data_5L4H # _model_server_result.job_id E6F0A39N0p2iFYNw9Nqf_g _model_server_result.datetime_utc '2025-01-22 09:57:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l4h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 5L4H # _exptl.entry_id 5L4H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.03 _cell.angle_gamma 90 _cell.entry_id 5L4H _cell.length_a 177.145 _cell.length_b 127.942 _cell.length_c 159.7 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L4H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 33 A CYS 33 1_555 A SG CYS 246 A CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 B SG CYS 33 B CYS 33 1_555 B SG CYS 246 B CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 C SG CYS 33 C CYS 33 1_555 C SG CYS 246 C CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 D SG CYS 33 D CYS 33 1_555 D SG CYS 246 D CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf5 E SG CYS 33 E CYS 33 1_555 E SG CYS 246 E CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 219 n n C1B O1B LMT sing 220 n n C1B O5B LMT sing 221 n n C1B H1B LMT sing 222 n n C2B C3B LMT sing 223 n n C2B O2B LMT sing 224 n n C2B H2B LMT sing 225 n n C3B C4B LMT sing 226 n n C3B O3B LMT sing 227 n n C3B H3B LMT sing 228 n n C4B C5B LMT sing 229 n n C4B O4' LMT sing 230 n n C4B H4B LMT sing 231 n n C5B C6B LMT sing 232 n n C5B O5B LMT sing 233 n n C5B H5B LMT sing 234 n n C6B O6B LMT sing 235 n n C6B "H6'2" LMT sing 236 n n C6B "H6'1" LMT sing 237 n n O1B C4' LMT sing 238 n n O2B H2O1 LMT sing 239 n n O3B H3O1 LMT sing 240 n n O4' H4O1 LMT sing 241 n n O6B H6B LMT sing 242 n n C1' C2' LMT sing 243 n n C1' O1' LMT sing 244 n n C1' O5' LMT sing 245 n n C1' H1' LMT sing 246 n n C2' C3' LMT sing 247 n n C2' O2' LMT sing 248 n n C2' H2' LMT sing 249 n n C3' C4' LMT sing 250 n n C3' O3' LMT sing 251 n n C3' H3' LMT sing 252 n n C4' C5' LMT sing 253 n n C4' H4' LMT sing 254 n n C5' C6' LMT sing 255 n n C5' O5' LMT sing 256 n n C5' H5' LMT sing 257 n n C6' O6' LMT sing 258 n n C6' H6D LMT sing 259 n n C6' H6E LMT sing 260 n n O1' C1 LMT sing 261 n n O2' H2O2 LMT sing 262 n n O3' H3O2 LMT sing 263 n n O6' H6' LMT sing 264 n n C1 C2 LMT sing 265 n n C1 H12 LMT sing 266 n n C1 H11 LMT sing 267 n n C2 C3 LMT sing 268 n n C2 H22 LMT sing 269 n n C2 H21 LMT sing 270 n n C3 C4 LMT sing 271 n n C3 H32 LMT sing 272 n n C3 H31 LMT sing 273 n n C4 C5 LMT sing 274 n n C4 H42 LMT sing 275 n n C4 H41 LMT sing 276 n n C5 C6 LMT sing 277 n n C5 H52 LMT sing 278 n n C5 H51 LMT sing 279 n n C6 C7 LMT sing 280 n n C6 H62 LMT sing 281 n n C6 H61 LMT sing 282 n n C7 C8 LMT sing 283 n n C7 H72 LMT sing 284 n n C7 H71 LMT sing 285 n n C8 C9 LMT sing 286 n n C8 H82 LMT sing 287 n n C8 H81 LMT sing 288 n n C9 C10 LMT sing 289 n n C9 H92 LMT sing 290 n n C9 H91 LMT sing 291 n n C10 C11 LMT sing 292 n n C10 H102 LMT sing 293 n n C10 H101 LMT sing 294 n n C11 C12 LMT sing 295 n n C11 H112 LMT sing 296 n n C11 H111 LMT sing 297 n n C12 H123 LMT sing 298 n n C12 H122 LMT sing 299 n n C12 H121 LMT sing 300 n n # _atom_sites.entry_id 5L4H _atom_sites.fract_transf_matrix[1][1] 0.005645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0011 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 CL A 1 401 319 CL CL . G 2 CL B 1 401 318 CL CL . H 2 CL C 1 401 318 CL CL . I 3 LMT D 1 401 318 LMT LMT . J 2 CL D 1 402 318 CL CL . K 2 CL E 1 401 318 CL CL . L 4 6JW E 1 402 1 6JW PBB . M 5 HOH A 1 501 321 HOH HOH . M 5 HOH A 2 502 330 HOH HOH . M 5 HOH A 3 503 326 HOH HOH . M 5 HOH A 4 504 329 HOH HOH . M 5 HOH A 5 505 325 HOH HOH . M 5 HOH A 6 506 326 HOH HOH . M 5 HOH A 7 507 320 HOH HOH . M 5 HOH A 8 508 323 HOH HOH . M 5 HOH A 9 509 340 HOH HOH . M 5 HOH A 10 510 322 HOH HOH . M 5 HOH A 11 511 324 HOH HOH . M 5 HOH A 12 512 337 HOH HOH . M 5 HOH A 13 513 336 HOH HOH . M 5 HOH A 14 514 331 HOH HOH . M 5 HOH A 15 515 338 HOH HOH . M 5 HOH A 16 516 332 HOH HOH . M 5 HOH A 17 517 334 HOH HOH . M 5 HOH A 18 518 341 HOH HOH . M 5 HOH A 19 519 333 HOH HOH . M 5 HOH A 20 520 335 HOH HOH . M 5 HOH A 21 521 329 HOH HOH . M 5 HOH A 22 522 332 HOH HOH . M 5 HOH A 23 523 328 HOH HOH . N 5 HOH B 1 501 323 HOH HOH . N 5 HOH B 2 502 329 HOH HOH . N 5 HOH B 3 503 340 HOH HOH . N 5 HOH B 4 504 325 HOH HOH . N 5 HOH B 5 505 319 HOH HOH . N 5 HOH B 6 506 343 HOH HOH . N 5 HOH B 7 507 326 HOH HOH . N 5 HOH B 8 508 342 HOH HOH . N 5 HOH B 9 509 341 HOH HOH . N 5 HOH B 10 510 328 HOH HOH . N 5 HOH B 11 511 321 HOH HOH . N 5 HOH B 12 512 320 HOH HOH . N 5 HOH B 13 513 333 HOH HOH . N 5 HOH B 14 514 338 HOH HOH . N 5 HOH B 15 515 335 HOH HOH . N 5 HOH B 16 516 327 HOH HOH . N 5 HOH B 17 517 322 HOH HOH . N 5 HOH B 18 518 339 HOH HOH . N 5 HOH B 19 519 331 HOH HOH . N 5 HOH B 20 520 330 HOH HOH . N 5 HOH B 21 521 327 HOH HOH . N 5 HOH B 22 522 344 HOH HOH . N 5 HOH B 23 523 334 HOH HOH . N 5 HOH B 24 524 336 HOH HOH . N 5 HOH B 25 525 332 HOH HOH . N 5 HOH B 26 526 337 HOH HOH . N 5 HOH B 27 527 336 HOH HOH . O 5 HOH C 1 501 323 HOH HOH . O 5 HOH C 2 502 321 HOH HOH . O 5 HOH C 3 503 338 HOH HOH . O 5 HOH C 4 504 322 HOH HOH . O 5 HOH C 5 505 327 HOH HOH . O 5 HOH C 6 506 328 HOH HOH . O 5 HOH C 7 507 319 HOH HOH . O 5 HOH C 8 508 331 HOH HOH . O 5 HOH C 9 509 320 HOH HOH . O 5 HOH C 10 510 324 HOH HOH . O 5 HOH C 11 511 324 HOH HOH . O 5 HOH C 12 512 322 HOH HOH . O 5 HOH C 13 513 325 HOH HOH . O 5 HOH C 14 514 334 HOH HOH . O 5 HOH C 15 515 335 HOH HOH . O 5 HOH C 16 516 330 HOH HOH . O 5 HOH C 17 517 337 HOH HOH . O 5 HOH C 18 518 333 HOH HOH . O 5 HOH C 19 519 330 HOH HOH . O 5 HOH C 20 520 336 HOH HOH . P 5 HOH D 1 501 326 HOH HOH . P 5 HOH D 2 502 319 HOH HOH . P 5 HOH D 3 503 327 HOH HOH . P 5 HOH D 4 504 329 HOH HOH . P 5 HOH D 5 505 324 HOH HOH . P 5 HOH D 6 506 321 HOH HOH . P 5 HOH D 7 507 334 HOH HOH . P 5 HOH D 8 508 320 HOH HOH . P 5 HOH D 9 509 332 HOH HOH . P 5 HOH D 10 510 335 HOH HOH . P 5 HOH D 11 511 333 HOH HOH . P 5 HOH D 12 512 329 HOH HOH . P 5 HOH D 13 513 323 HOH HOH . P 5 HOH D 14 514 323 HOH HOH . P 5 HOH D 15 515 331 HOH HOH . P 5 HOH D 16 516 328 HOH HOH . P 5 HOH D 17 517 330 HOH HOH . Q 5 HOH E 1 501 327 HOH HOH . Q 5 HOH E 2 502 320 HOH HOH . Q 5 HOH E 3 503 324 HOH HOH . Q 5 HOH E 4 504 325 HOH HOH . Q 5 HOH E 5 505 322 HOH HOH . Q 5 HOH E 6 506 333 HOH HOH . Q 5 HOH E 7 507 326 HOH HOH . Q 5 HOH E 8 508 332 HOH HOH . Q 5 HOH E 9 509 337 HOH HOH . Q 5 HOH E 10 510 338 HOH HOH . Q 5 HOH E 11 511 328 HOH HOH . Q 5 HOH E 12 512 331 HOH HOH . Q 5 HOH E 13 513 319 HOH HOH . Q 5 HOH E 14 514 334 HOH HOH . Q 5 HOH E 15 515 339 HOH HOH . Q 5 HOH E 16 516 335 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMT . . . I 3 57.978 -25.287 49.648 1 56.39 ? C1 LMT 401 D 1 HETATM 2 C C2 LMT . . . I 3 58.278 -25.749 48.255 1 60.98 ? C2 LMT 401 D 1 HETATM 3 C C3 LMT . . . I 3 56.93 -25.679 47.574 1 64.94 ? C3 LMT 401 D 1 HETATM 4 C C4 LMT . . . I 3 57.084 -25.848 46.094 1 66.1 ? C4 LMT 401 D 1 HETATM 5 C C5 LMT . . . I 3 55.784 -25.369 45.499 1 66.1 ? C5 LMT 401 D 1 HETATM 6 C C6 LMT . . . I 3 55.973 -25.438 44.021 1 66.02 ? C6 LMT 401 D 1 HETATM 7 C C7 LMT . . . I 3 54.702 -25.018 43.363 1 64.83 ? C7 LMT 401 D 1 HETATM 8 C C8 LMT . . . I 3 54.665 -25.819 42.095 1 64.03 ? C8 LMT 401 D 1 HETATM 9 C C9 LMT . . . I 3 53.544 -25.352 41.214 1 65.27 ? C9 LMT 401 D 1 HETATM 10 C C10 LMT . . . I 3 53.728 -26.009 39.865 1 67.46 ? C10 LMT 401 D 1 HETATM 11 C C11 LMT . . . I 3 52.775 -25.407 38.833 1 71.68 ? C11 LMT 401 D 1 HETATM 12 C C12 LMT . . . I 3 53.046 -26.099 37.473 1 72.84 ? C12 LMT 401 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #