data_5L8I # _model_server_result.job_id R9t0QlG8ak1wIJ_Cv32k4A _model_server_result.datetime_utc '2024-11-22 22:04:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l8i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5L8I # _exptl.entry_id 5L8I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.55 _cell.angle_gamma 90 _cell.entry_id 5L8I _cell.length_a 46.952 _cell.length_b 64.114 _cell.length_c 58.765 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,H 1 1 B,E,F,G,I 2 1 C,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 275 n n C1 C2 PEG sing 276 n n C1 H11 PEG sing 277 n n C1 H12 PEG sing 278 n n O1 HO1 PEG sing 279 n n C2 O2 PEG sing 280 n n C2 H21 PEG sing 281 n n C2 H22 PEG sing 282 n n O2 C3 PEG sing 283 n n C3 C4 PEG sing 284 n n C3 H31 PEG sing 285 n n C3 H32 PEG sing 286 n n C4 O4 PEG sing 287 n n C4 H41 PEG sing 288 n n C4 H42 PEG sing 289 n n O4 HO4 PEG sing 290 n n # _atom_sites.entry_id 5L8I _atom_sites.fract_transf_matrix[1][1] 0.021298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001694 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017071 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PGE A 1 201 1 PGE 123 . E 3 P33 B 1 201 1 P33 P33 . F 4 PEG B 1 202 1 PEG PEG . G 5 PG4 B 1 203 1 PG4 PG4 . H 6 HOH A 1 301 47 HOH HOH . H 6 HOH A 2 302 58 HOH HOH . H 6 HOH A 3 303 43 HOH HOH . H 6 HOH A 4 304 18 HOH HOH . H 6 HOH A 5 305 48 HOH HOH . H 6 HOH A 6 306 28 HOH HOH . H 6 HOH A 7 307 13 HOH HOH . H 6 HOH A 8 308 2 HOH HOH . H 6 HOH A 9 309 21 HOH HOH . H 6 HOH A 10 310 30 HOH HOH . H 6 HOH A 11 311 16 HOH HOH . H 6 HOH A 12 312 33 HOH HOH . H 6 HOH A 13 313 14 HOH HOH . H 6 HOH A 14 314 23 HOH HOH . H 6 HOH A 15 315 25 HOH HOH . H 6 HOH A 16 316 31 HOH HOH . H 6 HOH A 17 317 45 HOH HOH . H 6 HOH A 18 318 60 HOH HOH . H 6 HOH A 19 319 17 HOH HOH . H 6 HOH A 20 320 26 HOH HOH . H 6 HOH A 21 321 6 HOH HOH . H 6 HOH A 22 322 57 HOH HOH . H 6 HOH A 23 323 19 HOH HOH . I 6 HOH B 1 301 36 HOH HOH . I 6 HOH B 2 302 44 HOH HOH . I 6 HOH B 3 303 38 HOH HOH . I 6 HOH B 4 304 5 HOH HOH . I 6 HOH B 5 305 55 HOH HOH . I 6 HOH B 6 306 9 HOH HOH . I 6 HOH B 7 307 42 HOH HOH . I 6 HOH B 8 308 20 HOH HOH . I 6 HOH B 9 309 15 HOH HOH . I 6 HOH B 10 310 10 HOH HOH . I 6 HOH B 11 311 34 HOH HOH . I 6 HOH B 12 312 46 HOH HOH . I 6 HOH B 13 313 37 HOH HOH . I 6 HOH B 14 314 41 HOH HOH . I 6 HOH B 15 315 7 HOH HOH . I 6 HOH B 16 316 61 HOH HOH . I 6 HOH B 17 317 40 HOH HOH . I 6 HOH B 18 318 11 HOH HOH . I 6 HOH B 19 319 32 HOH HOH . I 6 HOH B 20 320 39 HOH HOH . I 6 HOH B 21 321 50 HOH HOH . I 6 HOH B 22 322 3 HOH HOH . I 6 HOH B 23 323 8 HOH HOH . I 6 HOH B 24 324 56 HOH HOH . I 6 HOH B 25 325 22 HOH HOH . I 6 HOH B 26 326 4 HOH HOH . I 6 HOH B 27 327 27 HOH HOH . J 6 HOH C 1 201 12 HOH HOH . J 6 HOH C 2 202 51 HOH HOH . J 6 HOH C 3 203 53 HOH HOH . J 6 HOH C 4 204 52 HOH HOH . J 6 HOH C 5 205 54 HOH HOH . J 6 HOH C 6 206 49 HOH HOH . J 6 HOH C 7 207 29 HOH HOH . J 6 HOH C 8 208 59 HOH HOH . J 6 HOH C 9 209 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 4 60.759 0.701 81.167 1 50.76 ? C1 PEG 202 B 1 HETATM 2 O O1 PEG . . . F 4 60.617 0.183 82.498 1 51.55 ? O1 PEG 202 B 1 HETATM 3 C C2 PEG . . . F 4 61.274 2.137 81.195 1 50.78 ? C2 PEG 202 B 1 HETATM 4 O O2 PEG . . . F 4 60.291 3.055 80.696 1 50.65 ? O2 PEG 202 B 1 HETATM 5 C C3 PEG . . . F 4 60.372 4.334 81.337 1 50.13 ? C3 PEG 202 B 1 HETATM 6 C C4 PEG . . . F 4 59.63 5.427 80.57 1 50.38 ? C4 PEG 202 B 1 HETATM 7 O O4 PEG . . . F 4 58.289 5.582 81.057 1 53.36 ? O4 PEG 202 B 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #