303 803 114 HOH HOH . G 6 HOH A 304 804 191 HOH HOH . G 6 HOH A 305 805 261 HOH HOH . G 6 HOH A 306 806 272 HOH HOH . G 6 HOH A 307 807 440 HOH HOH . G 6 HOH A 308 808 379 HOH HOH . G 6 HOH A 309 809 311 HOH HOH . G 6 HOH A 310 810 84 HOH HOH . G 6 HOH A 311 811 418 HOH HOH . G 6 HOH A 312 812 426 HOH HOH . G 6 HOH A 313 813 324 HOH HOH . G 6 HOH A 314 814 187 HOH HOH . G 6 HOH A 315 815 218 HOH HOH . G 6 HOH A 316 816 439 HOH HOH . G 6 HOH A 317 817 421 HOH HOH . G 6 HOH A 318 818 431 HOH HOH . G 6 HOH A 319 819 353 HOH HOH . G 6 HOH A 320 820 380 HOH HOH . G 6 HOH A 321 821 360 HOH HOH . G 6 HOH A 322 822 277 HOH HOH . G 6 HOH A 323 823 284 HOH HOH . G 6 HOH A 324 824 366 HOH HOH . G 6 HOH A 325 825 270 HOH HOH . G 6 HOH A 326 826 441 HOH HOH . G 6 HOH A 327 827 307 HOH HOH . G 6 HOH A 328 828 292 HOH HOH . G 6 HOH A 329 829 412 HOH HOH . G 6 HOH A 330 830 304 HOH HOH . G 6 HOH A 331 831 262 HOH HOH . G 6 HOH A 332 832 316 HOH HOH . G 6 HOH A 333 833 447 HOH HOH . G 6 HOH A 334 834 429 HOH HOH . G 6 HOH A 335 835 320 HOH HOH . G 6 HOH A 336 836 435 HOH HOH . G 6 HOH A 337 837 425 HOH HOH . G 6 HOH A 338 838 406 HOH HOH . G 6 HOH A 339 839 288 HOH HOH . G 6 HOH A 340 840 150 HOH HOH . G 6 HOH A 341 841 386 HOH HOH . G 6 HOH A 342 842 351 HOH HOH . G 6 HOH A 343 843 294 HOH HOH . G 6 HOH A 344 844 182 HOH HOH . G 6 HOH A 345 845 394 HOH HOH . G 6 HOH A 346 846 303 HOH HOH . G 6 HOH A 347 847 377 HOH HOH . G 6 HOH A 348 848 416 HOH HOH . G 6 HOH A 349 849 188 HOH HOH . G 6 HOH A 350 850 51 HOH HOH . G 6 HOH A 351 851 282 HOH HOH . G 6 HOH A 352 852 210 HOH HOH . G 6 HOH A 353 853 343 HOH HOH . G 6 HOH A 354 854 348 HOH HOH . G 6 HOH A 355 855 287 HOH HOH . G 6 HOH A 356 856 369 HOH HOH . G 6 HOH A 357 857 97 HOH HOH . G 6 HOH A 358 858 372 HOH HOH . G 6 HOH A 359 859 68 HOH HOH . G 6 HOH A 360 860 448 HOH HOH . G 6 HOH A 361 861 313 HOH HOH . G 6 HOH A 362 862 251 HOH HOH . G 6 HOH A 363 863 209 HOH HOH . G 6 HOH A 364 864 195 HOH HOH . G 6 HOH A 365 865 336 HOH HOH . G 6 HOH A 366 866 438 HOH HOH . G 6 HOH A 367 867 410 HOH HOH . G 6 HOH A 368 868 408 HOH HOH . G 6 HOH A 369 869 264 HOH HOH . G 6 HOH A 370 870 267 HOH HOH . G 6 HOH A 371 871 263 HOH HOH . G 6 HOH A 372 872 364 HOH HOH . G 6 HOH A 373 873 395 HOH HOH . G 6 HOH A 374 874 338 HOH HOH . G 6 HOH A 375 875 388 HOH HOH . G 6 HOH A 376 876 403 HOH HOH . G 6 HOH A 377 877 184 HOH HOH . G 6 HOH A 378 878 255 HOH HOH . G 6 HOH A 379 879 347 HOH HOH . G 6 HOH A 380 880 196 HOH HOH . G 6 HOH A 381 881 346 HOH HOH . G 6 HOH A 382 882 352 HOH HOH . G 6 HOH A 383 883 445 HOH HOH . G 6 HOH A 384 884 436 HOH HOH . G 6 HOH A 385 885 392 HOH HOH . G 6 HOH A 386 886 337 HOH HOH . G 6 HOH A 387 887 323 HOH HOH . G 6 HOH A 388 888 437 HOH HOH . G 6 HOH A 389 889 404 HOH HOH . G 6 HOH A 390 890 274 HOH HOH . G 6 HOH A 391 891 322 HOH HOH . G 6 HOH A 392 892 361 HOH HOH . G 6 HOH A 393 893 194 HOH HOH . G 6 HOH A 394 894 326 HOH HOH . G 6 HOH A 395 895 206 HOH HOH . G 6 HOH A 396 896 390 HOH HOH . G 6 HOH A 397 897 381 HOH HOH . G 6 HOH A 398 898 71 HOH HOH . G 6 HOH A 399 899 208 HOH HOH . G 6 HOH A 400 900 295 HOH HOH . G 6 HOH A 401 901 428 HOH HOH . G 6 HOH A 402 902 389 HOH HOH . G 6 HOH A 403 903 300 HOH HOH . G 6 HOH A 404 904 315 HOH HOH . G 6 HOH A 405 905 401 HOH HOH . G 6 HOH A 406 906 411 HOH HOH . G 6 HOH A 407 907 402 HOH HOH . G 6 HOH A 408 908 168 HOH HOH . G 6 HOH A 409 909 265 HOH HOH . G 6 HOH A 410 910 319 HOH HOH . G 6 HOH A 411 911 256 HOH HOH . G 6 HOH A 412 912 59 HOH HOH . G 6 HOH A 413 913 375 HOH HOH . G 6 HOH A 414 914 204 HOH HOH . G 6 HOH A 415 915 286 HOH HOH . G 6 HOH A 416 916 432 HOH HOH . G 6 HOH A 417 917 269 HOH HOH . G 6 HOH A 418 918 371 HOH HOH . G 6 HOH A 419 919 339 HOH HOH . G 6 HOH A 420 920 442 HOH HOH . G 6 HOH A 421 921 331 HOH HOH . G 6 HOH A 422 922 405 HOH HOH . G 6 HOH A 423 923 285 HOH HOH . G 6 HOH A 424 924 396 HOH HOH . G 6 HOH A 425 925 275 HOH HOH . G 6 HOH A 426 926 446 HOH HOH . H 6 HOH B 1 101 399 HOH HOH . H 6 HOH B 2 102 197 HOH HOH . H 6 HOH B 3 103 36 HOH HOH . H 6 HOH B 4 104 356 HOH HOH . H 6 HOH B 5 105 244 HOH HOH . H 6 HOH B 6 106 129 HOH HOH . H 6 HOH B 7 107 201 HOH HOH . H 6 HOH B 8 108 198 HOH HOH . H 6 HOH B 9 109 74 HOH HOH . H 6 HOH B 10 110 190 HOH HOH . H 6 HOH B 11 111 135 HOH HOH . H 6 HOH B 12 112 224 HOH HOH . H 6 HOH B 13 113 308 HOH HOH . H 6 HOH B 14 114 154 HOH HOH . H 6 HOH B 15 115 214 HOH HOH . H 6 HOH B 16 116 236 HOH HOH . H 6 HOH B 17 117 359 HOH HOH . H 6 HOH B 18 118 354 HOH HOH . H 6 HOH B 19 119 325 HOH HOH . H 6 HOH B 20 120 77 HOH HOH . H 6 HOH B 21 121 317 HOH HOH . H 6 HOH B 22 122 305 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 4 14.265 31.205 6.217 1 18.16 ? PB GDP 403 A 1 HETATM 2 O O1B GDP . . . E 4 13.273 32.104 5.456 1 19.46 ? O1B GDP 403 A 1 HETATM 3 O O2B GDP . . . E 4 14.365 29.855 5.579 1 18.6 ? O2B GDP 403 A 1 HETATM 4 O O3B GDP . . . E 4 15.51 31.974 6.427 1 17.66 ? O3B GDP 403 A 1 HETATM 5 O O3A GDP . . . E 4 13.728 30.775 7.635 1 21.59 ? O3A GDP 403 A 1 HETATM 6 P PA GDP . . . E 4 12.647 31.393 8.628 1 22.37 ? PA GDP 403 A 1 HETATM 7 O O1A GDP . . . E 4 12.867 32.869 9.005 1 19.22 ? O1A GDP 403 A 1 HETATM 8 O O2A GDP . . . E 4 12.457 30.304 9.67 1 17.47 ? O2A GDP 403 A 1 HETATM 9 O O5' GDP . . . E 4 11.276 31.416 7.732 1 22.55 ? O5' GDP 403 A 1 HETATM 10 C C5' GDP . . . E 4 10.855 30.235 7.031 1 22.57 ? C5' GDP 403 A 1 HETATM 11 C C4' GDP . . . E 4 9.627 29.666 7.731 1 23.39 ? C4' GDP 403 A 1 HETATM 12 O O4' GDP . . . E 4 8.969 28.746 6.833 1 19.46 ? O4' GDP 403 A 1 HETATM 13 C C3' GDP . . . E 4 9.878 28.826 8.975 1 21.22 ? C3' GDP 403 A 1 HETATM 14 O O3' GDP . . . E 4 10.006 29.587 10.168 1 23.42 ? O3' GDP 403 A 1 HETATM 15 C C2' GDP . . . E 4 8.649 27.951 8.996 1 21.92 ? C2' GDP 403 A 1 HETATM 16 O O2' GDP . . . E 4 7.519 28.71 9.479 1 21.76 ? O2' GDP 403 A 1 HETATM 17 C C1' GDP . . . E 4 8.49 27.608 7.524 1 20.82 ? C1' GDP 403 A 1 HETATM 18 N N9 GDP . . . E 4 9.42 26.512 7.189 1 19.12 ? N9 GDP 403 A 1 HETATM 19 C C8 GDP . . . E 4 10.529 26.637 6.416 1 22.34 ? C8 GDP 403 A 1 HETATM 20 N N7 GDP . . . E 4 11.196 25.456 6.351 1 17.27 ? N7 GDP 403 A 1 HETATM 21 C C5 GDP . . . E 4 10.501 24.579 7.139 1 19.39 ? C5 GDP 403 A 1 HETATM 22 C C6 GDP . . . E 4 10.585 23.171 7.564 1 25.79 ? C6 GDP 403 A 1 HETATM 23 O O6 GDP . . . E 4 11.491 22.379 7.213 1 23.35 ? O6 GDP 403 A 1 HETATM 24 N N1 GDP . . . E 4 9.637 22.711 8.395 1 24.18 ? N1 GDP 403 A 1 HETATM 25 C C2 GDP . . . E 4 8.597 23.414 8.872 1 24.02 ? C2 GDP 403 A 1 HETATM 26 N N2 GDP . . . E 4 7.701 22.8 9.7 1 21.67 ? N2 GDP 403 A 1 HETATM 27 N N3 GDP . . . E 4 8.434 24.701 8.517 1 21.97 ? N3 GDP 403 A 1 HETATM 28 C C4 GDP . . . E 4 9.339 25.291 7.682 1 18.76 ? C4 GDP 403 A 1 HETATM 29 H H4' GDP . . . E 4 8.948 30.491 7.989 1 28.07 ? H4' GDP 403 A 1 HETATM 30 H H3' GDP . . . E 4 10.767 28.2 8.818 1 25.47 ? H3' GDP 403 A 1 HETATM 31 H HO3' GDP . . . E 4 10.156 28.992 10.915 1 28.1 ? HO3' GDP 403 A 1 HETATM 32 H H2' GDP . . . E 4 8.827 27.044 9.591 1 26.3 ? H2' GDP 403 A 1 HETATM 33 H HO2' GDP . . . E 4 7.672 28.966 10.399 1 26.11 ? HO2' GDP 403 A 1 HETATM 34 H H1' GDP . . . E 4 7.446 27.372 7.275 1 24.98 ? H1' GDP 403 A 1 HETATM 35 H H8 GDP . . . E 4 10.82 27.54 5.894 1 26.8 ? H8 GDP 403 A 1 HETATM 36 H HN1 GDP . . . E 4 9.704 21.714 8.681 1 29.01 ? HN1 GDP 403 A 1 HETATM 37 H HN21 GDP . . . E 4 6.915 23.317 10.067 1 26.01 ? HN21 GDP 403 A 1 HETATM 38 H HN22 GDP . . . E 4 7.826 21.828 9.948 1 26.01 ? HN22 GDP 403 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #