data_5L7T
#
_model_server_result.job_id            p6wKDjWnR79OBKI8HcbMJQ 
_model_server_result.datetime_utc      '2024-11-15 00:33:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5l7t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    5L7T 
#
_exptl.entry_id    5L7T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5L7T 
_cell.length_a            91.243 
_cell.length_b            91.243 
_cell.length_c            131.398 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5L7T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -91.243 0 
3 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 6_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -91.243 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 52 A GLU 50 1_555 C NA NA . A NA 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc2 A O GLU 52 A GLU 50 1_555 C NA NA . A NA 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc3 A O LEU 55 A LEU 53 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc4 A O ALA 58 A ALA 56 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc5 C NA NA . A NA 302 1_555 E O HOH . A HOH 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
metalc ? metalc6 C NA NA . A NA 302 1_555 E O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc7 C NA NA . A NA 302 1_555 E O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5L7T 
_atom_sites.fract_transf_matrix[1][1]    0.01096 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01096 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00761 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAD A 1 301 2 NAD NAD . 
C 3 NA A 1 302 1 NA NA . 
D 4 6QJ A 1 303 1 6QJ F17 . 
E 5 HOH A 1 401 188 HOH HOH . 
E 5 HOH A 2 402 85 HOH HOH . 
E 5 HOH A 3 403 184 HOH HOH . 
E 5 HOH A 4 404 211 HOH HOH . 
E 5 HOH A 5 405 67 HOH HOH . 
E 5 HOH A 6 406 81 HOH HOH . 
E 5 HOH A 7 407 137 HOH HOH . 
E 5 HOH A 8 408 125 HOH HOH . 
E 5 HOH A 9 409 127 HOH HOH . 
E 5 HOH A 10 410 4 HOH HOH . 
E 5 HOH A 11 411 10 HOH HOH . 
E 5 HOH A 12 412 128 HOH HOH . 
E 5 HOH A 13 413 9 HOH HOH . 
E 5 HOH A 14 414 25 HOH HOH . 
E 5 HOH A 15 415 54 HOH HOH . 
E 5 HOH A 16 416 79 HOH HOH . 
E 5 HOH A 17 417 212 HOH HOH . 
E 5 HOH A 18 418 86 HOH HOH . 
E 5 HOH A 19 419 46 HOH HOH . 
E 5 HOH A 20 420 114 HOH HOH . 
E 5 HOH A 21 421 5 HOH HOH . 
E 5 HOH A 22 422 56 HOH HOH . 
E 5 HOH A 23 423 108 HOH HOH . 
E 5 HOH A 24 424 13 HOH HOH . 
E 5 HOH A 25 425 11 HOH HOH . 
E 5 HOH A 26 426 58 HOH HOH . 
E 5 HOH A 27 427 99 HOH HOH . 
E 5 HOH A 28 428 116 HOH HOH . 
E 5 HOH A 29 429 92 HOH HOH . 
E 5 HOH A 30 430 91 HOH HOH . 
E 5 HOH A 31 431 135 HOH HOH . 
E 5 HOH A 32 432 18 HOH HOH . 
E 5 HOH A 33 433 22 HOH HOH . 
E 5 HOH A 34 434 24 HOH HOH . 
E 5 HOH A 35 435 43 HOH HOH . 
E 5 HOH A 36 436 213 HOH HOH . 
E 5 HOH A 37 437 68 HOH HOH . 
E 5 HOH A 38 438 8 HOH HOH . 
E 5 HOH A 39 439 31 HOH HOH . 
E 5 HOH A 40 440 38 HOH HOH . 
E 5 HOH A 41 441 93 HOH HOH . 
E 5 HOH A 42 442 53 HOH HOH . 
E 5 HOH A 43 443 117 HOH HOH . 
E 5 HOH A 44 444 82 HOH HOH . 
E 5 HOH A 45 445 101 HOH HOH . 
E 5 HOH A 46 446 94 HOH HOH . 
E 5 HOH A 47 447 176 HOH HOH . 
E 5 HOH A 48 448 34 HOH HOH . 
E 5 HOH A 49 449 113 HOH HOH . 
E 5 HOH A 50 450 64 HOH HOH . 
E 5 HOH A 51 451 17 HOH HOH . 
E 5 HOH A 52 452 151 HOH HOH . 
E 5 HOH A 53 453 95 HOH HOH . 
E 5 HOH A 54 454 115 HOH HOH . 
E 5 HOH A 55 455 29 HOH HOH . 
E 5 HOH A 56 456 32 HOH HOH . 
E 5 HOH A 57 457 63 HOH HOH . 
E 5 HOH A 58 458 121 HOH HOH . 
E 5 HOH A 59 459 83 HOH HOH . 
E 5 HOH A 60 460 12 HOH HOH . 
E 5 HOH A 61 461 72 HOH HOH . 
E 5 HOH A 62 462 88 HOH HOH . 
E 5 HOH A 63 463 190 HOH HOH . 
E 5 HOH A 64 464 33 HOH HOH . 
E 5 HOH A 65 465 57 HOH HOH . 
E 5 HOH A 66 466 80 HOH HOH . 
E 5 HOH A 67 467 14 HOH HOH . 
E 5 HOH A 68 468 90 HOH HOH . 
E 5 HOH A 69 469 69 HOH HOH . 
E 5 HOH A 70 470 20 HOH HOH . 
E 5 HOH A 71 471 109 HOH HOH . 
E 5 HOH A 72 472 73 HOH HOH . 
E 5 HOH A 73 473 167 HOH HOH . 
E 5 HOH A 74 474 199 HOH HOH . 
E 5 HOH A 75 475 78 HOH HOH . 
E 5 HOH A 76 476 45 HOH HOH . 
E 5 HOH A 77 477 59 HOH HOH . 
E 5 HOH A 78 478 75 HOH HOH . 
E 5 HOH A 79 479 149 HOH HOH . 
E 5 HOH A 80 480 100 HOH HOH . 
E 5 HOH A 81 481 124 HOH HOH . 
E 5 HOH A 82 482 7 HOH HOH . 
E 5 HOH A 83 483 98 HOH HOH . 
E 5 HOH A 84 484 174 HOH HOH . 
E 5 HOH A 85 485 192 HOH HOH . 
E 5 HOH A 86 486 52 HOH HOH . 
E 5 HOH A 87 487 40 HOH HOH . 
E 5 HOH A 88 488 42 HOH HOH . 
E 5 HOH A 89 489 28 HOH HOH . 
E 5 HOH A 90 490 51 HOH HOH . 
E 5 HOH A 91 491 87 HOH HOH . 
E 5 HOH A 92 492 55 HOH HOH . 
E 5 HOH A 93 493 193 HOH HOH . 
E 5 HOH A 94 494 103 HOH HOH . 
E 5 HOH A 95 495 107 HOH HOH . 
E 5 HOH A 96 496 102 HOH HOH . 
E 5 HOH A 97 497 1 HOH HOH . 
E 5 HOH A 98 498 62 HOH HOH . 
E 5 HOH A 99 499 44 HOH HOH . 
E 5 HOH A 100 500 39 HOH HOH . 
E 5 HOH A 101 501 216 HOH HOH . 
E 5 HOH A 102 502 187 HOH HOH . 
E 5 HOH A 103 503 126 HOH HOH . 
E 5 HOH A 104 504 202 HOH HOH . 
E 5 HOH A 105 505 47 HOH HOH . 
E 5 HOH A 106 506 21 HOH HOH . 
E 5 HOH A 107 507 76 HOH HOH . 
E 5 HOH A 108 508 148 HOH HOH . 
E 5 HOH A 109 509 106 HOH HOH . 
E 5 HOH A 110 510 160 HOH HOH . 
E 5 HOH A 111 511 161 HOH HOH . 
E 5 HOH A 112 512 147 HOH HOH . 
E 5 HOH A 113 513 35 HOH HOH . 
E 5 HOH A 114 514 84 HOH HOH . 
E 5 HOH A 115 515 16 HOH HOH . 
E 5 HOH A 116 516 140 HOH HOH . 
E 5 HOH A 117 517 138 HOH HOH . 
E 5 HOH A 118 518 195 HOH HOH . 
E 5 HOH A 119 519 131 HOH HOH . 
E 5 HOH A 120 520 177 HOH HOH . 
E 5 HOH A 121 521 36 HOH HOH . 
E 5 HOH A 122 522 74 HOH HOH . 
E 5 HOH A 123 523 173 HOH HOH . 
E 5 HOH A 124 524 141 HOH HOH . 
E 5 HOH A 125 525 129 HOH HOH . 
E 5 HOH A 126 526 27 HOH HOH . 
E 5 HOH A 127 527 217 HOH HOH . 
E 5 HOH A 128 528 175 HOH HOH . 
E 5 HOH A 129 529 48 HOH HOH . 
E 5 HOH A 130 530 183 HOH HOH . 
E 5 HOH A 131 531 23 HOH HOH . 
E 5 HOH A 132 532 71 HOH HOH . 
E 5 HOH A 133 533 155 HOH HOH . 
E 5 HOH A 134 534 77 HOH HOH . 
E 5 HOH A 135 535 185 HOH HOH . 
E 5 HOH A 136 536 179 HOH HOH . 
E 5 HOH A 137 537 209 HOH HOH . 
E 5 HOH A 138 538 180 HOH HOH . 
E 5 HOH A 139 539 165 HOH HOH . 
E 5 HOH A 140 540 2 HOH HOH . 
E 5 HOH A 141 541 89 HOH HOH . 
E 5 HOH A 142 542 169 HOH HOH . 
E 5 HOH A 143 543 123 HOH HOH . 
E 5 HOH A 144 544 65 HOH HOH . 
E 5 HOH A 145 545 196 HOH HOH . 
E 5 HOH A 146 546 171 HOH HOH . 
E 5 HOH A 147 547 133 HOH HOH . 
E 5 HOH A 148 548 66 HOH HOH . 
E 5 HOH A 149 549 182 HOH HOH . 
E 5 HOH A 150 550 104 HOH HOH . 
E 5 HOH A 151 551 181 HOH HOH . 
E 5 HOH A 152 552 200 HOH HOH . 
E 5 HOH A 153 553 142 HOH HOH . 
E 5 HOH A 154 554 170 HOH HOH . 
E 5 HOH A 155 555 215 HOH HOH . 
E 5 HOH A 156 556 186 HOH HOH . 
E 5 HOH A 157 557 30 HOH HOH . 
E 5 HOH A 158 558 70 HOH HOH . 
E 5 HOH A 159 559 152 HOH HOH . 
E 5 HOH A 160 560 198 HOH HOH . 
E 5 HOH A 161 561 110 HOH HOH . 
E 5 HOH A 162 562 132 HOH HOH . 
E 5 HOH A 163 563 144 HOH HOH . 
E 5 HOH A 164 564 218 HOH HOH . 
E 5 HOH A 165 565 118 HOH HOH . 
E 5 HOH A 166 566 219 HOH HOH . 
E 5 HOH A 167 567 120 HOH HOH . 
E 5 HOH A 168 568 143 HOH HOH . 
E 5 HOH A 169 569 203 HOH HOH . 
E 5 HOH A 170 570 105 HOH HOH . 
E 5 HOH A 171 571 136 HOH HOH . 
E 5 HOH A 172 572 197 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -4.805 
_atom_site.Cartn_y               -10.67 
_atom_site.Cartn_z               -20.707 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.89 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#