data_5LA6 # _model_server_result.job_id 30-d7aPV3r3eLHRDBFNOcw _model_server_result.datetime_utc '2024-11-15 06:37:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5la6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 5LA6 # _exptl.entry_id 5LA6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5LA6 _cell.length_a 105.68 _cell.length_b 157.2 _cell.length_c 180.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LA6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C SG CYS 316 C CYS 316 1_555 Q C03 X3H . C X3H 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.843 ? metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc10 H MG MG . A MG 502 1_555 T O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc11 H MG MG . A MG 502 1_555 T O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc12 H MG MG . A MG 502 1_555 T O HOH . A HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc13 H MG MG . A MG 502 1_555 T O HOH . A HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc14 J CA CA . A CA 504 1_555 T O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc15 J CA CA . A CA 504 1_555 T O HOH . A HOH 664 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc16 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc17 B OE2 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc18 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc19 L MG MG . B MG 502 1_555 U O HOH . B HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc20 L MG MG . B MG 502 1_555 U O HOH . B HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc21 L MG MG . B MG 502 1_555 U O HOH . B HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc22 M CA CA . B CA 503 1_555 U O HOH . B HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc23 M CA CA . B CA 503 1_555 V O HOH . C HOH 629 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc24 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc25 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc26 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc27 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc28 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc29 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc30 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc31 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc32 N O1B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc33 O MG MG . C MG 502 1_555 V O HOH . C HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc34 O MG MG . C MG 502 1_555 V O HOH . C HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc35 O MG MG . C MG 502 1_555 V O HOH . C HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc36 O MG MG . C MG 502 1_555 V O HOH . C HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc37 P CA CA . C CA 503 1_555 V O HOH . C HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5LA6 _atom_sites.fract_transf_matrix[1][1] 0.009463 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 503 CA CA . Q 9 X3H C 1 504 504 X3H PT9 . R 8 GDP D 1 501 501 GDP GDP . S 10 ACP F 1 501 501 ACP ACP . T 11 HOH A 1 601 601 HOH HOH . T 11 HOH A 2 602 602 HOH HOH . T 11 HOH A 3 603 603 HOH HOH . T 11 HOH A 4 604 604 HOH HOH . T 11 HOH A 5 605 605 HOH HOH . T 11 HOH A 6 606 606 HOH HOH . T 11 HOH A 7 607 607 HOH HOH . T 11 HOH A 8 608 608 HOH HOH . T 11 HOH A 9 609 609 HOH HOH . T 11 HOH A 10 610 610 HOH HOH . T 11 HOH A 11 611 611 HOH HOH . T 11 HOH A 12 612 612 HOH HOH . T 11 HOH A 13 613 613 HOH HOH . T 11 HOH A 14 614 614 HOH HOH . T 11 HOH A 15 615 615 HOH HOH . T 11 HOH A 16 616 616 HOH HOH . T 11 HOH A 17 617 617 HOH HOH . T 11 HOH A 18 618 618 HOH HOH . T 11 HOH A 19 619 619 HOH HOH . T 11 HOH A 20 620 620 HOH HOH . T 11 HOH A 21 621 621 HOH HOH . T 11 HOH A 22 622 622 HOH HOH . T 11 HOH A 23 623 623 HOH HOH . T 11 HOH A 24 624 624 HOH HOH . T 11 HOH A 25 625 625 HOH HOH . T 11 HOH A 26 626 626 HOH HOH . T 11 HOH A 27 627 627 HOH HOH . T 11 HOH A 28 628 628 HOH HOH . T 11 HOH A 29 629 629 HOH HOH . T 11 HOH A 30 630 630 HOH HOH . T 11 HOH A 31 631 631 HOH HOH . T 11 HOH A 32 632 632 HOH HOH . T 11 HOH A 33 633 633 HOH HOH . T 11 HOH A 34 634 634 HOH HOH . T 11 HOH A 35 635 635 HOH HOH . T 11 HOH A 36 636 636 HOH HOH . T 11 HOH A 37 637 637 HOH HOH . T 11 HOH A 38 638 638 HOH HOH . T 11 HOH A 39 639 639 HOH HOH . T 11 HOH A 40 640 640 HOH HOH . T 11 HOH A 41 641 641 HOH HOH . T 11 HOH A 42 642 642 HOH HOH . T 11 HOH A 43 643 643 HOH HOH . T 11 HOH A 44 644 644 HOH HOH . T 11 HOH A 45 645 645 HOH HOH . T 11 HOH A 46 646 646 HOH HOH . T 11 HOH A 47 647 647 HOH HOH . T 11 HOH A 48 648 648 HOH HOH . T 11 HOH A 49 649 649 HOH HOH . T 11 HOH A 50 650 650 HOH HOH . T 11 HOH A 51 651 651 HOH HOH . T 11 HOH A 52 652 652 HOH HOH . T 11 HOH A 53 653 653 HOH HOH . T 11 HOH A 54 654 654 HOH HOH . T 11 HOH A 55 655 655 HOH HOH . T 11 HOH A 56 656 656 HOH HOH . T 11 HOH A 57 657 657 HOH HOH . T 11 HOH A 58 658 658 HOH HOH . T 11 HOH A 59 659 659 HOH HOH . T 11 HOH A 60 660 660 HOH HOH . T 11 HOH A 61 661 661 HOH HOH . T 11 HOH A 62 662 662 HOH HOH . T 11 HOH A 63 663 663 HOH HOH . T 11 HOH A 64 664 664 HOH HOH . T 11 HOH A 65 665 665 HOH HOH . T 11 HOH A 66 666 666 HOH HOH . T 11 HOH A 67 667 667 HOH HOH . T 11 HOH A 68 668 668 HOH HOH . T 11 HOH A 69 669 669 HOH HOH . T 11 HOH A 70 670 670 HOH HOH . T 11 HOH A 71 671 671 HOH HOH . T 11 HOH A 72 672 672 HOH HOH . T 11 HOH A 73 673 673 HOH HOH . U 11 HOH B 1 601 601 HOH HOH . U 11 HOH B 2 602 602 HOH HOH . U 11 HOH B 3 603 603 HOH HOH . U 11 HOH B 4 604 604 HOH HOH . U 11 HOH B 5 605 605 HOH HOH . U 11 HOH B 6 606 606 HOH HOH . U 11 HOH B 7 607 607 HOH HOH . U 11 HOH B 8 608 608 HOH HOH . U 11 HOH B 9 609 609 HOH HOH . U 11 HOH B 10 610 610 HOH HOH . U 11 HOH B 11 611 611 HOH HOH . U 11 HOH B 12 612 612 HOH HOH . U 11 HOH B 13 613 613 HOH HOH . U 11 HOH B 14 614 614 HOH HOH . U 11 HOH B 15 615 615 HOH HOH . U 11 HOH B 16 616 616 HOH HOH . U 11 HOH B 17 617 617 HOH HOH . U 11 HOH B 18 618 618 HOH HOH . U 11 HOH B 19 619 619 HOH HOH . U 11 HOH B 20 620 620 HOH HOH . U 11 HOH B 21 621 621 HOH HOH . U 11 HOH B 22 622 622 HOH HOH . U 11 HOH B 23 623 623 HOH HOH . U 11 HOH B 24 624 624 HOH HOH . U 11 HOH B 25 625 625 HOH HOH . U 11 HOH B 26 626 626 HOH HOH . U 11 HOH B 27 627 627 HOH HOH . U 11 HOH B 28 628 628 HOH HOH . U 11 HOH B 29 629 629 HOH HOH . U 11 HOH B 30 630 630 HOH HOH . U 11 HOH B 31 631 631 HOH HOH . U 11 HOH B 32 632 632 HOH HOH . U 11 HOH B 33 633 633 HOH HOH . U 11 HOH B 34 634 634 HOH HOH . U 11 HOH B 35 635 635 HOH HOH . U 11 HOH B 36 636 636 HOH HOH . U 11 HOH B 37 637 637 HOH HOH . U 11 HOH B 38 638 638 HOH HOH . U 11 HOH B 39 639 639 HOH HOH . U 11 HOH B 40 640 640 HOH HOH . U 11 HOH B 41 641 641 HOH HOH . U 11 HOH B 42 642 642 HOH HOH . U 11 HOH B 43 643 643 HOH HOH . U 11 HOH B 44 644 644 HOH HOH . U 11 HOH B 45 645 645 HOH HOH . U 11 HOH B 46 646 646 HOH HOH . U 11 HOH B 47 647 647 HOH HOH . U 11 HOH B 48 648 648 HOH HOH . U 11 HOH B 49 649 649 HOH HOH . U 11 HOH B 50 650 650 HOH HOH . U 11 HOH B 51 651 651 HOH HOH . U 11 HOH B 52 652 652 HOH HOH . U 11 HOH B 53 653 653 HOH HOH . U 11 HOH B 54 654 654 HOH HOH . U 11 HOH B 55 655 655 HOH HOH . U 11 HOH B 56 656 656 HOH HOH . U 11 HOH B 57 657 657 HOH HOH . U 11 HOH B 58 658 658 HOH HOH . U 11 HOH B 59 659 659 HOH HOH . U 11 HOH B 60 660 660 HOH HOH . U 11 HOH B 61 661 661 HOH HOH . U 11 HOH B 62 662 662 HOH HOH . U 11 HOH B 63 663 663 HOH HOH . U 11 HOH B 64 664 664 HOH HOH . U 11 HOH B 65 665 665 HOH HOH . U 11 HOH B 66 666 666 HOH HOH . U 11 HOH B 67 667 667 HOH HOH . V 11 HOH C 1 601 601 HOH HOH . V 11 HOH C 2 602 602 HOH HOH . V 11 HOH C 3 603 603 HOH HOH . V 11 HOH C 4 604 604 HOH HOH . V 11 HOH C 5 605 605 HOH HOH . V 11 HOH C 6 606 606 HOH HOH . V 11 HOH C 7 607 607 HOH HOH . V 11 HOH C 8 608 608 HOH HOH . V 11 HOH C 9 609 609 HOH HOH . V 11 HOH C 10 610 610 HOH HOH . V 11 HOH C 11 611 611 HOH HOH . V 11 HOH C 12 612 612 HOH HOH . V 11 HOH C 13 613 613 HOH HOH . V 11 HOH C 14 614 614 HOH HOH . V 11 HOH C 15 615 615 HOH HOH . V 11 HOH C 16 616 616 HOH HOH . V 11 HOH C 17 617 617 HOH HOH . V 11 HOH C 18 618 618 HOH HOH . V 11 HOH C 19 619 619 HOH HOH . V 11 HOH C 20 620 620 HOH HOH . V 11 HOH C 21 621 621 HOH HOH . V 11 HOH C 22 622 622 HOH HOH . V 11 HOH C 23 623 623 HOH HOH . V 11 HOH C 24 624 624 HOH HOH . V 11 HOH C 25 625 625 HOH HOH . V 11 HOH C 26 626 626 HOH HOH . V 11 HOH C 27 627 627 HOH HOH . V 11 HOH C 28 628 628 HOH HOH . V 11 HOH C 29 629 629 HOH HOH . V 11 HOH C 30 630 630 HOH HOH . V 11 HOH C 31 631 631 HOH HOH . V 11 HOH C 32 632 632 HOH HOH . V 11 HOH C 33 633 633 HOH HOH . V 11 HOH C 34 634 634 HOH HOH . V 11 HOH C 35 635 635 HOH HOH . V 11 HOH C 36 636 636 HOH HOH . V 11 HOH C 37 637 637 HOH HOH . V 11 HOH C 38 638 638 HOH HOH . V 11 HOH C 39 639 639 HOH HOH . V 11 HOH C 40 640 640 HOH HOH . V 11 HOH C 41 641 641 HOH HOH . V 11 HOH C 42 642 642 HOH HOH . V 11 HOH C 43 643 643 HOH HOH . V 11 HOH C 44 644 644 HOH HOH . V 11 HOH C 45 645 645 HOH HOH . V 11 HOH C 46 646 646 HOH HOH . V 11 HOH C 47 647 647 HOH HOH . V 11 HOH C 48 648 648 HOH HOH . V 11 HOH C 49 649 649 HOH HOH . V 11 HOH C 50 650 650 HOH HOH . V 11 HOH C 51 651 651 HOH HOH . V 11 HOH C 52 652 652 HOH HOH . V 11 HOH C 53 653 653 HOH HOH . V 11 HOH C 54 654 654 HOH HOH . V 11 HOH C 55 655 655 HOH HOH . V 11 HOH C 56 656 656 HOH HOH . V 11 HOH C 57 657 657 HOH HOH . V 11 HOH C 58 658 658 HOH HOH . V 11 HOH C 59 659 659 HOH HOH . V 11 HOH C 60 660 660 HOH HOH . V 11 HOH C 61 661 661 HOH HOH . V 11 HOH C 62 662 662 HOH HOH . V 11 HOH C 63 663 663 HOH HOH . V 11 HOH C 64 664 664 HOH HOH . V 11 HOH C 65 665 665 HOH HOH . V 11 HOH C 66 666 666 HOH HOH . V 11 HOH C 67 667 667 HOH HOH . V 11 HOH C 68 668 668 HOH HOH . V 11 HOH C 69 669 669 HOH HOH . V 11 HOH C 70 670 670 HOH HOH . V 11 HOH C 71 671 671 HOH HOH . V 11 HOH C 72 672 672 HOH HOH . V 11 HOH C 73 673 673 HOH HOH . V 11 HOH C 74 674 674 HOH HOH . V 11 HOH C 75 675 675 HOH HOH . V 11 HOH C 76 676 676 HOH HOH . V 11 HOH C 77 677 677 HOH HOH . V 11 HOH C 78 678 678 HOH HOH . V 11 HOH C 79 679 679 HOH HOH . V 11 HOH C 80 680 680 HOH HOH . V 11 HOH C 81 681 681 HOH HOH . V 11 HOH C 82 682 682 HOH HOH . V 11 HOH C 83 683 683 HOH HOH . V 11 HOH C 84 684 684 HOH HOH . V 11 HOH C 85 685 685 HOH HOH . V 11 HOH C 86 686 686 HOH HOH . V 11 HOH C 87 687 687 HOH HOH . V 11 HOH C 88 688 688 HOH HOH . V 11 HOH C 89 689 689 HOH HOH . V 11 HOH C 90 690 690 HOH HOH . V 11 HOH C 91 691 691 HOH HOH . V 11 HOH C 92 692 692 HOH HOH . V 11 HOH C 93 693 693 HOH HOH . V 11 HOH C 94 694 694 HOH HOH . V 11 HOH C 95 695 695 HOH HOH . V 11 HOH C 96 696 696 HOH HOH . V 11 HOH C 97 697 697 HOH HOH . V 11 HOH C 98 698 698 HOH HOH . V 11 HOH C 99 699 699 HOH HOH . V 11 HOH C 100 700 700 HOH HOH . V 11 HOH C 101 701 701 HOH HOH . V 11 HOH C 102 702 702 HOH HOH . V 11 HOH C 103 703 703 HOH HOH . V 11 HOH C 104 704 704 HOH HOH . V 11 HOH C 105 705 705 HOH HOH . V 11 HOH C 106 706 706 HOH HOH . V 11 HOH C 107 707 707 HOH HOH . V 11 HOH C 108 708 708 HOH HOH . V 11 HOH C 109 709 709 HOH HOH . V 11 HOH C 110 710 710 HOH HOH . V 11 HOH C 111 711 711 HOH HOH . V 11 HOH C 112 712 712 HOH HOH . V 11 HOH C 113 713 713 HOH HOH . V 11 HOH C 114 714 714 HOH HOH . V 11 HOH C 115 715 715 HOH HOH . V 11 HOH C 116 716 716 HOH HOH . V 11 HOH C 117 717 717 HOH HOH . V 11 HOH C 118 718 718 HOH HOH . V 11 HOH C 119 719 719 HOH HOH . V 11 HOH C 120 720 720 HOH HOH . V 11 HOH C 121 721 721 HOH HOH . V 11 HOH C 122 722 722 HOH HOH . V 11 HOH C 123 723 723 HOH HOH . V 11 HOH C 124 724 724 HOH HOH . V 11 HOH C 125 725 725 HOH HOH . V 11 HOH C 126 726 726 HOH HOH . V 11 HOH C 127 727 727 HOH HOH . V 11 HOH C 128 728 728 HOH HOH . V 11 HOH C 129 729 729 HOH HOH . V 11 HOH C 130 730 730 HOH HOH . V 11 HOH C 131 731 731 HOH HOH . V 11 HOH C 132 732 732 HOH HOH . V 11 HOH C 133 733 733 HOH HOH . V 11 HOH C 134 734 734 HOH HOH . V 11 HOH C 135 735 735 HOH HOH . V 11 HOH C 136 736 736 HOH HOH . V 11 HOH C 137 737 737 HOH HOH . V 11 HOH C 138 738 738 HOH HOH . V 11 HOH C 139 739 739 HOH HOH . V 11 HOH C 140 740 740 HOH HOH . V 11 HOH C 141 741 741 HOH HOH . V 11 HOH C 142 742 742 HOH HOH . V 11 HOH C 143 743 743 HOH HOH . V 11 HOH C 144 744 744 HOH HOH . V 11 HOH C 145 745 745 HOH HOH . V 11 HOH C 146 746 746 HOH HOH . V 11 HOH C 147 747 747 HOH HOH . V 11 HOH C 148 748 748 HOH HOH . V 11 HOH C 149 749 749 HOH HOH . V 11 HOH C 150 750 750 HOH HOH . V 11 HOH C 151 751 751 HOH HOH . V 11 HOH C 152 752 752 HOH HOH . V 11 HOH C 153 753 753 HOH HOH . V 11 HOH C 154 754 754 HOH HOH . V 11 HOH C 155 755 755 HOH HOH . V 11 HOH C 156 756 756 HOH HOH . V 11 HOH C 157 757 757 HOH HOH . V 11 HOH C 158 758 758 HOH HOH . V 11 HOH C 159 759 759 HOH HOH . W 11 HOH D 1 601 601 HOH HOH . W 11 HOH D 2 602 602 HOH HOH . W 11 HOH D 3 603 603 HOH HOH . W 11 HOH D 4 604 604 HOH HOH . W 11 HOH D 5 605 605 HOH HOH . W 11 HOH D 6 606 606 HOH HOH . W 11 HOH D 7 607 607 HOH HOH . W 11 HOH D 8 608 608 HOH HOH . W 11 HOH D 9 609 609 HOH HOH . W 11 HOH D 10 610 610 HOH HOH . W 11 HOH D 11 611 611 HOH HOH . W 11 HOH D 12 612 612 HOH HOH . W 11 HOH D 13 613 613 HOH HOH . W 11 HOH D 14 614 614 HOH HOH . W 11 HOH D 15 615 615 HOH HOH . W 11 HOH D 16 616 616 HOH HOH . W 11 HOH D 17 617 617 HOH HOH . W 11 HOH D 18 618 618 HOH HOH . W 11 HOH D 19 619 619 HOH HOH . W 11 HOH D 20 620 620 HOH HOH . W 11 HOH D 21 621 621 HOH HOH . W 11 HOH D 22 622 622 HOH HOH . W 11 HOH D 23 623 623 HOH HOH . W 11 HOH D 24 624 624 HOH HOH . W 11 HOH D 25 625 625 HOH HOH . W 11 HOH D 26 626 626 HOH HOH . W 11 HOH D 27 627 627 HOH HOH . W 11 HOH D 28 628 628 HOH HOH . W 11 HOH D 29 629 629 HOH HOH . W 11 HOH D 30 630 630 HOH HOH . W 11 HOH D 31 631 631 HOH HOH . W 11 HOH D 32 632 632 HOH HOH . W 11 HOH D 33 633 633 HOH HOH . W 11 HOH D 34 634 634 HOH HOH . W 11 HOH D 35 635 635 HOH HOH . W 11 HOH D 36 636 636 HOH HOH . W 11 HOH D 37 637 637 HOH HOH . W 11 HOH D 38 638 638 HOH HOH . W 11 HOH D 39 639 639 HOH HOH . W 11 HOH D 40 640 640 HOH HOH . W 11 HOH D 41 641 641 HOH HOH . W 11 HOH D 42 642 642 HOH HOH . W 11 HOH D 43 643 643 HOH HOH . W 11 HOH D 44 644 644 HOH HOH . W 11 HOH D 45 645 645 HOH HOH . W 11 HOH D 46 646 646 HOH HOH . W 11 HOH D 47 647 647 HOH HOH . W 11 HOH D 48 648 648 HOH HOH . W 11 HOH D 49 649 649 HOH HOH . W 11 HOH D 50 650 650 HOH HOH . W 11 HOH D 51 651 651 HOH HOH . X 11 HOH E 1 201 201 HOH HOH . X 11 HOH E 2 202 202 HOH HOH . X 11 HOH E 3 203 203 HOH HOH . X 11 HOH E 4 204 204 HOH HOH . X 11 HOH E 5 205 205 HOH HOH . X 11 HOH E 6 206 206 HOH HOH . X 11 HOH E 7 207 207 HOH HOH . X 11 HOH E 8 208 208 HOH HOH . Y 11 HOH F 1 601 601 HOH HOH . Y 11 HOH F 2 602 602 HOH HOH . Y 11 HOH F 3 603 603 HOH HOH . Y 11 HOH F 4 604 604 HOH HOH . Y 11 HOH F 5 605 605 HOH HOH . Y 11 HOH F 6 606 606 HOH HOH . Y 11 HOH F 7 607 607 HOH HOH . Y 11 HOH F 8 608 608 HOH HOH . Y 11 HOH F 9 609 609 HOH HOH . Y 11 HOH F 10 610 610 HOH HOH . Y 11 HOH F 11 611 611 HOH HOH . Y 11 HOH F 12 612 612 HOH HOH . Y 11 HOH F 13 613 613 HOH HOH . Y 11 HOH F 14 614 614 HOH HOH . Y 11 HOH F 15 615 615 HOH HOH . Y 11 HOH F 16 616 616 HOH HOH . Y 11 HOH F 17 617 617 HOH HOH . Y 11 HOH F 18 618 618 HOH HOH . Y 11 HOH F 19 619 619 HOH HOH . Y 11 HOH F 20 620 620 HOH HOH . Y 11 HOH F 21 621 621 HOH HOH . Y 11 HOH F 22 622 622 HOH HOH . Y 11 HOH F 23 623 623 HOH HOH . Y 11 HOH F 24 624 624 HOH HOH . Y 11 HOH F 25 625 625 HOH HOH . Y 11 HOH F 26 626 626 HOH HOH . Y 11 HOH F 27 627 627 HOH HOH . Y 11 HOH F 28 628 628 HOH HOH . Y 11 HOH F 29 629 629 HOH HOH . Y 11 HOH F 30 630 630 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . K 8 19.089 49.666 15.988 1 49.95 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . K 8 18.722 50.667 14.921 1 43.66 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . K 8 19.659 50.405 17.179 1 53.32 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . K 8 20.196 48.738 15.525 1 53.2 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . K 8 17.828 48.745 16.331 1 58.28 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . K 8 16.514 49.3 17.071 1 50.4 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . K 8 15.316 49.344 16.157 1 56.19 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . K 8 16.775 50.66 17.664 1 45.79 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . K 8 16.357 48.155 18.166 1 49.61 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . K 8 15.246 47.274 18.249 1 52.49 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . K 8 14.776 47.332 19.695 1 47.85 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . K 8 14.317 48.662 19.948 1 47.55 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . K 8 13.585 46.434 19.942 1 47.88 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . K 8 13.566 46.145 21.349 1 43.78 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . K 8 12.409 47.317 19.577 1 49.14 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . K 8 11.252 46.925 20.31 1 53.8 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . K 8 12.884 48.673 20.049 1 48.29 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . K 8 12.419 49.848 19.278 1 46.47 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . K 8 12.722 50.156 18.001 1 49.48 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . K 8 12.167 51.347 17.653 1 45.45 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . K 8 11.505 51.823 18.732 1 47.34 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . K 8 10.707 53.018 19.074 1 54.8 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . K 8 10.505 53.912 18.23 1 59.12 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . K 8 10.223 53.126 20.32 1 53.61 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . K 8 10.426 52.185 21.263 1 49.24 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . K 8 9.893 52.338 22.5 1 43.36 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . K 8 11.136 51.071 21.018 1 47.21 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . K 8 11.686 50.841 19.801 1 43.14 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #