data_5L3J # _model_server_result.job_id NAqwefq8oklbq5tmczXJWQ _model_server_result.datetime_utc '2024-11-23 07:38:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5L3J # _exptl.entry_id 5L3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 488.111 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.48 _cell.angle_gamma 90 _cell.entry_id 5L3J _cell.length_a 116.286 _cell.length_b 49.585 _cell.length_c 70.212 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H8 Br2 N4 O4 S' _chem_comp.formula_weight 488.111 _chem_comp.id 6G9 _chem_comp.mon_nstd_flag . _chem_comp.name '2-[[2-[[4,5-bis(bromanyl)-1~{H}-pyrrol-2-yl]carbonylamino]-1,3-benzothiazol-6-yl]amino]-2-oxidanylidene-ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C18 6G9 sing 1 n n C18 C17 6G9 sing 2 n y C18 C20 6G9 doub 3 n y C17 C16 6G9 doub 4 n y BR2 C20 6G9 sing 5 n n C20 N22 6G9 sing 6 n y C16 N22 6G9 sing 7 n y C16 C14 6G9 sing 8 n n N13 C14 6G9 sing 9 n n N13 C12 6G9 sing 10 n n C14 O15 6G9 doub 11 n n N11 C12 6G9 doub 12 n y N11 C10 6G9 sing 13 n y C12 S23 6G9 sing 14 n y C9 C10 6G9 doub 15 n y C9 C8 6G9 sing 16 n y C10 C24 6G9 sing 17 n y S23 C24 6G9 sing 18 n y C8 C7 6G9 doub 19 n y C24 C25 6G9 doub 20 n y C7 C25 6G9 sing 21 n y C7 N6 6G9 sing 22 n n N6 C4 6G9 sing 23 n n C4 O5 6G9 doub 24 n n C4 C2 6G9 sing 25 n n C2 O1 6G9 doub 26 n n C2 O3 6G9 sing 27 n n C8 H1 6G9 sing 28 n n N13 H2 6G9 sing 29 n n C17 H3 6G9 sing 30 n n N22 H4 6G9 sing 31 n n O3 H5 6G9 sing 32 n n N6 H6 6G9 sing 33 n n C9 H7 6G9 sing 34 n n C25 H8 6G9 sing 35 n n # _atom_sites.entry_id 5L3J _atom_sites.fract_transf_matrix[1][1] 0.008599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000522 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014269 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6G9 A 1 401 1 6G9 INX . C 3 IOD A 1 402 1 IOD IOD . D 4 HOH A 1 501 9 HOH HOH . D 4 HOH A 2 502 3 HOH HOH . D 4 HOH A 3 503 5 HOH HOH . D 4 HOH A 4 504 10 HOH HOH . D 4 HOH A 5 505 11 HOH HOH . D 4 HOH A 6 506 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 6G9 . A . B 2 -10.391 23.852 28.151 0.5 92.64 ? C2 6G9 401 A 1 HETATM 2 C C2 6G9 . B . B 2 -9.613 24.437 27.797 0.5 89.5 ? C2 6G9 401 A 1 HETATM 3 C C4 6G9 . A . B 2 -10.828 23.067 26.965 0.5 90.83 ? C4 6G9 401 A 1 HETATM 4 C C4 6G9 . B . B 2 -9.67 24.21 26.323 0.5 88.37 ? C4 6G9 401 A 1 HETATM 5 C C7 6G9 . . . B 2 -10.795 22.602 24.478 1 88.14 ? C7 6G9 401 A 1 HETATM 6 C C8 6G9 . . . B 2 -10.495 23.173 23.213 1 84.44 ? C8 6G9 401 A 1 HETATM 7 C C12 6G9 . . . B 2 -12.537 19.455 21.428 1 77.95 ? C12 6G9 401 A 1 HETATM 8 N N13 6G9 . . . B 2 -13.069 18.55 20.561 1 69.64 ? N13 6G9 401 A 1 HETATM 9 C C16 6G9 . . . B 2 -14.003 16.447 19.955 1 65.99 ? C16 6G9 401 A 1 HETATM 10 C C17 6G9 . . . B 2 -13.905 16.579 18.595 1 67.39 ? C17 6G9 401 A 1 HETATM 11 C C18 6G9 . . . B 2 -14.656 15.555 18.054 1 68.21 ? C18 6G9 401 A 1 HETATM 12 N N22 6G9 . . . B 2 -14.808 15.387 20.242 1 66.63 ? N22 6G9 401 A 1 HETATM 13 C C24 6G9 . . . B 2 -11.807 20.768 23.335 1 86.16 ? C24 6G9 401 A 1 HETATM 14 O O1 6G9 . A . B 2 -11.115 24.725 28.581 0.5 95.09 ? O1 6G9 401 A 1 HETATM 15 O O1 6G9 . B . B 2 -8.602 24.126 28.406 0.5 91.06 ? O1 6G9 401 A 1 HETATM 16 O O3 6G9 . A . B 2 -9.231 23.57 28.769 0.5 93.41 ? O3 6G9 401 A 1 HETATM 17 O O3 6G9 . B . B 2 -10.643 25.011 28.443 0.5 90.85 ? O3 6G9 401 A 1 HETATM 18 O O5 6G9 . A . B 2 -11.618 22.185 27.253 0.5 87.86 ? O5 6G9 401 A 1 HETATM 19 O O5 6G9 . B . B 2 -8.975 24.989 25.668 0.5 87.51 ? O5 6G9 401 A 1 HETATM 20 N N6 6G9 . . . B 2 -10.411 23.261 25.662 1 88.77 ? N6 6G9 401 A 1 HETATM 21 C C9 6G9 . . . B 2 -10.84 22.553 22.047 1 81.08 ? C9 6G9 401 A 1 HETATM 22 C C10 6G9 . . . B 2 -11.521 21.319 22.083 1 81.38 ? C10 6G9 401 A 1 HETATM 23 N N11 6G9 . . . B 2 -11.957 20.546 21.081 1 78.24 ? N11 6G9 401 A 1 HETATM 24 C C14 6G9 . . . B 2 -13.411 17.3 20.946 1 64.99 ? C14 6G9 401 A 1 HETATM 25 O O15 6G9 . . . B 2 -13.285 16.844 22.071 1 65.08 ? O15 6G9 401 A 1 HETATM 26 BR BR1 6G9 . . . B 2 -14.815 15.308 16.197 1 68.5 ? BR1 6G9 401 A 1 HETATM 27 C C20 6G9 . . . B 2 -15.199 14.842 19.079 1 65.33 ? C20 6G9 401 A 1 HETATM 28 BR BR2 6G9 . . . B 2 -16.316 13.335 18.991 1 64.68 ? BR2 6G9 401 A 1 HETATM 29 S S23 6G9 . . . B 2 -12.642 19.259 23.162 1 83.87 ? S23 6G9 401 A 1 HETATM 30 C C25 6G9 . . . B 2 -11.453 21.384 24.508 1 88.33 ? C25 6G9 401 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #