data_5L3W # _model_server_result.job_id wSofPZzCDNVukaT-FUpbYw _model_server_result.datetime_utc '2024-11-08 11:46:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l3w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5L3W # _exptl.entry_id 5L3W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5L3W _cell.length_a 144.906 _cell.length_b 144.906 _cell.length_c 49.723 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L3W _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 322 n n S O2 SO4 doub 323 n n S O3 SO4 sing 324 n n S O4 SO4 sing 325 n n # _atom_sites.entry_id 5L3W _atom_sites.fract_transf_matrix[1][1] 0.006901 _atom_sites.fract_transf_matrix[1][2] 0.003984 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007969 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 401 1 GDP GDP . C 3 SO4 A 1 402 1 SO4 SO4 . D 4 HOH A 1 501 11 HOH HOH . D 4 HOH A 2 502 3 HOH HOH . D 4 HOH A 3 503 1 HOH HOH . D 4 HOH A 4 504 8 HOH HOH . D 4 HOH A 5 505 4 HOH HOH . D 4 HOH A 6 506 32 HOH HOH . D 4 HOH A 7 507 10 HOH HOH . D 4 HOH A 8 508 14 HOH HOH . D 4 HOH A 9 509 27 HOH HOH . D 4 HOH A 10 510 6 HOH HOH . D 4 HOH A 11 511 2 HOH HOH . D 4 HOH A 12 512 17 HOH HOH . D 4 HOH A 13 513 9 HOH HOH . D 4 HOH A 14 514 21 HOH HOH . D 4 HOH A 15 515 7 HOH HOH . D 4 HOH A 16 516 33 HOH HOH . D 4 HOH A 17 517 24 HOH HOH . D 4 HOH A 18 518 22 HOH HOH . D 4 HOH A 19 519 23 HOH HOH . D 4 HOH A 20 520 5 HOH HOH . D 4 HOH A 21 521 13 HOH HOH . D 4 HOH A 22 522 39 HOH HOH . D 4 HOH A 23 523 35 HOH HOH . D 4 HOH A 24 524 19 HOH HOH . D 4 HOH A 25 525 12 HOH HOH . D 4 HOH A 26 526 20 HOH HOH . D 4 HOH A 27 527 29 HOH HOH . D 4 HOH A 28 528 16 HOH HOH . D 4 HOH A 29 529 38 HOH HOH . D 4 HOH A 30 530 30 HOH HOH . D 4 HOH A 31 531 18 HOH HOH . D 4 HOH A 32 532 31 HOH HOH . D 4 HOH A 33 533 34 HOH HOH . D 4 HOH A 34 534 15 HOH HOH . D 4 HOH A 35 535 28 HOH HOH . D 4 HOH A 36 536 36 HOH HOH . D 4 HOH A 37 537 25 HOH HOH . D 4 HOH A 38 538 40 HOH HOH . D 4 HOH A 39 539 26 HOH HOH . D 4 HOH A 40 540 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 132.816 118.204 -2.328 1 101.45 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . C 3 132.482 117.303 -3.426 1 94.87 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . C 3 132.293 119.531 -2.646 1 107.26 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . C 3 134.27 118.291 -2.176 1 110.95 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . C 3 132.248 117.712 -1.08 1 93.22 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #