data_5L5R # _model_server_result.job_id Yij0mC39854bSUMSKtLEjA _model_server_result.datetime_utc '2024-11-26 17:00:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l5r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":201}' # _entry.id 5L5R # _exptl.entry_id 5L5R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.67 _cell.angle_gamma 90 _cell.entry_id 5L5R _cell.length_a 133.83 _cell.length_b 301.16 _cell.length_c 144.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L5R _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 CA N N ? 15 EA N N ? 15 FA N N ? 15 GA N N ? 15 HA N N ? 15 IA N N ? 15 JA N N ? 15 LA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G OG1 THR 17 G THR 8 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc2 G O TYR 128 G TYR 119 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc3 G O ARG 131 G ARG 122 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc4 G O MET 134 G MET 125 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc5 I O ASP 178 I ASP 177 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc6 I O SER 181 I SER 180 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc7 I O ASP 205 I ASP 204 1_555 GA MG MG . I MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc8 GA MG MG . I MG 302 1_555 Y O ALA 164 Y ALA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc9 GA MG MG . I MG 302 1_555 Y O ASP 167 Y ASP 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc10 GA MG MG . I MG 302 1_555 Y O SER 170 Y SER 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc11 K O ALA 164 K ALA 164 1_555 HA MG MG . K MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc12 K O ASP 167 K ASP 167 1_555 HA MG MG . K MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc13 K O SER 170 K SER 170 1_555 HA MG MG . K MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc14 HA MG MG . K MG 301 1_555 W O ASP 205 W ASP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc15 L OXT ASP 222 L ASP 222 1_555 IA MG MG . L MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc16 IA MG MG . L MG 301 1_555 V O ILE 163 V ILE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc17 IA MG MG . L MG 301 1_555 V O ASP 166 V ASP 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc18 IA MG MG . L MG 301 1_555 V O SER 169 V SER 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc19 N O ILE 163 N ILE 163 1_555 JA MG MG . N MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc20 N O SER 169 N SER 169 1_555 JA MG MG . N MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc21 Z O THR 192 Z THR 192 1_555 LA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc22 Z O HIS 195 Z HIS 195 1_555 LA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc23 Z O VAL 198 Z VAL 198 1_555 LA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5L5R _atom_sites.fract_transf_matrix[1][1] 0.007472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00312 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00332 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 15 MG G 1 301 8 MG MG . DA 16 CL G 1 302 11 CL CL . EA 15 MG H 1 301 7 MG MG . FA 15 MG I 1 301 9 MG MG . GA 15 MG I 1 302 4 MG MG . HA 15 MG K 1 301 1 MG MG . IA 15 MG L 1 301 2 MG MG . JA 15 MG N 1 201 5 MG MG . KA 16 CL U 1 301 12 CL CL . LA 15 MG Z 1 301 3 MG MG . MA 17 HOH A 1 301 40 HOH HOH . MA 17 HOH A 2 302 61 HOH HOH . MA 17 HOH A 3 303 56 HOH HOH . MA 17 HOH A 4 304 82 HOH HOH . MA 17 HOH A 5 305 67 HOH HOH . NA 17 HOH B 1 301 86 HOH HOH . NA 17 HOH B 2 302 80 HOH HOH . NA 17 HOH B 3 303 22 HOH HOH . NA 17 HOH B 4 304 52 HOH HOH . NA 17 HOH B 5 305 111 HOH HOH . NA 17 HOH B 6 306 100 HOH HOH . OA 17 HOH C 1 301 185 HOH HOH . OA 17 HOH C 2 302 150 HOH HOH . OA 17 HOH C 3 303 81 HOH HOH . OA 17 HOH C 4 304 143 HOH HOH . OA 17 HOH C 5 305 155 HOH HOH . OA 17 HOH C 6 306 130 HOH HOH . PA 17 HOH D 1 301 96 HOH HOH . PA 17 HOH D 2 302 31 HOH HOH . PA 17 HOH D 3 303 167 HOH HOH . PA 17 HOH D 4 304 133 HOH HOH . PA 17 HOH D 5 305 59 HOH HOH . PA 17 HOH D 6 306 60 HOH HOH . PA 17 HOH D 7 307 144 HOH HOH . PA 17 HOH D 8 308 119 HOH HOH . PA 17 HOH D 9 309 120 HOH HOH . PA 17 HOH D 10 310 122 HOH HOH . QA 17 HOH E 1 301 48 HOH HOH . QA 17 HOH E 2 302 170 HOH HOH . QA 17 HOH E 3 303 116 HOH HOH . QA 17 HOH E 4 304 7 HOH HOH . RA 17 HOH F 1 301 37 HOH HOH . RA 17 HOH F 2 302 79 HOH HOH . RA 17 HOH F 3 303 142 HOH HOH . RA 17 HOH F 4 304 42 HOH HOH . RA 17 HOH F 5 305 50 HOH HOH . RA 17 HOH F 6 306 115 HOH HOH . RA 17 HOH F 7 307 146 HOH HOH . SA 17 HOH G 1 401 54 HOH HOH . SA 17 HOH G 2 402 78 HOH HOH . SA 17 HOH G 3 403 118 HOH HOH . SA 17 HOH G 4 404 8 HOH HOH . SA 17 HOH G 5 405 188 HOH HOH . SA 17 HOH G 6 406 53 HOH HOH . TA 17 HOH H 1 401 16 HOH HOH . TA 17 HOH H 2 402 173 HOH HOH . TA 17 HOH H 3 403 6 HOH HOH . TA 17 HOH H 4 404 74 HOH HOH . TA 17 HOH H 5 405 138 HOH HOH . UA 17 HOH I 1 401 92 HOH HOH . UA 17 HOH I 2 402 107 HOH HOH . UA 17 HOH I 3 403 32 HOH HOH . UA 17 HOH I 4 404 47 HOH HOH . UA 17 HOH I 5 405 182 HOH HOH . UA 17 HOH I 6 406 62 HOH HOH . UA 17 HOH I 7 407 101 HOH HOH . UA 17 HOH I 8 408 131 HOH HOH . UA 17 HOH I 9 409 97 HOH HOH . VA 17 HOH J 1 201 66 HOH HOH . VA 17 HOH J 2 202 87 HOH HOH . VA 17 HOH J 3 203 189 HOH HOH . VA 17 HOH J 4 204 21 HOH HOH . VA 17 HOH J 5 205 125 HOH HOH . VA 17 HOH J 6 206 174 HOH HOH . VA 17 HOH J 7 207 109 HOH HOH . VA 17 HOH J 8 208 124 HOH HOH . WA 17 HOH K 1 401 108 HOH HOH . WA 17 HOH K 2 402 85 HOH HOH . WA 17 HOH K 3 403 51 HOH HOH . WA 17 HOH K 4 404 129 HOH HOH . WA 17 HOH K 5 405 136 HOH HOH . XA 17 HOH L 1 401 34 HOH HOH . XA 17 HOH L 2 402 91 HOH HOH . XA 17 HOH L 3 403 141 HOH HOH . XA 17 HOH L 4 404 72 HOH HOH . XA 17 HOH L 5 405 114 HOH HOH . XA 17 HOH L 6 406 160 HOH HOH . XA 17 HOH L 7 407 99 HOH HOH . XA 17 HOH L 8 408 55 HOH HOH . YA 17 HOH M 1 301 39 HOH HOH . YA 17 HOH M 2 302 38 HOH HOH . YA 17 HOH M 3 303 65 HOH HOH . YA 17 HOH M 4 304 148 HOH HOH . YA 17 HOH M 5 305 20 HOH HOH . YA 17 HOH M 6 306 2 HOH HOH . ZA 17 HOH N 1 301 43 HOH HOH . ZA 17 HOH N 2 302 83 HOH HOH . ZA 17 HOH N 3 303 24 HOH HOH . ZA 17 HOH N 4 304 35 HOH HOH . ZA 17 HOH N 5 305 123 HOH HOH . ZA 17 HOH N 6 306 153 HOH HOH . ZA 17 HOH N 7 307 4 HOH HOH . ZA 17 HOH N 8 308 135 HOH HOH . ZA 17 HOH N 9 309 110 HOH HOH . AB 17 HOH O 1 301 11 HOH HOH . AB 17 HOH O 2 302 152 HOH HOH . AB 17 HOH O 3 303 172 HOH HOH . BB 17 HOH P 1 301 88 HOH HOH . BB 17 HOH P 2 302 151 HOH HOH . BB 17 HOH P 3 303 68 HOH HOH . BB 17 HOH P 4 304 171 HOH HOH . BB 17 HOH P 5 305 69 HOH HOH . BB 17 HOH P 6 306 27 HOH HOH . BB 17 HOH P 7 307 25 HOH HOH . BB 17 HOH P 8 308 163 HOH HOH . BB 17 HOH P 9 309 145 HOH HOH . CB 17 HOH Q 1 301 127 HOH HOH . CB 17 HOH Q 2 302 128 HOH HOH . CB 17 HOH Q 3 303 36 HOH HOH . CB 17 HOH Q 4 304 156 HOH HOH . CB 17 HOH Q 5 305 158 HOH HOH . CB 17 HOH Q 6 306 154 HOH HOH . CB 17 HOH Q 7 307 157 HOH HOH . DB 17 HOH R 1 301 184 HOH HOH . DB 17 HOH R 2 302 84 HOH HOH . DB 17 HOH R 3 303 137 HOH HOH . DB 17 HOH R 4 304 149 HOH HOH . DB 17 HOH R 5 305 162 HOH HOH . EB 17 HOH S 1 301 46 HOH HOH . EB 17 HOH S 2 302 183 HOH HOH . EB 17 HOH S 3 303 140 HOH HOH . EB 17 HOH S 4 304 113 HOH HOH . EB 17 HOH S 5 305 75 HOH HOH . EB 17 HOH S 6 306 18 HOH HOH . EB 17 HOH S 7 307 165 HOH HOH . EB 17 HOH S 8 308 177 HOH HOH . FB 17 HOH T 1 301 164 HOH HOH . FB 17 HOH T 2 302 104 HOH HOH . FB 17 HOH T 3 303 9 HOH HOH . FB 17 HOH T 4 304 77 HOH HOH . FB 17 HOH T 5 305 175 HOH HOH . FB 17 HOH T 6 306 159 HOH HOH . FB 17 HOH T 7 307 147 HOH HOH . GB 17 HOH U 1 401 23 HOH HOH . GB 17 HOH U 2 402 95 HOH HOH . GB 17 HOH U 3 403 30 HOH HOH . GB 17 HOH U 4 404 29 HOH HOH . GB 17 HOH U 5 405 102 HOH HOH . GB 17 HOH U 6 406 15 HOH HOH . GB 17 HOH U 7 407 90 HOH HOH . GB 17 HOH U 8 408 33 HOH HOH . HB 17 HOH V 1 401 64 HOH HOH . HB 17 HOH V 2 402 169 HOH HOH . HB 17 HOH V 3 403 14 HOH HOH . HB 17 HOH V 4 404 112 HOH HOH . HB 17 HOH V 5 405 13 HOH HOH . HB 17 HOH V 6 406 179 HOH HOH . IB 17 HOH W 1 301 117 HOH HOH . IB 17 HOH W 2 302 139 HOH HOH . IB 17 HOH W 3 303 45 HOH HOH . IB 17 HOH W 4 304 89 HOH HOH . IB 17 HOH W 5 305 161 HOH HOH . IB 17 HOH W 6 306 166 HOH HOH . IB 17 HOH W 7 307 70 HOH HOH . JB 17 HOH X 1 201 187 HOH HOH . JB 17 HOH X 2 202 17 HOH HOH . JB 17 HOH X 3 203 106 HOH HOH . KB 17 HOH Y 1 401 76 HOH HOH . KB 17 HOH Y 2 402 126 HOH HOH . KB 17 HOH Y 3 403 3 HOH HOH . KB 17 HOH Y 4 404 121 HOH HOH . KB 17 HOH Y 5 405 132 HOH HOH . KB 17 HOH Y 6 406 180 HOH HOH . KB 17 HOH Y 7 407 178 HOH HOH . LB 17 HOH Z 1 401 103 HOH HOH . LB 17 HOH Z 2 402 57 HOH HOH . LB 17 HOH Z 3 403 181 HOH HOH . LB 17 HOH Z 4 404 168 HOH HOH . LB 17 HOH Z 5 405 98 HOH HOH . MB 17 HOH a 1 301 93 HOH HOH . MB 17 HOH a 2 302 58 HOH HOH . MB 17 HOH a 3 303 63 HOH HOH . MB 17 HOH a 4 304 176 HOH HOH . MB 17 HOH a 5 305 19 HOH HOH . MB 17 HOH a 6 306 94 HOH HOH . MB 17 HOH a 7 307 28 HOH HOH . MB 17 HOH a 8 308 186 HOH HOH . MB 17 HOH a 9 309 73 HOH HOH . NB 17 HOH b 1 201 10 HOH HOH . NB 17 HOH b 2 202 5 HOH HOH . NB 17 HOH b 3 203 26 HOH HOH . NB 17 HOH b 4 204 134 HOH HOH . NB 17 HOH b 5 205 41 HOH HOH . NB 17 HOH b 6 206 44 HOH HOH . NB 17 HOH b 7 207 1 HOH HOH . NB 17 HOH b 8 208 12 HOH HOH . NB 17 HOH b 9 209 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id JA _atom_site.label_entity_id 15 _atom_site.Cartn_x 48.505 _atom_site.Cartn_y -150.179 _atom_site.Cartn_z 66.915 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id N _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 92 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #