data_5L7Y # _model_server_result.job_id UiV-Kkl7gFfHAKLMQlETgw _model_server_result.datetime_utc '2024-11-15 00:37:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l7y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5L7Y # _exptl.entry_id 5L7Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.282 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4-fluoranyl-3-oxidanyl-phenyl)-[6-(2-fluoranyl-3-oxidanyl-phenyl)pyridin-2-yl]methanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5L7Y _cell.length_a 91.571 _cell.length_b 91.571 _cell.length_c 132.518 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L7Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -91.571 0 0 3 'crystal symmetry operation' 5_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -91.571 0 0 4 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 52 A GLU 50 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A O LEU 55 A LEU 53 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc3 A O ALA 58 A ALA 56 1_555 C NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc4 C NA NA . A NA 302 1_555 F O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc5 C NA NA . A NA 302 1_555 F O HOH . A HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc6 C NA NA . A NA 302 1_555 F O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'C18 H11 F2 N O3' _chem_comp.formula_weight 327.282 _chem_comp.id 6QO _chem_comp.mon_nstd_flag . _chem_comp.name (4-fluoranyl-3-oxidanyl-phenyl)-[6-(2-fluoranyl-3-oxidanyl-phenyl)pyridin-2-yl]methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F C14 6QO sing 1 n n O2 C13 6QO sing 2 n n C6 C7 6QO doub 3 n y C6 C5 6QO sing 4 n y C7 C8 6QO sing 5 n y C14 C13 6QO doub 6 n y C14 C9 6QO sing 7 n y C13 C12 6QO sing 8 n y C5 C4 6QO doub 9 n y C8 C9 6QO sing 10 n n C8 N 6QO doub 11 n y C9 C10 6QO doub 12 n y C12 C11 6QO doub 13 n y C4 N 6QO sing 14 n y C4 C3 6QO sing 15 n n C10 C11 6QO sing 16 n y O1 C3 6QO doub 17 n n C3 C2 6QO sing 18 n n C2 C15 6QO doub 19 n y C2 C1 6QO sing 20 n y C15 C16 6QO sing 21 n y C16 C17 6QO doub 22 n y C1 C 6QO doub 23 n y C17 C 6QO sing 24 n y C17 F1 6QO sing 25 n n C O 6QO sing 26 n n C1 H1 6QO sing 27 n n C5 H2 6QO sing 28 n n C6 H3 6QO sing 29 n n C7 H4 6QO sing 30 n n C10 H5 6QO sing 31 n n C16 H6 6QO sing 32 n n O H7 6QO sing 33 n n C15 H8 6QO sing 34 n n O2 H9 6QO sing 35 n n C12 H10 6QO sing 36 n n C11 H11 6QO sing 37 n n # _atom_sites.entry_id 5L7Y _atom_sites.fract_transf_matrix[1][1] 0.01092 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01092 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007546 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 301 2 NAD NAD . C 3 NA A 1 302 1 NA NA . D 4 6QO A 1 303 1 6QO F19 . E 4 6QO A 1 304 2 6QO F19 . F 5 HOH A 1 401 214 HOH HOH . F 5 HOH A 2 402 135 HOH HOH . F 5 HOH A 3 403 121 HOH HOH . F 5 HOH A 4 404 20 HOH HOH . F 5 HOH A 5 405 133 HOH HOH . F 5 HOH A 6 406 137 HOH HOH . F 5 HOH A 7 407 69 HOH HOH . F 5 HOH A 8 408 38 HOH HOH . F 5 HOH A 9 409 91 HOH HOH . F 5 HOH A 10 410 148 HOH HOH . F 5 HOH A 11 411 35 HOH HOH . F 5 HOH A 12 412 104 HOH HOH . F 5 HOH A 13 413 75 HOH HOH . F 5 HOH A 14 414 29 HOH HOH . F 5 HOH A 15 415 19 HOH HOH . F 5 HOH A 16 416 58 HOH HOH . F 5 HOH A 17 417 155 HOH HOH . F 5 HOH A 18 418 15 HOH HOH . F 5 HOH A 19 419 55 HOH HOH . F 5 HOH A 20 420 60 HOH HOH . F 5 HOH A 21 421 145 HOH HOH . F 5 HOH A 22 422 80 HOH HOH . F 5 HOH A 23 423 93 HOH HOH . F 5 HOH A 24 424 34 HOH HOH . F 5 HOH A 25 425 42 HOH HOH . F 5 HOH A 26 426 86 HOH HOH . F 5 HOH A 27 427 138 HOH HOH . F 5 HOH A 28 428 1 HOH HOH . F 5 HOH A 29 429 147 HOH HOH . F 5 HOH A 30 430 95 HOH HOH . F 5 HOH A 31 431 62 HOH HOH . F 5 HOH A 32 432 161 HOH HOH . F 5 HOH A 33 433 106 HOH HOH . F 5 HOH A 34 434 44 HOH HOH . F 5 HOH A 35 435 110 HOH HOH . F 5 HOH A 36 436 68 HOH HOH . F 5 HOH A 37 437 17 HOH HOH . F 5 HOH A 38 438 61 HOH HOH . F 5 HOH A 39 439 22 HOH HOH . F 5 HOH A 40 440 117 HOH HOH . F 5 HOH A 41 441 194 HOH HOH . F 5 HOH A 42 442 101 HOH HOH . F 5 HOH A 43 443 3 HOH HOH . F 5 HOH A 44 444 26 HOH HOH . F 5 HOH A 45 445 206 HOH HOH . F 5 HOH A 46 446 13 HOH HOH . F 5 HOH A 47 447 113 HOH HOH . F 5 HOH A 48 448 177 HOH HOH . F 5 HOH A 49 449 164 HOH HOH . F 5 HOH A 50 450 134 HOH HOH . F 5 HOH A 51 451 109 HOH HOH . F 5 HOH A 52 452 45 HOH HOH . F 5 HOH A 53 453 118 HOH HOH . F 5 HOH A 54 454 64 HOH HOH . F 5 HOH A 55 455 2 HOH HOH . F 5 HOH A 56 456 167 HOH HOH . F 5 HOH A 57 457 168 HOH HOH . F 5 HOH A 58 458 127 HOH HOH . F 5 HOH A 59 459 33 HOH HOH . F 5 HOH A 60 460 30 HOH HOH . F 5 HOH A 61 461 149 HOH HOH . F 5 HOH A 62 462 73 HOH HOH . F 5 HOH A 63 463 76 HOH HOH . F 5 HOH A 64 464 92 HOH HOH . F 5 HOH A 65 465 70 HOH HOH . F 5 HOH A 66 466 7 HOH HOH . F 5 HOH A 67 467 100 HOH HOH . F 5 HOH A 68 468 65 HOH HOH . F 5 HOH A 69 469 94 HOH HOH . F 5 HOH A 70 470 21 HOH HOH . F 5 HOH A 71 471 139 HOH HOH . F 5 HOH A 72 472 59 HOH HOH . F 5 HOH A 73 473 5 HOH HOH . F 5 HOH A 74 474 87 HOH HOH . F 5 HOH A 75 475 18 HOH HOH . F 5 HOH A 76 476 105 HOH HOH . F 5 HOH A 77 477 157 HOH HOH . F 5 HOH A 78 478 103 HOH HOH . F 5 HOH A 79 479 4 HOH HOH . F 5 HOH A 80 480 85 HOH HOH . F 5 HOH A 81 481 54 HOH HOH . F 5 HOH A 82 482 40 HOH HOH . F 5 HOH A 83 483 77 HOH HOH . F 5 HOH A 84 484 63 HOH HOH . F 5 HOH A 85 485 78 HOH HOH . F 5 HOH A 86 486 71 HOH HOH . F 5 HOH A 87 487 28 HOH HOH . F 5 HOH A 88 488 9 HOH HOH . F 5 HOH A 89 489 143 HOH HOH . F 5 HOH A 90 490 122 HOH HOH . F 5 HOH A 91 491 27 HOH HOH . F 5 HOH A 92 492 49 HOH HOH . F 5 HOH A 93 493 158 HOH HOH . F 5 HOH A 94 494 197 HOH HOH . F 5 HOH A 95 495 48 HOH HOH . F 5 HOH A 96 496 23 HOH HOH . F 5 HOH A 97 497 166 HOH HOH . F 5 HOH A 98 498 41 HOH HOH . F 5 HOH A 99 499 97 HOH HOH . F 5 HOH A 100 500 56 HOH HOH . F 5 HOH A 101 501 83 HOH HOH . F 5 HOH A 102 502 47 HOH HOH . F 5 HOH A 103 503 123 HOH HOH . F 5 HOH A 104 504 150 HOH HOH . F 5 HOH A 105 505 201 HOH HOH . F 5 HOH A 106 506 116 HOH HOH . F 5 HOH A 107 507 187 HOH HOH . F 5 HOH A 108 508 53 HOH HOH . F 5 HOH A 109 509 6 HOH HOH . F 5 HOH A 110 510 14 HOH HOH . F 5 HOH A 111 511 84 HOH HOH . F 5 HOH A 112 512 205 HOH HOH . F 5 HOH A 113 513 159 HOH HOH . F 5 HOH A 114 514 115 HOH HOH . F 5 HOH A 115 515 136 HOH HOH . F 5 HOH A 116 516 12 HOH HOH . F 5 HOH A 117 517 32 HOH HOH . F 5 HOH A 118 518 107 HOH HOH . F 5 HOH A 119 519 165 HOH HOH . F 5 HOH A 120 520 37 HOH HOH . F 5 HOH A 121 521 112 HOH HOH . F 5 HOH A 122 522 79 HOH HOH . F 5 HOH A 123 523 89 HOH HOH . F 5 HOH A 124 524 99 HOH HOH . F 5 HOH A 125 525 10 HOH HOH . F 5 HOH A 126 526 43 HOH HOH . F 5 HOH A 127 527 108 HOH HOH . F 5 HOH A 128 528 8 HOH HOH . F 5 HOH A 129 529 129 HOH HOH . F 5 HOH A 130 530 204 HOH HOH . F 5 HOH A 131 531 90 HOH HOH . F 5 HOH A 132 532 182 HOH HOH . F 5 HOH A 133 533 223 HOH HOH . F 5 HOH A 134 534 156 HOH HOH . F 5 HOH A 135 535 185 HOH HOH . F 5 HOH A 136 536 124 HOH HOH . F 5 HOH A 137 537 151 HOH HOH . F 5 HOH A 138 538 50 HOH HOH . F 5 HOH A 139 539 140 HOH HOH . F 5 HOH A 140 540 36 HOH HOH . F 5 HOH A 141 541 125 HOH HOH . F 5 HOH A 142 542 163 HOH HOH . F 5 HOH A 143 543 224 HOH HOH . F 5 HOH A 144 544 128 HOH HOH . F 5 HOH A 145 545 141 HOH HOH . F 5 HOH A 146 546 74 HOH HOH . F 5 HOH A 147 547 52 HOH HOH . F 5 HOH A 148 548 130 HOH HOH . F 5 HOH A 149 549 215 HOH HOH . F 5 HOH A 150 550 126 HOH HOH . F 5 HOH A 151 551 98 HOH HOH . F 5 HOH A 152 552 210 HOH HOH . F 5 HOH A 153 553 25 HOH HOH . F 5 HOH A 154 554 144 HOH HOH . F 5 HOH A 155 555 180 HOH HOH . F 5 HOH A 156 556 195 HOH HOH . F 5 HOH A 157 557 173 HOH HOH . F 5 HOH A 158 558 24 HOH HOH . F 5 HOH A 159 559 46 HOH HOH . F 5 HOH A 160 560 11 HOH HOH . F 5 HOH A 161 561 39 HOH HOH . F 5 HOH A 162 562 203 HOH HOH . F 5 HOH A 163 563 179 HOH HOH . F 5 HOH A 164 564 119 HOH HOH . F 5 HOH A 165 565 202 HOH HOH . F 5 HOH A 166 566 31 HOH HOH . F 5 HOH A 167 567 160 HOH HOH . F 5 HOH A 168 568 188 HOH HOH . F 5 HOH A 169 569 102 HOH HOH . F 5 HOH A 170 570 88 HOH HOH . F 5 HOH A 171 571 169 HOH HOH . F 5 HOH A 172 572 96 HOH HOH . F 5 HOH A 173 573 16 HOH HOH . F 5 HOH A 174 574 132 HOH HOH . F 5 HOH A 175 575 175 HOH HOH . F 5 HOH A 176 576 172 HOH HOH . F 5 HOH A 177 577 152 HOH HOH . F 5 HOH A 178 578 222 HOH HOH . F 5 HOH A 179 579 153 HOH HOH . F 5 HOH A 180 580 57 HOH HOH . F 5 HOH A 181 581 196 HOH HOH . F 5 HOH A 182 582 146 HOH HOH . F 5 HOH A 183 583 209 HOH HOH . F 5 HOH A 184 584 221 HOH HOH . F 5 HOH A 185 585 176 HOH HOH . F 5 HOH A 186 586 174 HOH HOH . F 5 HOH A 187 587 131 HOH HOH . F 5 HOH A 188 588 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 6QO . . . E 4 -37.763 12.761 -12.89 1 21.27 ? C1 6QO 304 A 1 HETATM 2 C C2 6QO . . . E 4 -37.712 14.098 -12.542 1 28.79 ? C2 6QO 304 A 1 HETATM 3 C C3 6QO . . . E 4 -37.365 15.096 -13.579 1 32.65 ? C3 6QO 304 A 1 HETATM 4 C C4 6QO . . . E 4 -37.885 16.502 -13.476 1 36.33 ? C4 6QO 304 A 1 HETATM 5 C C5 6QO . . . E 4 -37.016 17.575 -13.572 1 29.19 ? C5 6QO 304 A 1 HETATM 6 C C6 6QO . . . E 4 -37.553 18.85 -13.47 1 38.52 ? C6 6QO 304 A 1 HETATM 7 C C7 6QO . . . E 4 -38.912 19.025 -13.288 1 31.9 ? C7 6QO 304 A 1 HETATM 8 C C8 6QO . . . E 4 -39.701 17.889 -13.192 1 39.68 ? C8 6QO 304 A 1 HETATM 9 C C9 6QO . . . E 4 -41.16 17.994 -12.997 1 38.79 ? C9 6QO 304 A 1 HETATM 10 C C10 6QO . . . E 4 -41.7 18.621 -11.875 1 50.62 ? C10 6QO 304 A 1 HETATM 11 C C16 6QO . . . E 4 -38.257 13.606 -10.25 1 25.31 ? C16 6QO 304 A 1 HETATM 12 F F1 6QO . . . E 4 -38.605 11.393 -9.614 1 24.15 ? F1 6QO 304 A 1 HETATM 13 C C17 6QO . . . E 4 -38.313 12.28 -10.598 1 23.59 ? C17 6QO 304 A 1 HETATM 14 C C 6QO . . . E 4 -38.096 11.827 -11.903 1 24.71 ? C 6QO 304 A 1 HETATM 15 O O 6QO . . . E 4 -38.144 10.517 -12.264 1 21.63 ? O 6QO 304 A 1 HETATM 16 C C15 6QO . . . E 4 -37.945 14.503 -11.237 1 28.91 ? C15 6QO 304 A 1 HETATM 17 O O1 6QO . . . E 4 -36.644 14.747 -14.51 1 33.24 ? O1 6QO 304 A 1 HETATM 18 N N 6QO . . . E 4 -39.215 16.64 -13.298 1 33.31 ? N 6QO 304 A 1 HETATM 19 C C14 6QO . . . E 4 -42.001 17.477 -13.94 1 39.14 ? C14 6QO 304 A 1 HETATM 20 F F 6QO . . . E 4 -41.473 16.886 -15.017 1 41.53 ? F 6QO 304 A 1 HETATM 21 C C13 6QO . . . E 4 -43.374 17.554 -13.821 1 41.55 ? C13 6QO 304 A 1 HETATM 22 O O2 6QO . . . E 4 -44.154 17.029 -14.788 1 37.4 ? O2 6QO 304 A 1 HETATM 23 C C12 6QO . . . E 4 -43.931 18.175 -12.707 1 54.97 ? C12 6QO 304 A 1 HETATM 24 C C11 6QO . . . E 4 -43.082 18.711 -11.74 1 64.96 ? C11 6QO 304 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 24 #