data_5L8N
#
_model_server_result.job_id            pNxlUHhK6cLonsVhpsklLg 
_model_server_result.datetime_utc      '2024-11-06 18:44:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5l8n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2003}' 
#
_entry.id    5L8N 
#
_exptl.entry_id    5L8N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              326.383 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.27 
_cell.angle_gamma         90 
_cell.entry_id            5L8N 
_cell.length_a            47.25 
_cell.length_b            64.43 
_cell.length_c            59.02 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5L8N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,K 1 1 
B,F,G,H,L 2 1 
C,I,J,M 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H30 O8' 
_chem_comp.formula_weight    326.383 
_chem_comp.id                P33 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'HEPTAETHYLENE GLYCOL;PEG330' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O22 C21 P33 sing 248 n n 
O22 H22 P33 sing 249 n n 
C21 C20 P33 sing 250 n n 
C21 H211 P33 sing 251 n n 
C21 H212 P33 sing 252 n n 
C20 O19 P33 sing 253 n n 
C20 H201 P33 sing 254 n n 
C20 H202 P33 sing 255 n n 
O19 C18 P33 sing 256 n n 
C18 C17 P33 sing 257 n n 
C18 H181 P33 sing 258 n n 
C18 H182 P33 sing 259 n n 
C17 O16 P33 sing 260 n n 
C17 H171 P33 sing 261 n n 
C17 H172 P33 sing 262 n n 
O16 C15 P33 sing 263 n n 
C15 C14 P33 sing 264 n n 
C15 H151 P33 sing 265 n n 
C15 H152 P33 sing 266 n n 
C14 O13 P33 sing 267 n n 
C14 H141 P33 sing 268 n n 
C14 H142 P33 sing 269 n n 
O13 C12 P33 sing 270 n n 
C12 C11 P33 sing 271 n n 
C12 H121 P33 sing 272 n n 
C12 H122 P33 sing 273 n n 
C11 O10 P33 sing 274 n n 
C11 H111 P33 sing 275 n n 
C11 H112 P33 sing 276 n n 
O10 C9 P33 sing 277 n n 
C9 C8 P33 sing 278 n n 
C9 H91 P33 sing 279 n n 
C9 H92 P33 sing 280 n n 
C8 O7 P33 sing 281 n n 
C8 H81 P33 sing 282 n n 
C8 H82 P33 sing 283 n n 
O7 C6 P33 sing 284 n n 
C6 C5 P33 sing 285 n n 
C6 H61 P33 sing 286 n n 
C6 H62 P33 sing 287 n n 
C5 O4 P33 sing 288 n n 
C5 H51 P33 sing 289 n n 
C5 H52 P33 sing 290 n n 
O4 C3 P33 sing 291 n n 
C3 C2 P33 sing 292 n n 
C3 H31 P33 sing 293 n n 
C3 H32 P33 sing 294 n n 
C2 O1 P33 sing 295 n n 
C2 H21 P33 sing 296 n n 
C2 H22A P33 sing 297 n n 
O1 HO1 P33 sing 298 n n 
#
_atom_sites.entry_id                     5L8N 
_atom_sites.fract_transf_matrix[1][1]    0.021164 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00158 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015521 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016991 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 6RQ A 1 1001 1001 6RQ 882 . 
E 3 PEG A 1 1002 2001 PEG PEG . 
F 3 PEG B 1 2001 2001 PEG PEG . 
G 3 PEG B 1 2002 2002 PEG PEG . 
H 4 P33 B 1 2003 2003 P33 P33 . 
I 2 6RQ C 1 1001 1001 6RQ 882 . 
J 3 PEG C 1 1002 2001 PEG PEG . 
K 5 HOH A 1 1101 20 HOH HOH . 
K 5 HOH A 2 1102 13 HOH HOH . 
K 5 HOH A 3 1103 38 HOH HOH . 
K 5 HOH A 4 1104 22 HOH HOH . 
K 5 HOH A 5 1105 44 HOH HOH . 
K 5 HOH A 6 1106 9 HOH HOH . 
K 5 HOH A 7 1107 23 HOH HOH . 
K 5 HOH A 8 1108 41 HOH HOH . 
K 5 HOH A 9 1109 11 HOH HOH . 
K 5 HOH A 10 1110 37 HOH HOH . 
K 5 HOH A 11 1111 36 HOH HOH . 
K 5 HOH A 12 1112 5 HOH HOH . 
K 5 HOH A 13 1113 10 HOH HOH . 
K 5 HOH A 14 1114 18 HOH HOH . 
K 5 HOH A 15 1115 16 HOH HOH . 
K 5 HOH A 16 1116 17 HOH HOH . 
L 5 HOH B 1 2101 33 HOH HOH . 
L 5 HOH B 2 2102 19 HOH HOH . 
L 5 HOH B 3 2103 2 HOH HOH . 
L 5 HOH B 4 2104 30 HOH HOH . 
L 5 HOH B 5 2105 25 HOH HOH . 
L 5 HOH B 6 2106 24 HOH HOH . 
L 5 HOH B 7 2107 31 HOH HOH . 
L 5 HOH B 8 2108 7 HOH HOH . 
L 5 HOH B 9 2109 39 HOH HOH . 
L 5 HOH B 10 2110 28 HOH HOH . 
L 5 HOH B 11 2111 4 HOH HOH . 
L 5 HOH B 12 2112 15 HOH HOH . 
L 5 HOH B 13 2113 6 HOH HOH . 
L 5 HOH B 14 2114 26 HOH HOH . 
L 5 HOH B 15 2115 27 HOH HOH . 
L 5 HOH B 16 2116 45 HOH HOH . 
L 5 HOH B 17 2117 14 HOH HOH . 
L 5 HOH B 18 2118 42 HOH HOH . 
L 5 HOH B 19 2119 34 HOH HOH . 
L 5 HOH B 20 2120 1 HOH HOH . 
L 5 HOH B 21 2121 43 HOH HOH . 
L 5 HOH B 22 2122 3 HOH HOH . 
L 5 HOH B 23 2123 21 HOH HOH . 
L 5 HOH B 24 2124 40 HOH HOH . 
L 5 HOH B 25 2125 12 HOH HOH . 
L 5 HOH B 26 2126 35 HOH HOH . 
M 5 HOH C 1 1101 29 HOH HOH . 
M 5 HOH C 2 1102 32 HOH HOH . 
M 5 HOH C 3 1103 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O22 P33 . . . H 4 60.129 -3.745 81.242 1 76.25 ? O22 P33 2003 B 1 
HETATM 2 C C21 P33 . . . H 4 61.446 -4.304 81.167 1 74.86 ? C21 P33 2003 B 1 
HETATM 3 C C20 P33 . . . H 4 62.355 -3.387 80.356 1 74.08 ? C20 P33 2003 B 1 
HETATM 4 O O19 P33 . . . H 4 63.599 -3.22 81.041 1 74.45 ? O19 P33 2003 B 1 
HETATM 5 C C18 P33 . . . H 4 64.121 -1.891 80.974 1 72.61 ? C18 P33 2003 B 1 
HETATM 6 C C17 P33 . . . H 4 65.493 -1.836 81.641 1 70.37 ? C17 P33 2003 B 1 
HETATM 7 O O16 P33 . . . H 4 66.33 -0.895 80.962 1 68.69 ? O16 P33 2003 B 1 
HETATM 8 C C15 P33 . . . H 4 66.118 0.475 81.324 1 66.75 ? C15 P33 2003 B 1 
HETATM 9 C C14 P33 . . . H 4 66.184 1.359 80.08 1 65.61 ? C14 P33 2003 B 1 
HETATM 10 O O13 P33 . . . H 4 64.87 1.783 79.709 1 64.26 ? O13 P33 2003 B 1 
HETATM 11 C C12 P33 . . . H 4 64.808 2.433 78.439 1 62.75 ? C12 P33 2003 B 1 
HETATM 12 C C11 P33 . . . H 4 64.518 1.412 77.343 1 62.58 ? C11 P33 2003 B 1 
HETATM 13 O O10 P33 . . . H 4 64.33 2.084 76.095 1 61.12 ? O10 P33 2003 B 1 
HETATM 14 C C9 P33 . . . H 4 64.905 1.398 74.978 1 59.18 ? C9 P33 2003 B 1 
HETATM 15 C C8 P33 . . . H 4 64.477 2.069 73.674 1 58.18 ? C8 P33 2003 B 1 
HETATM 16 O O7 P33 . . . H 4 65.617 2.45 72.904 1 56.53 ? O7 P33 2003 B 1 
HETATM 17 C C6 P33 . . . H 4 65.302 3.309 71.805 1 56.9 ? C6 P33 2003 B 1 
HETATM 18 C C5 P33 . . . H 4 65.391 4.776 72.213 1 57.6 ? C5 P33 2003 B 1 
HETATM 19 O O4 P33 . . . H 4 66.739 5.235 72.081 1 57.65 ? O4 P33 2003 B 1 
HETATM 20 C C3 P33 . . . H 4 66.904 6.633 72.339 1 57.93 ? C3 P33 2003 B 1 
HETATM 21 C C2 P33 . . . H 4 66.91 6.907 73.84 1 58.86 ? C2 P33 2003 B 1 
HETATM 22 O O1 P33 . . . H 4 67.825 7.966 74.152 1 58.1 ? O1 P33 2003 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           22 
#