data_5KYA # _model_server_result.job_id bML8Jq_A8HUxr2UGDwOO1g _model_server_result.datetime_utc '2024-10-18 15:29:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kya # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 5KYA # _exptl.entry_id 5KYA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 481.491 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[2-[(6~{R})-2-(3-methylsulfonylphenyl)-6-propan-2-yl-4,6-dihydropyrrolo[3,4-c]pyrazol-5-yl]-4-(trifluoromethyl)pyrimidin-5-yl]methanol' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5KYA _cell.length_a 68.439 _cell.length_b 101.089 _cell.length_c 143.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KYA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C21 H22 F3 N5 O3 S' _chem_comp.formula_weight 481.491 _chem_comp.id 6Y4 _chem_comp.mon_nstd_flag . _chem_comp.name '[2-[(6~{R})-2-(3-methylsulfonylphenyl)-6-propan-2-yl-4,6-dihydropyrrolo[3,4-c]pyrazol-5-yl]-4-(trifluoromethyl)pyrimidin-5-yl]methanol' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 6Y4 sing 1 n n C1 C2 6Y4 sing 2 n n F1 C21 6Y4 sing 3 n n F3 C21 6Y4 sing 4 n n C2 C5 6Y4 doub 5 n y C2 C3 6Y4 sing 6 n y C21 C3 6Y4 sing 7 n n C21 F2 6Y4 sing 8 n n C5 N2 6Y4 sing 9 n y C3 N1 6Y4 doub 10 n y N2 C4 6Y4 doub 11 n y N1 C4 6Y4 sing 12 n y C4 N3 6Y4 sing 13 n n N3 C10 6Y4 sing 14 n n N3 C6 6Y4 sing 15 n n C10 C11 6Y4 sing 16 n n C10 C9 6Y4 sing 17 n n C11 C12 6Y4 sing 18 n n C11 C13 6Y4 sing 19 n n C6 C7 6Y4 sing 20 n n C9 C7 6Y4 sing 21 n y C9 N5 6Y4 doub 22 n y C7 C8 6Y4 doub 23 n y N5 N4 6Y4 sing 24 n y C8 N4 6Y4 sing 25 n y N4 C14 6Y4 sing 26 n n C14 C20 6Y4 doub 27 n y C14 C15 6Y4 sing 28 n y C20 C19 6Y4 sing 29 n y C15 C16 6Y4 doub 30 n y C19 C18 6Y4 doub 31 n y C16 C18 6Y4 sing 32 n y C16 S 6Y4 sing 33 n n C17 S 6Y4 sing 34 n n O3 S 6Y4 doub 35 n n S O2 6Y4 doub 36 n n C8 H1 6Y4 sing 37 n n C5 H2 6Y4 sing 38 n n C6 H3 6Y4 sing 39 n n C6 H4 6Y4 sing 40 n n C1 H5 6Y4 sing 41 n n C1 H6 6Y4 sing 42 n n C13 H7 6Y4 sing 43 n n C13 H8 6Y4 sing 44 n n C13 H9 6Y4 sing 45 n n C15 H10 6Y4 sing 46 n n C12 H11 6Y4 sing 47 n n C12 H12 6Y4 sing 48 n n C12 H13 6Y4 sing 49 n n C11 H14 6Y4 sing 50 n n C10 H15 6Y4 sing 51 n n C17 H16 6Y4 sing 52 n n C17 H17 6Y4 sing 53 n n C17 H18 6Y4 sing 54 n n C20 H19 6Y4 sing 55 n n C19 H20 6Y4 sing 56 n n C18 H21 6Y4 sing 57 n n O1 H22 6Y4 sing 58 n n # _atom_sites.entry_id 5KYA _atom_sites.fract_transf_matrix[1][1] 0.014612 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 6Y4 A 1 501 1 6Y4 413 . F 3 6Y4 E 1 501 1 6Y4 413 . G 4 HOH A 1 601 12 HOH HOH . G 4 HOH A 2 602 10 HOH HOH . G 4 HOH A 3 603 5 HOH HOH . G 4 HOH A 4 604 13 HOH HOH . G 4 HOH A 5 605 8 HOH HOH . G 4 HOH A 6 606 1 HOH HOH . G 4 HOH A 7 607 4 HOH HOH . H 4 HOH B 1 601 14 HOH HOH . H 4 HOH B 2 602 6 HOH HOH . I 4 HOH E 1 601 2 HOH HOH . I 4 HOH E 2 602 11 HOH HOH . I 4 HOH E 3 603 7 HOH HOH . I 4 HOH E 4 604 3 HOH HOH . J 4 HOH F 1 601 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N4 6Y4 . . . E 3 10.996 -41.142 12.036 1 42.71 ? N4 6Y4 501 A 1 HETATM 2 C C8 6Y4 . . . E 3 9.641 -41.185 12.07 1 45.76 ? C8 6Y4 501 A 1 HETATM 3 N N3 6Y4 . . . E 3 9.002 -39.91 15.384 1 50.49 ? N3 6Y4 501 A 1 HETATM 4 C C5 6Y4 . . . E 3 9.487 -39.425 18.897 1 67.76 ? C5 6Y4 501 A 1 HETATM 5 C C4 6Y4 . . . E 3 8.648 -39.879 16.722 1 58.05 ? C4 6Y4 501 A 1 HETATM 6 C C3 6Y4 . . . E 3 7.27 -40.309 18.501 1 72.26 ? C3 6Y4 501 A 1 HETATM 7 C C6 6Y4 . . . E 3 8.187 -40.314 14.207 1 44.16 ? C6 6Y4 501 A 1 HETATM 8 C C7 6Y4 . . . E 3 9.337 -40.665 13.31 1 42.8 ? C7 6Y4 501 A 1 HETATM 9 C C2 6Y4 . . . E 3 8.296 -39.837 19.469 1 66.99 ? C2 6Y4 501 A 1 HETATM 10 C C1 6Y4 . . . E 3 8.106 -39.813 20.991 1 69.33 ? C1 6Y4 501 A 1 HETATM 11 N N2 6Y4 . . . E 3 9.628 -39.477 17.573 1 59.6 ? N2 6Y4 501 A 1 HETATM 12 N N1 6Y4 . . . E 3 7.466 -40.322 17.163 1 62.04 ? N1 6Y4 501 A 1 HETATM 13 C C9 6Y4 . . . E 3 10.595 -40.344 13.898 1 40.44 ? C9 6Y4 501 A 1 HETATM 14 C C14 6Y4 . . . E 3 11.741 -41.502 10.998 1 40.71 ? C14 6Y4 501 A 1 HETATM 15 C C13 6Y4 . . . E 3 9.88 -37.396 14.274 1 43.93 ? C13 6Y4 501 A 1 HETATM 16 O O3 6Y4 . . . E 3 12.002 -44.965 8.027 1 52.17 ? O3 6Y4 501 A 1 HETATM 17 C C15 6Y4 . . . E 3 11.261 -42.355 10.025 1 40.73 ? C15 6Y4 501 A 1 HETATM 18 C C12 6Y4 . . . E 3 11.45 -37.722 16.184 1 53.42 ? C12 6Y4 501 A 1 HETATM 19 C C11 6Y4 . . . E 3 10.916 -38.31 14.908 1 46.13 ? C11 6Y4 501 A 1 HETATM 20 C C10 6Y4 . . . E 3 10.445 -39.729 15.162 1 45.45 ? C10 6Y4 501 A 1 HETATM 21 C C16 6Y4 . . . E 3 12.014 -42.684 8.915 1 43.51 ? C16 6Y4 501 A 1 HETATM 22 C C17 6Y4 . . . E 3 9.783 -43.816 8.05 1 43.58 ? C17 6Y4 501 A 1 HETATM 23 C C21 6Y4 . . . E 3 5.971 -40.786 18.982 1 85.38 ? C21 6Y4 501 A 1 HETATM 24 C C20 6Y4 . . . E 3 13.033 -40.991 10.814 1 37.31 ? C20 6Y4 501 A 1 HETATM 25 C C19 6Y4 . . . E 3 13.798 -41.329 9.72 1 39.73 ? C19 6Y4 501 A 1 HETATM 26 C C18 6Y4 . . . E 3 13.284 -42.173 8.745 1 41.54 ? C18 6Y4 501 A 1 HETATM 27 F F3 6Y4 . . . E 3 5.421 -39.818 19.706 1 84.21 ? F3 6Y4 501 A 1 HETATM 28 F F1 6Y4 . . . E 3 6.261 -41.872 19.7 1 85.82 ? F1 6Y4 501 A 1 HETATM 29 F F2 6Y4 . . . E 3 5.249 -41.041 17.893 1 95.97 ? F2 6Y4 501 A 1 HETATM 30 O O1 6Y4 . . . E 3 8.81 -38.738 21.658 1 68.35 ? O1 6Y4 501 A 1 HETATM 31 N N5 6Y4 . . . E 3 11.638 -40.596 13.134 1 41.43 ? N5 6Y4 501 A 1 HETATM 32 S S 6Y4 . . . E 3 11.405 -43.665 7.826 1 44.78 ? S 6Y4 501 A 1 HETATM 33 O O2 6Y4 . . . E 3 11.765 -43.132 6.551 1 42.74 ? O2 6Y4 501 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #