data_5L1N
#
_model_server_result.job_id            MjCPAoz9o78ABPxap2QsFQ 
_model_server_result.datetime_utc      '2024-10-19 13:21:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5l1n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    5L1N 
#
_exptl.entry_id    5L1N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5L1N 
_cell.length_a            191.965 
_cell.length_b            191.965 
_cell.length_c            74.866 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5L1N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            ND2 
_struct_conn.ptnr1_label_comp_id            ASN 
_struct_conn.ptnr1_label_seq_id             386 
_struct_conn.ptnr1_auth_asym_id             B 
_struct_conn.ptnr1_auth_comp_id             ASN 
_struct_conn.ptnr1_auth_seq_id              386 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            CE1 
_struct_conn.ptnr2_label_comp_id            PHE 
_struct_conn.ptnr2_label_seq_id             445 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             PHE 
_struct_conn.ptnr2_auth_seq_id              445 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.467 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 169 n n 
PA O2A FAD sing 170 n n 
PA O5B FAD sing 171 n n 
PA O3P FAD sing 172 n n 
O2A HOA2 FAD sing 173 n n 
O5B C5B FAD sing 174 n n 
C5B C4B FAD sing 175 n n 
C5B H51A FAD sing 176 n n 
C5B H52A FAD sing 177 n n 
C4B O4B FAD sing 178 n n 
C4B C3B FAD sing 179 n n 
C4B H4B FAD sing 180 n n 
O4B C1B FAD sing 181 n n 
C3B O3B FAD sing 182 n n 
C3B C2B FAD sing 183 n n 
C3B H3B FAD sing 184 n n 
O3B HO3A FAD sing 185 n n 
C2B O2B FAD sing 186 n n 
C2B C1B FAD sing 187 n n 
C2B H2B FAD sing 188 n n 
O2B HO2A FAD sing 189 n n 
C1B N9A FAD sing 190 n n 
C1B H1B FAD sing 191 n n 
N9A C8A FAD sing 192 n y 
N9A C4A FAD sing 193 n y 
C8A N7A FAD doub 194 n y 
C8A H8A FAD sing 195 n n 
N7A C5A FAD sing 196 n y 
C5A C6A FAD sing 197 n y 
C5A C4A FAD doub 198 n y 
C6A N6A FAD sing 199 n n 
C6A N1A FAD doub 200 n y 
N6A H61A FAD sing 201 n n 
N6A H62A FAD sing 202 n n 
N1A C2A FAD sing 203 n y 
C2A N3A FAD doub 204 n y 
C2A H2A FAD sing 205 n n 
N3A C4A FAD sing 206 n y 
N1 C2 FAD sing 207 n n 
N1 C10 FAD doub 208 n n 
C2 O2 FAD doub 209 n n 
C2 N3 FAD sing 210 n n 
N3 C4 FAD sing 211 n n 
N3 HN3 FAD sing 212 n n 
C4 O4 FAD doub 213 n n 
C4 C4X FAD sing 214 n n 
C4X N5 FAD doub 215 n n 
C4X C10 FAD sing 216 n n 
N5 C5X FAD sing 217 n n 
C5X C6 FAD doub 218 n y 
C5X C9A FAD sing 219 n y 
C6 C7 FAD sing 220 n y 
C6 H6 FAD sing 221 n n 
C7 C7M FAD sing 222 n n 
C7 C8 FAD doub 223 n y 
C7M HM71 FAD sing 224 n n 
C7M HM72 FAD sing 225 n n 
C7M HM73 FAD sing 226 n n 
C8 C8M FAD sing 227 n n 
C8 C9 FAD sing 228 n y 
C8M HM81 FAD sing 229 n n 
C8M HM82 FAD sing 230 n n 
C8M HM83 FAD sing 231 n n 
C9 C9A FAD doub 232 n y 
C9 H9 FAD sing 233 n n 
C9A N10 FAD sing 234 n n 
N10 C10 FAD sing 235 n n 
N10 C1' FAD sing 236 n n 
C1' C2' FAD sing 237 n n 
C1' "H1'1" FAD sing 238 n n 
C1' "H1'2" FAD sing 239 n n 
C2' O2' FAD sing 240 n n 
C2' C3' FAD sing 241 n n 
C2' H2' FAD sing 242 n n 
O2' HO2' FAD sing 243 n n 
C3' O3' FAD sing 244 n n 
C3' C4' FAD sing 245 n n 
C3' H3' FAD sing 246 n n 
O3' HO3' FAD sing 247 n n 
C4' O4' FAD sing 248 n n 
C4' C5' FAD sing 249 n n 
C4' H4' FAD sing 250 n n 
O4' HO4' FAD sing 251 n n 
C5' O5' FAD sing 252 n n 
C5' "H5'1" FAD sing 253 n n 
C5' "H5'2" FAD sing 254 n n 
O5' P FAD sing 255 n n 
P O1P FAD doub 256 n n 
P O2P FAD sing 257 n n 
P O3P FAD sing 258 n n 
O2P HOP2 FAD sing 259 n n 
#
_atom_sites.entry_id                     5L1N 
_atom_sites.fract_transf_matrix[1][1]    0.005209 
_atom_sites.fract_transf_matrix[1][2]    0.003008 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006015 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013357 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 901 901 FAD FAD . 
D 3 COA A 1 902 902 COA COA . 
E 2 FAD B 1 901 901 FAD FAD . 
F 3 COA B 1 902 902 COA COA . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 37.219 -10.797 18.508 1 167.19 ? PA FAD 901 A 1 
HETATM 2 O O1A FAD . . . C 2 37.938 -11.985 17.899 1 144.68 -1 O1A FAD 901 A 1 
HETATM 3 O O2A FAD . . . C 2 37.623 -9.382 18.187 1 162.08 ? O2A FAD 901 A 1 
HETATM 4 O O5B FAD . . . C 2 37.31 -10.884 20.102 1 182.83 ? O5B FAD 901 A 1 
HETATM 5 C C5B FAD . . . C 2 36.759 -11.995 20.796 1 208.82 ? C5B FAD 901 A 1 
HETATM 6 C C4B FAD . . . C 2 37.43 -12.092 22.159 1 223.94 ? C4B FAD 901 A 1 
HETATM 7 O O4B FAD . . . C 2 36.853 -13.162 22.919 1 233.12 ? O4B FAD 901 A 1 
HETATM 8 C C3B FAD . . . C 2 38.933 -12.362 22.05 1 228.72 ? C3B FAD 901 A 1 
HETATM 9 O O3B FAD . . . C 2 39.704 -11.258 22.546 1 223.15 ? O3B FAD 901 A 1 
HETATM 10 C C2B FAD . . . C 2 39.163 -13.627 22.857 1 232.54 ? C2B FAD 901 A 1 
HETATM 11 O O2B FAD . . . C 2 40.341 -13.57 23.671 1 232.81 ? O2B FAD 901 A 1 
HETATM 12 C C1B FAD . . . C 2 37.894 -13.756 23.695 1 234.47 ? C1B FAD 901 A 1 
HETATM 13 N N9A FAD . . . C 2 37.593 -15.151 24.082 1 237.08 ? N9A FAD 901 A 1 
HETATM 14 C C8A FAD . . . C 2 37.571 -16.229 23.278 1 241.18 ? C8A FAD 901 A 1 
HETATM 15 N N7A FAD . . . C 2 37.267 -17.343 23.986 1 242.64 ? N7A FAD 901 A 1 
HETATM 16 C C5A FAD . . . C 2 37.087 -16.98 25.266 1 242.82 ? C5A FAD 901 A 1 
HETATM 17 C C6A FAD . . . C 2 36.745 -17.667 26.538 1 242.39 ? C6A FAD 901 A 1 
HETATM 18 N N6A FAD . . . C 2 36.524 -19.004 26.579 1 241.28 ? N6A FAD 901 A 1 
HETATM 19 N N1A FAD . . . C 2 36.658 -16.912 27.66 1 243.3 ? N1A FAD 901 A 1 
HETATM 20 C C2A FAD . . . C 2 36.873 -15.582 27.648 1 245.51 ? C2A FAD 901 A 1 
HETATM 21 N N3A FAD . . . C 2 37.186 -14.895 26.527 1 244.42 ? N3A FAD 901 A 1 
HETATM 22 C C4A FAD . . . C 2 37.305 -15.528 25.328 1 243.04 ? C4A FAD 901 A 1 
HETATM 23 N N1 FAD . . . C 2 37.429 -6.332 9.953 1 206.55 ? N1 FAD 901 A 1 
HETATM 24 C C2 FAD . . . C 2 37.204 -5.306 9.083 1 211.6 ? C2 FAD 901 A 1 
HETATM 25 O O2 FAD . . . C 2 36.052 -4.821 9.029 1 221.53 ? O2 FAD 901 A 1 
HETATM 26 N N3 FAD . . . C 2 38.167 -4.796 8.278 1 206.75 ? N3 FAD 901 A 1 
HETATM 27 C C4 FAD . . . C 2 39.425 -5.269 8.281 1 196.36 ? C4 FAD 901 A 1 
HETATM 28 O O4 FAD . . . C 2 40.311 -4.787 7.531 1 182.47 ? O4 FAD 901 A 1 
HETATM 29 C C4X FAD . . . C 2 39.738 -6.386 9.206 1 195.84 ? C4X FAD 901 A 1 
HETATM 30 N N5 FAD . . . C 2 40.977 -6.892 9.267 1 196.86 ? N5 FAD 901 A 1 
HETATM 31 C C5X FAD . . . C 2 41.28 -7.911 10.091 1 203.39 ? C5X FAD 901 A 1 
HETATM 32 C C6 FAD . . . C 2 42.59 -8.376 10.063 1 207.58 ? C6 FAD 901 A 1 
HETATM 33 C C7 FAD . . . C 2 42.982 -9.419 10.892 1 208.12 ? C7 FAD 901 A 1 
HETATM 34 C C7M FAD . . . C 2 44.411 -9.897 10.84 1 211.93 ? C7M FAD 901 A 1 
HETATM 35 C C8 FAD . . . C 2 41.978 -10.037 11.812 1 204.79 ? C8 FAD 901 A 1 
HETATM 36 C C8M FAD . . . C 2 42.371 -11.17 12.725 1 204.37 ? C8M FAD 901 A 1 
HETATM 37 C C9 FAD . . . C 2 40.66 -9.569 11.836 1 205.71 ? C9 FAD 901 A 1 
HETATM 38 C C9A FAD . . . C 2 40.247 -8.512 11.01 1 204.05 ? C9A FAD 901 A 1 
HETATM 39 N N10 FAD . . . C 2 38.909 -7.988 10.986 1 204.21 ? N10 FAD 901 A 1 
HETATM 40 C C10 FAD . . . C 2 38.644 -6.924 10.069 1 201.07 ? C10 FAD 901 A 1 
HETATM 41 C C1' FAD . . . C 2 37.808 -8.515 11.841 1 206.65 ? C1' FAD 901 A 1 
HETATM 42 C C2' FAD . . . C 2 37.612 -7.804 13.201 1 204.79 ? C2' FAD 901 A 1 
HETATM 43 O O2' FAD . . . C 2 38.859 -7.697 13.897 1 203.53 ? O2' FAD 901 A 1 
HETATM 44 C C3' FAD . . . C 2 36.578 -8.531 14.081 1 200.54 ? C3' FAD 901 A 1 
HETATM 45 O O3' FAD . . . C 2 35.372 -8.637 13.318 1 208.17 ? O3' FAD 901 A 1 
HETATM 46 C C4' FAD . . . C 2 36.183 -7.928 15.443 1 189.85 ? C4' FAD 901 A 1 
HETATM 47 O O4' FAD . . . C 2 37.333 -7.807 16.286 1 187.65 ? O4' FAD 901 A 1 
HETATM 48 C C5' FAD . . . C 2 35.117 -8.794 16.138 1 186.81 ? C5' FAD 901 A 1 
HETATM 49 O O5' FAD . . . C 2 35.054 -8.652 17.563 1 176.15 ? O5' FAD 901 A 1 
HETATM 50 P P FAD . . . C 2 34.524 -9.879 18.473 1 164.72 ? P FAD 901 A 1 
HETATM 51 O O1P FAD . . . C 2 34.478 -9.462 19.916 1 157.55 -1 O1P FAD 901 A 1 
HETATM 52 O O2P FAD . . . C 2 33.259 -10.427 17.87 1 159.17 ? O2P FAD 901 A 1 
HETATM 53 O O3P FAD . . . C 2 35.646 -11.015 18.26 1 167.31 ? O3P FAD 901 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           37 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#