data_5L8O
#
_model_server_result.job_id            Mvan_YMAqtFC0IkDMgHLZg 
_model_server_result.datetime_utc      '2024-11-13 01:21:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5l8o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1002}' 
#
_entry.id    5L8O 
#
_exptl.entry_id    5L8O 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.02 
_cell.angle_gamma         90 
_cell.entry_id            5L8O 
_cell.length_a            46.86 
_cell.length_b            64.72 
_cell.length_c            59.33 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5L8O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G 1 1 
B,E,F,H 2 1 
C,I 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 F N N 
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_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 296 n n 
C1 C2 PEG sing 297 n n 
C1 H11 PEG sing 298 n n 
C1 H12 PEG sing 299 n n 
O1 HO1 PEG sing 300 n n 
C2 O2 PEG sing 301 n n 
C2 H21 PEG sing 302 n n 
C2 H22 PEG sing 303 n n 
O2 C3 PEG sing 304 n n 
C3 C4 PEG sing 305 n n 
C3 H31 PEG sing 306 n n 
C3 H32 PEG sing 307 n n 
C4 O4 PEG sing 308 n n 
C4 H41 PEG sing 309 n n 
C4 H42 PEG sing 310 n n 
O4 HO4 PEG sing 311 n n 
#
_atom_sites.entry_id                     5L8O 
_atom_sites.fract_transf_matrix[1][1]    0.02134 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.0015 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015451 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016896 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PEG A 1 2001 2001 PEG PEG . 
E 3 CHD B 1 1001 1001 CHD CHD . 
F 2 PEG B 1 1002 2001 PEG PEG . 
G 4 HOH A 1 2101 9 HOH HOH . 
G 4 HOH A 2 2102 17 HOH HOH . 
G 4 HOH A 3 2103 30 HOH HOH . 
G 4 HOH A 4 2104 7 HOH HOH . 
G 4 HOH A 5 2105 10 HOH HOH . 
G 4 HOH A 6 2106 31 HOH HOH . 
G 4 HOH A 7 2107 47 HOH HOH . 
G 4 HOH A 8 2108 35 HOH HOH . 
G 4 HOH A 9 2109 45 HOH HOH . 
G 4 HOH A 10 2110 48 HOH HOH . 
G 4 HOH A 11 2111 46 HOH HOH . 
G 4 HOH A 12 2112 39 HOH HOH . 
G 4 HOH A 13 2113 18 HOH HOH . 
G 4 HOH A 14 2114 44 HOH HOH . 
G 4 HOH A 15 2115 33 HOH HOH . 
G 4 HOH A 16 2116 36 HOH HOH . 
G 4 HOH A 17 2117 32 HOH HOH . 
H 4 HOH B 1 1101 1 HOH HOH . 
H 4 HOH B 2 1102 13 HOH HOH . 
H 4 HOH B 3 1103 50 HOH HOH . 
H 4 HOH B 4 1104 2 HOH HOH . 
H 4 HOH B 5 1105 5 HOH HOH . 
H 4 HOH B 6 1106 25 HOH HOH . 
H 4 HOH B 7 1107 23 HOH HOH . 
H 4 HOH B 8 1108 26 HOH HOH . 
H 4 HOH B 9 1109 43 HOH HOH . 
H 4 HOH B 10 1110 52 HOH HOH . 
H 4 HOH B 11 1111 28 HOH HOH . 
H 4 HOH B 12 1112 24 HOH HOH . 
H 4 HOH B 13 1113 14 HOH HOH . 
H 4 HOH B 14 1114 4 HOH HOH . 
H 4 HOH B 15 1115 12 HOH HOH . 
H 4 HOH B 16 1116 49 HOH HOH . 
H 4 HOH B 17 1117 11 HOH HOH . 
H 4 HOH B 18 1118 6 HOH HOH . 
H 4 HOH B 19 1119 51 HOH HOH . 
H 4 HOH B 20 1120 3 HOH HOH . 
H 4 HOH B 21 1121 40 HOH HOH . 
H 4 HOH B 22 1122 37 HOH HOH . 
I 4 HOH C 1 201 34 HOH HOH . 
I 4 HOH C 2 202 15 HOH HOH . 
I 4 HOH C 3 203 20 HOH HOH . 
I 4 HOH C 4 204 42 HOH HOH . 
I 4 HOH C 5 205 16 HOH HOH . 
I 4 HOH C 6 206 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . F 2 58.355 6.137 81.812 1 62.83 ? C1 PEG 1002 B 1 
HETATM 2 O O1 PEG . . . F 2 58.158 5.867 83.205 1 63.64 ? O1 PEG 1002 B 1 
HETATM 3 C C2 PEG . . . F 2 59.763 5.719 81.398 1 62.18 ? C2 PEG 1002 B 1 
HETATM 4 O O2 PEG . . . F 2 59.944 4.324 81.655 1 61.23 ? O2 PEG 1002 B 1 
HETATM 5 C C3 PEG . . . F 2 61.309 3.906 81.584 1 59.81 ? C3 PEG 1002 B 1 
HETATM 6 C C4 PEG . . . F 2 61.364 2.411 81.291 1 58.46 ? C4 PEG 1002 B 1 
HETATM 7 O O4 PEG . . . F 2 61.611 1.669 82.491 1 58.63 ? O4 PEG 1002 B 1 
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_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           7 
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