data_5L9F # _model_server_result.job_id iZKakq_aP7m7VrGajwGttw _model_server_result.datetime_utc '2024-11-25 02:53:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5l9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 5L9F # _exptl.entry_id 5L9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5L9F _cell.length_a 49.215 _cell.length_b 91.088 _cell.length_c 117.865 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5L9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 243 A GLN 240 1_555 A N CME 244 A CME 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CME 244 A CME 241 1_555 A N TRP 245 A TRP 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C GLN 243 B GLN 240 1_555 B N CME 244 B CME 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C CME 244 B CME 241 1_555 B N TRP 245 B TRP 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 C NA NA . A NA 301 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.798 ? metalc ? metalc2 E NA NA . B NA 301 1_555 H O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 311 n n S O2 SO4 doub 312 n n S O3 SO4 sing 313 n n S O4 SO4 sing 314 n n # _atom_sites.entry_id 5L9F _atom_sites.fract_transf_matrix[1][1] 0.020319 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008484 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 301 1 NA NA . D 3 SO4 A 1 302 1 SO4 SO4 . E 2 NA B 1 301 2 NA NA . F 3 SO4 B 1 302 2 SO4 SO4 . G 4 HOH A 1 401 18 HOH HOH . G 4 HOH A 2 402 32 HOH HOH . G 4 HOH A 3 403 22 HOH HOH . G 4 HOH A 4 404 38 HOH HOH . G 4 HOH A 5 405 40 HOH HOH . G 4 HOH A 6 406 67 HOH HOH . G 4 HOH A 7 407 2 HOH HOH . G 4 HOH A 8 408 10 HOH HOH . G 4 HOH A 9 409 25 HOH HOH . G 4 HOH A 10 410 46 HOH HOH . G 4 HOH A 11 411 8 HOH HOH . G 4 HOH A 12 412 6 HOH HOH . G 4 HOH A 13 413 15 HOH HOH . G 4 HOH A 14 414 49 HOH HOH . G 4 HOH A 15 415 76 HOH HOH . G 4 HOH A 16 416 48 HOH HOH . G 4 HOH A 17 417 74 HOH HOH . G 4 HOH A 18 418 56 HOH HOH . G 4 HOH A 19 419 71 HOH HOH . G 4 HOH A 20 420 73 HOH HOH . G 4 HOH A 21 421 58 HOH HOH . H 4 HOH B 1 401 43 HOH HOH . H 4 HOH B 2 402 54 HOH HOH . H 4 HOH B 3 403 33 HOH HOH . H 4 HOH B 4 404 53 HOH HOH . H 4 HOH B 5 405 3 HOH HOH . H 4 HOH B 6 406 42 HOH HOH . H 4 HOH B 7 407 27 HOH HOH . H 4 HOH B 8 408 20 HOH HOH . H 4 HOH B 9 409 7 HOH HOH . H 4 HOH B 10 410 17 HOH HOH . H 4 HOH B 11 411 28 HOH HOH . H 4 HOH B 12 412 9 HOH HOH . H 4 HOH B 13 413 16 HOH HOH . H 4 HOH B 14 414 30 HOH HOH . H 4 HOH B 15 415 31 HOH HOH . H 4 HOH B 16 416 12 HOH HOH . H 4 HOH B 17 417 26 HOH HOH . H 4 HOH B 18 418 51 HOH HOH . H 4 HOH B 19 419 44 HOH HOH . H 4 HOH B 20 420 69 HOH HOH . H 4 HOH B 21 421 21 HOH HOH . H 4 HOH B 22 422 63 HOH HOH . H 4 HOH B 23 423 59 HOH HOH . H 4 HOH B 24 424 23 HOH HOH . H 4 HOH B 25 425 60 HOH HOH . H 4 HOH B 26 426 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 -11.196 37.435 54.368 1 63.76 ? S SO4 302 B 1 HETATM 2 O O1 SO4 . . . F 3 -10.825 37.982 53.03 1 39.01 ? O1 SO4 302 B 1 HETATM 3 O O2 SO4 . . . F 3 -12.663 37.476 54.511 1 51.52 ? O2 SO4 302 B 1 HETATM 4 O O3 SO4 . . . F 3 -10.667 36.065 54.532 1 41.22 ? O3 SO4 302 B 1 HETATM 5 O O4 SO4 . . . F 3 -10.656 38.23 55.472 1 41.42 ? O4 SO4 302 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #