data_5L8H # _model_server_result.job_id G2ZZQH8SJyWkR_Gs5of9zQ _model_server_result.datetime_utc '2025-08-31 09:16:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 5L8H # _exptl.entry_id 5L8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5L8H _cell.length_a 91.95 _cell.length_b 104.66 _cell.length_c 135.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 215 A CYS 222 1_555 A SG CYS 215 A CYS 222 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? covale ? covale1 A SG CYS 37 A CYS 44 1_555 B CB GVE 76 B GVE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? covale ? covale2 B C GLY 75 B GLY 75 1_555 B N GVE 76 B GVE 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 A SG CYS 175 A CYS 182 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc2 A SG CYS 178 A CYS 185 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc3 A SG CYS 222 A CYS 229 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc4 A SG CYS 225 A CYS 232 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5L8H _atom_sites.fract_transf_matrix[1][1] 0.010875 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00739 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1000 1000 ZN ZN . D 4 HOH A 1 1101 72 HOH HOH . D 4 HOH A 2 1102 81 HOH HOH . D 4 HOH A 3 1103 233 HOH HOH . D 4 HOH A 4 1104 103 HOH HOH . D 4 HOH A 5 1105 85 HOH HOH . D 4 HOH A 6 1106 48 HOH HOH . D 4 HOH A 7 1107 117 HOH HOH . D 4 HOH A 8 1108 54 HOH HOH . D 4 HOH A 9 1109 104 HOH HOH . D 4 HOH A 10 1110 241 HOH HOH . D 4 HOH A 11 1111 71 HOH HOH . D 4 HOH A 12 1112 6 HOH HOH . D 4 HOH A 13 1113 161 HOH HOH . D 4 HOH A 14 1114 59 HOH HOH . D 4 HOH A 15 1115 34 HOH HOH . D 4 HOH A 16 1116 51 HOH HOH . D 4 HOH A 17 1117 57 HOH HOH . D 4 HOH A 18 1118 1 HOH HOH . D 4 HOH A 19 1119 61 HOH HOH . D 4 HOH A 20 1120 141 HOH HOH . D 4 HOH A 21 1121 136 HOH HOH . D 4 HOH A 22 1122 120 HOH HOH . D 4 HOH A 23 1123 29 HOH HOH . D 4 HOH A 24 1124 224 HOH HOH . D 4 HOH A 25 1125 112 HOH HOH . D 4 HOH A 26 1126 238 HOH HOH . D 4 HOH A 27 1127 39 HOH HOH . D 4 HOH A 28 1128 7 HOH HOH . D 4 HOH A 29 1129 16 HOH HOH . D 4 HOH A 30 1130 69 HOH HOH . D 4 HOH A 31 1131 165 HOH HOH . D 4 HOH A 32 1132 246 HOH HOH . D 4 HOH A 33 1133 245 HOH HOH . D 4 HOH A 34 1134 80 HOH HOH . D 4 HOH A 35 1135 53 HOH HOH . D 4 HOH A 36 1136 45 HOH HOH . D 4 HOH A 37 1137 102 HOH HOH . D 4 HOH A 38 1138 222 HOH HOH . D 4 HOH A 39 1139 107 HOH HOH . D 4 HOH A 40 1140 178 HOH HOH . D 4 HOH A 41 1141 46 HOH HOH . D 4 HOH A 42 1142 36 HOH HOH . D 4 HOH A 43 1143 98 HOH HOH . D 4 HOH A 44 1144 32 HOH HOH . D 4 HOH A 45 1145 183 HOH HOH . D 4 HOH A 46 1146 125 HOH HOH . D 4 HOH A 47 1147 206 HOH HOH . D 4 HOH A 48 1148 231 HOH HOH . D 4 HOH A 49 1149 171 HOH HOH . D 4 HOH A 50 1150 155 HOH HOH . D 4 HOH A 51 1151 26 HOH HOH . D 4 HOH A 52 1152 223 HOH HOH . D 4 HOH A 53 1153 201 HOH HOH . D 4 HOH A 54 1154 174 HOH HOH . D 4 HOH A 55 1155 91 HOH HOH . D 4 HOH A 56 1156 115 HOH HOH . D 4 HOH A 57 1157 134 HOH HOH . D 4 HOH A 58 1158 234 HOH HOH . D 4 HOH A 59 1159 236 HOH HOH . D 4 HOH A 60 1160 87 HOH HOH . D 4 HOH A 61 1161 212 HOH HOH . D 4 HOH A 62 1162 77 HOH HOH . D 4 HOH A 63 1163 97 HOH HOH . D 4 HOH A 64 1164 21 HOH HOH . D 4 HOH A 65 1165 228 HOH HOH . D 4 HOH A 66 1166 131 HOH HOH . D 4 HOH A 67 1167 19 HOH HOH . D 4 HOH A 68 1168 35 HOH HOH . D 4 HOH A 69 1169 15 HOH HOH . D 4 HOH A 70 1170 129 HOH HOH . D 4 HOH A 71 1171 27 HOH HOH . D 4 HOH A 72 1172 82 HOH HOH . D 4 HOH A 73 1173 225 HOH HOH . D 4 HOH A 74 1174 143 HOH HOH . D 4 HOH A 75 1175 119 HOH HOH . D 4 HOH A 76 1176 184 HOH HOH . D 4 HOH A 77 1177 192 HOH HOH . D 4 HOH A 78 1178 24 HOH HOH . D 4 HOH A 79 1179 95 HOH HOH . D 4 HOH A 80 1180 86 HOH HOH . D 4 HOH A 81 1181 203 HOH HOH . D 4 HOH A 82 1182 193 HOH HOH . D 4 HOH A 83 1183 167 HOH HOH . D 4 HOH A 84 1184 122 HOH HOH . D 4 HOH A 85 1185 204 HOH HOH . D 4 HOH A 86 1186 150 HOH HOH . D 4 HOH A 87 1187 189 HOH HOH . D 4 HOH A 88 1188 75 HOH HOH . D 4 HOH A 89 1189 99 HOH HOH . D 4 HOH A 90 1190 130 HOH HOH . D 4 HOH A 91 1191 33 HOH HOH . D 4 HOH A 92 1192 249 HOH HOH . D 4 HOH A 93 1193 149 HOH HOH . D 4 HOH A 94 1194 41 HOH HOH . D 4 HOH A 95 1195 227 HOH HOH . D 4 HOH A 96 1196 43 HOH HOH . D 4 HOH A 97 1197 208 HOH HOH . D 4 HOH A 98 1198 8 HOH HOH . D 4 HOH A 99 1199 173 HOH HOH . D 4 HOH A 100 1200 94 HOH HOH . D 4 HOH A 101 1201 244 HOH HOH . D 4 HOH A 102 1202 18 HOH HOH . D 4 HOH A 103 1203 181 HOH HOH . D 4 HOH A 104 1204 84 HOH HOH . D 4 HOH A 105 1205 2 HOH HOH . D 4 HOH A 106 1206 62 HOH HOH . D 4 HOH A 107 1207 123 HOH HOH . D 4 HOH A 108 1208 42 HOH HOH . D 4 HOH A 109 1209 116 HOH HOH . D 4 HOH A 110 1210 13 HOH HOH . D 4 HOH A 111 1211 31 HOH HOH . D 4 HOH A 112 1212 142 HOH HOH . D 4 HOH A 113 1213 180 HOH HOH . D 4 HOH A 114 1214 251 HOH HOH . D 4 HOH A 115 1215 110 HOH HOH . D 4 HOH A 116 1216 211 HOH HOH . D 4 HOH A 117 1217 194 HOH HOH . D 4 HOH A 118 1218 126 HOH HOH . D 4 HOH A 119 1219 128 HOH HOH . D 4 HOH A 120 1220 10 HOH HOH . D 4 HOH A 121 1221 147 HOH HOH . D 4 HOH A 122 1222 114 HOH HOH . D 4 HOH A 123 1223 55 HOH HOH . D 4 HOH A 124 1224 198 HOH HOH . D 4 HOH A 125 1225 68 HOH HOH . D 4 HOH A 126 1226 135 HOH HOH . D 4 HOH A 127 1227 23 HOH HOH . D 4 HOH A 128 1228 89 HOH HOH . D 4 HOH A 129 1229 38 HOH HOH . D 4 HOH A 130 1230 12 HOH HOH . D 4 HOH A 131 1231 92 HOH HOH . D 4 HOH A 132 1232 138 HOH HOH . D 4 HOH A 133 1233 22 HOH HOH . D 4 HOH A 134 1234 17 HOH HOH . D 4 HOH A 135 1235 47 HOH HOH . D 4 HOH A 136 1236 140 HOH HOH . D 4 HOH A 137 1237 108 HOH HOH . D 4 HOH A 138 1238 25 HOH HOH . D 4 HOH A 139 1239 139 HOH HOH . D 4 HOH A 140 1240 177 HOH HOH . D 4 HOH A 141 1241 207 HOH HOH . D 4 HOH A 142 1242 170 HOH HOH . D 4 HOH A 143 1243 74 HOH HOH . D 4 HOH A 144 1244 109 HOH HOH . D 4 HOH A 145 1245 232 HOH HOH . D 4 HOH A 146 1246 154 HOH HOH . D 4 HOH A 147 1247 166 HOH HOH . D 4 HOH A 148 1248 118 HOH HOH . D 4 HOH A 149 1249 121 HOH HOH . D 4 HOH A 150 1250 14 HOH HOH . D 4 HOH A 151 1251 160 HOH HOH . D 4 HOH A 152 1252 205 HOH HOH . D 4 HOH A 153 1253 101 HOH HOH . D 4 HOH A 154 1254 65 HOH HOH . D 4 HOH A 155 1255 250 HOH HOH . D 4 HOH A 156 1256 195 HOH HOH . D 4 HOH A 157 1257 176 HOH HOH . D 4 HOH A 158 1258 230 HOH HOH . D 4 HOH A 159 1259 215 HOH HOH . D 4 HOH A 160 1260 148 HOH HOH . D 4 HOH A 161 1261 151 HOH HOH . D 4 HOH A 162 1262 220 HOH HOH . D 4 HOH A 163 1263 144 HOH HOH . D 4 HOH A 164 1264 247 HOH HOH . D 4 HOH A 165 1265 179 HOH HOH . D 4 HOH A 166 1266 156 HOH HOH . D 4 HOH A 167 1267 186 HOH HOH . D 4 HOH A 168 1268 146 HOH HOH . D 4 HOH A 169 1269 52 HOH HOH . D 4 HOH A 170 1270 197 HOH HOH . D 4 HOH A 171 1271 243 HOH HOH . D 4 HOH A 172 1272 216 HOH HOH . D 4 HOH A 173 1273 188 HOH HOH . D 4 HOH A 174 1274 106 HOH HOH . D 4 HOH A 175 1275 219 HOH HOH . D 4 HOH A 176 1276 229 HOH HOH . D 4 HOH A 177 1277 162 HOH HOH . D 4 HOH A 178 1278 202 HOH HOH . D 4 HOH A 179 1279 79 HOH HOH . D 4 HOH A 180 1280 209 HOH HOH . D 4 HOH A 181 1281 67 HOH HOH . D 4 HOH A 182 1282 93 HOH HOH . D 4 HOH A 183 1283 248 HOH HOH . D 4 HOH A 184 1284 240 HOH HOH . D 4 HOH A 185 1285 187 HOH HOH . D 4 HOH A 186 1286 221 HOH HOH . D 4 HOH A 187 1287 210 HOH HOH . D 4 HOH A 188 1288 217 HOH HOH . D 4 HOH A 189 1289 213 HOH HOH . D 4 HOH A 190 1290 158 HOH HOH . D 4 HOH A 191 1291 199 HOH HOH . D 4 HOH A 192 1292 196 HOH HOH . E 4 HOH B 1 101 88 HOH HOH . E 4 HOH B 2 102 111 HOH HOH . E 4 HOH B 3 103 96 HOH HOH . E 4 HOH B 4 104 76 HOH HOH . E 4 HOH B 5 105 4 HOH HOH . E 4 HOH B 6 106 105 HOH HOH . E 4 HOH B 7 107 239 HOH HOH . E 4 HOH B 8 108 64 HOH HOH . E 4 HOH B 9 109 5 HOH HOH . E 4 HOH B 10 110 70 HOH HOH . E 4 HOH B 11 111 168 HOH HOH . E 4 HOH B 12 112 30 HOH HOH . E 4 HOH B 13 113 63 HOH HOH . E 4 HOH B 14 114 44 HOH HOH . E 4 HOH B 15 115 28 HOH HOH . E 4 HOH B 16 116 145 HOH HOH . E 4 HOH B 17 117 40 HOH HOH . E 4 HOH B 18 118 49 HOH HOH . E 4 HOH B 19 119 133 HOH HOH . E 4 HOH B 20 120 73 HOH HOH . E 4 HOH B 21 121 50 HOH HOH . E 4 HOH B 22 122 163 HOH HOH . E 4 HOH B 23 123 3 HOH HOH . E 4 HOH B 24 124 58 HOH HOH . E 4 HOH B 25 125 66 HOH HOH . E 4 HOH B 26 126 9 HOH HOH . E 4 HOH B 27 127 185 HOH HOH . E 4 HOH B 28 128 169 HOH HOH . E 4 HOH B 29 129 11 HOH HOH . E 4 HOH B 30 130 172 HOH HOH . E 4 HOH B 31 131 90 HOH HOH . E 4 HOH B 32 132 132 HOH HOH . E 4 HOH B 33 133 237 HOH HOH . E 4 HOH B 34 134 37 HOH HOH . E 4 HOH B 35 135 226 HOH HOH . E 4 HOH B 36 136 113 HOH HOH . E 4 HOH B 37 137 235 HOH HOH . E 4 HOH B 38 138 56 HOH HOH . E 4 HOH B 39 139 100 HOH HOH . E 4 HOH B 40 140 159 HOH HOH . E 4 HOH B 41 141 214 HOH HOH . E 4 HOH B 42 142 60 HOH HOH . E 4 HOH B 43 143 20 HOH HOH . E 4 HOH B 44 144 164 HOH HOH . E 4 HOH B 45 145 124 HOH HOH . E 4 HOH B 46 146 218 HOH HOH . E 4 HOH B 47 147 157 HOH HOH . E 4 HOH B 48 148 83 HOH HOH . E 4 HOH B 49 149 127 HOH HOH . E 4 HOH B 50 150 153 HOH HOH . E 4 HOH B 51 151 137 HOH HOH . E 4 HOH B 52 152 152 HOH HOH . E 4 HOH B 53 153 191 HOH HOH . E 4 HOH B 54 154 78 HOH HOH . E 4 HOH B 55 155 175 HOH HOH . E 4 HOH B 56 156 190 HOH HOH . E 4 HOH B 57 157 182 HOH HOH . E 4 HOH B 58 158 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 10.905 _atom_site.Cartn_y 15.676 _atom_site.Cartn_z 42.617 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1000 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #