data_5KYV # _model_server_result.job_id Fj75WuOHwhoG8IlEoJ4IrQ _model_server_result.datetime_utc '2024-10-19 15:32:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5kyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 5KYV # _exptl.entry_id 5KYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5KYV _cell.length_a 93.078 _cell.length_b 93.078 _cell.length_c 293.645 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5KYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 369 n n O11 C1 TLA sing 370 n n O11 H11 TLA sing 371 n n C1 C2 TLA sing 372 n n C2 O2 TLA sing 373 n n C2 C3 TLA sing 374 n n C2 H2 TLA sing 375 n n O2 HA TLA sing 376 n n C3 O3 TLA sing 377 n n C3 C4 TLA sing 378 n n C3 H3 TLA sing 379 n n O3 HB TLA sing 380 n n C4 O4 TLA doub 381 n n C4 O41 TLA sing 382 n n O41 H41 TLA sing 383 n n # _atom_sites.entry_id 5KYV _atom_sites.fract_transf_matrix[1][1] 0.010744 _atom_sites.fract_transf_matrix[1][2] 0.006203 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SLU A 1 601 998 SLU SLU . D 3 TLA A 1 602 1 TLA TLA . E 2 SLU B 1 601 999 SLU SLU . F 4 HOH A 1 701 14 HOH HOH . F 4 HOH A 2 702 62 HOH HOH . F 4 HOH A 3 703 6 HOH HOH . F 4 HOH A 4 704 47 HOH HOH . F 4 HOH A 5 705 49 HOH HOH . F 4 HOH A 6 706 8 HOH HOH . F 4 HOH A 7 707 48 HOH HOH . F 4 HOH A 8 708 4 HOH HOH . F 4 HOH A 9 709 15 HOH HOH . F 4 HOH A 10 710 43 HOH HOH . F 4 HOH A 11 711 5 HOH HOH . F 4 HOH A 12 712 7 HOH HOH . F 4 HOH A 13 713 42 HOH HOH . F 4 HOH A 14 714 45 HOH HOH . F 4 HOH A 15 715 50 HOH HOH . F 4 HOH A 16 716 16 HOH HOH . F 4 HOH A 17 717 69 HOH HOH . F 4 HOH A 18 718 30 HOH HOH . F 4 HOH A 19 719 26 HOH HOH . F 4 HOH A 20 720 12 HOH HOH . F 4 HOH A 21 721 2 HOH HOH . F 4 HOH A 22 722 10 HOH HOH . F 4 HOH A 23 723 25 HOH HOH . F 4 HOH A 24 724 27 HOH HOH . F 4 HOH A 25 725 31 HOH HOH . F 4 HOH A 26 726 1 HOH HOH . F 4 HOH A 27 727 59 HOH HOH . F 4 HOH A 28 728 24 HOH HOH . F 4 HOH A 29 729 29 HOH HOH . F 4 HOH A 30 730 60 HOH HOH . F 4 HOH A 31 731 9 HOH HOH . F 4 HOH A 32 732 46 HOH HOH . F 4 HOH A 33 733 61 HOH HOH . F 4 HOH A 34 734 41 HOH HOH . F 4 HOH A 35 735 44 HOH HOH . F 4 HOH A 36 736 13 HOH HOH . F 4 HOH A 37 737 63 HOH HOH . F 4 HOH A 38 738 58 HOH HOH . F 4 HOH A 39 739 3 HOH HOH . G 4 HOH B 1 701 57 HOH HOH . G 4 HOH B 2 702 23 HOH HOH . G 4 HOH B 3 703 28 HOH HOH . G 4 HOH B 4 704 33 HOH HOH . G 4 HOH B 5 705 68 HOH HOH . G 4 HOH B 6 706 40 HOH HOH . G 4 HOH B 7 707 53 HOH HOH . G 4 HOH B 8 708 38 HOH HOH . G 4 HOH B 9 709 70 HOH HOH . G 4 HOH B 10 710 17 HOH HOH . G 4 HOH B 11 711 52 HOH HOH . G 4 HOH B 12 712 19 HOH HOH . G 4 HOH B 13 713 73 HOH HOH . G 4 HOH B 14 714 20 HOH HOH . G 4 HOH B 15 715 51 HOH HOH . G 4 HOH B 16 716 37 HOH HOH . G 4 HOH B 17 717 55 HOH HOH . G 4 HOH B 18 718 18 HOH HOH . G 4 HOH B 19 719 32 HOH HOH . G 4 HOH B 20 720 22 HOH HOH . G 4 HOH B 21 721 36 HOH HOH . G 4 HOH B 22 722 72 HOH HOH . G 4 HOH B 23 723 54 HOH HOH . G 4 HOH B 24 724 21 HOH HOH . G 4 HOH B 25 725 56 HOH HOH . G 4 HOH B 26 726 35 HOH HOH . G 4 HOH B 27 727 11 HOH HOH . G 4 HOH B 28 728 39 HOH HOH . G 4 HOH B 29 729 74 HOH HOH . G 4 HOH B 30 730 71 HOH HOH . G 4 HOH B 31 731 67 HOH HOH . G 4 HOH B 32 732 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . D 3 55.334 -31.582 -16.911 1 51.15 ? O1 TLA 602 A 1 HETATM 2 O O11 TLA . . . D 3 57.064 -32.1 -15.553 1 63.52 ? O11 TLA 602 A 1 HETATM 3 C C1 TLA . . . D 3 56.239 -32.35 -16.479 1 64.67 ? C1 TLA 602 A 1 HETATM 4 C C2 TLA . . . D 3 56.365 -33.688 -17.114 1 55.55 ? C2 TLA 602 A 1 HETATM 5 O O2 TLA . . . D 3 56.148 -34.618 -16.055 1 62.46 ? O2 TLA 602 A 1 HETATM 6 C C3 TLA . . . D 3 57.751 -33.769 -17.794 1 63.19 ? C3 TLA 602 A 1 HETATM 7 O O3 TLA . . . D 3 58.588 -32.62 -17.473 1 64.66 ? O3 TLA 602 A 1 HETATM 8 C C4 TLA . . . D 3 58.503 -35.064 -17.549 1 65.93 ? C4 TLA 602 A 1 HETATM 9 O O4 TLA . . . D 3 59.672 -35.119 -18 1 63.23 ? O4 TLA 602 A 1 HETATM 10 O O41 TLA . . . D 3 57.972 -36.028 -16.927 1 61.07 ? O41 TLA 602 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 10 #