data_5LAY
#
_model_server_result.job_id            B4PvaANpeSIj8TWSpBtCKQ 
_model_server_result.datetime_utc      '2024-10-12 15:24:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lay 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":201}' 
#
_entry.id    5LAY 
#
_exptl.entry_id    5LAY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5LAY 
_cell.length_a            71.45 
_cell.length_b            71.45 
_cell.length_c            520.977 
_cell.Z_PDB               72 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LAY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H,I,J,K,V 1 1 
B,L,M,W 2 1 
C,N,O,X 3 1 
D,P,Q,Y 4 1 
E,R,S,T,Z 5 1 
F,U,AA 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 N N N 
? 2 R N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 194 n n 
C1 C2 GOL sing 195 n n 
C1 H11 GOL sing 196 n n 
C1 H12 GOL sing 197 n n 
O1 HO1 GOL sing 198 n n 
C2 O2 GOL sing 199 n n 
C2 C3 GOL sing 200 n n 
C2 H2 GOL sing 201 n n 
O2 HO2 GOL sing 202 n n 
C3 O3 GOL sing 203 n n 
C3 H31 GOL sing 204 n n 
C3 H32 GOL sing 205 n n 
O3 HO3 GOL sing 206 n n 
#
_atom_sites.entry_id                     5LAY 
_atom_sites.fract_transf_matrix[1][1]    0.013996 
_atom_sites.fract_transf_matrix[1][2]    0.00808 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016161 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001919 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 GOL A 1 201 6 GOL GOL . 
H 2 GOL A 1 202 7 GOL GOL . 
I 2 GOL A 1 203 8 GOL GOL . 
J 3 SO4 A 1 204 13 SO4 SO4 . 
K 4 6SS A 1 205 1 6SS INX . 
L 3 SO4 B 1 201 14 SO4 SO4 . 
M 4 6SS B 1 202 2 6SS INX . 
N 2 GOL C 1 201 5 GOL GOL . 
O 4 6SS C 1 202 3 6SS INX . 
P 3 SO4 D 1 201 12 SO4 SO4 . 
Q 4 6SS D 1 202 4 6SS INX . 
R 2 GOL E 1 201 9 GOL GOL . 
S 3 SO4 E 1 202 15 SO4 SO4 . 
T 4 6SS E 1 203 5 6SS INX . 
U 4 6SS F 1 201 6 6SS INX . 
V 5 HOH A 1 301 10 HOH HOH . 
V 5 HOH A 2 302 291 HOH HOH . 
V 5 HOH A 3 303 185 HOH HOH . 
V 5 HOH A 4 304 49 HOH HOH . 
V 5 HOH A 5 305 306 HOH HOH . 
V 5 HOH A 6 306 201 HOH HOH . 
V 5 HOH A 7 307 304 HOH HOH . 
V 5 HOH A 8 308 51 HOH HOH . 
V 5 HOH A 9 309 162 HOH HOH . 
V 5 HOH A 10 310 21 HOH HOH . 
V 5 HOH A 11 311 311 HOH HOH . 
V 5 HOH A 12 312 280 HOH HOH . 
V 5 HOH A 13 313 310 HOH HOH . 
V 5 HOH A 14 314 18 HOH HOH . 
V 5 HOH A 15 315 102 HOH HOH . 
V 5 HOH A 16 316 230 HOH HOH . 
V 5 HOH A 17 317 94 HOH HOH . 
V 5 HOH A 18 318 317 HOH HOH . 
V 5 HOH A 19 319 314 HOH HOH . 
V 5 HOH A 20 320 325 HOH HOH . 
V 5 HOH A 21 321 320 HOH HOH . 
V 5 HOH A 22 322 116 HOH HOH . 
V 5 HOH A 23 323 166 HOH HOH . 
V 5 HOH A 24 324 235 HOH HOH . 
V 5 HOH A 25 325 175 HOH HOH . 
V 5 HOH A 26 326 321 HOH HOH . 
W 5 HOH B 1 301 305 HOH HOH . 
W 5 HOH B 2 302 315 HOH HOH . 
W 5 HOH B 3 303 167 HOH HOH . 
W 5 HOH B 4 304 1 HOH HOH . 
W 5 HOH B 5 305 50 HOH HOH . 
W 5 HOH B 6 306 211 HOH HOH . 
W 5 HOH B 7 307 326 HOH HOH . 
W 5 HOH B 8 308 87 HOH HOH . 
W 5 HOH B 9 309 285 HOH HOH . 
W 5 HOH B 10 310 88 HOH HOH . 
W 5 HOH B 11 311 318 HOH HOH . 
W 5 HOH B 12 312 95 HOH HOH . 
W 5 HOH B 13 313 7 HOH HOH . 
W 5 HOH B 14 314 25 HOH HOH . 
W 5 HOH B 15 315 41 HOH HOH . 
W 5 HOH B 16 316 284 HOH HOH . 
W 5 HOH B 17 317 149 HOH HOH . 
W 5 HOH B 18 318 17 HOH HOH . 
W 5 HOH B 19 319 122 HOH HOH . 
W 5 HOH B 20 320 219 HOH HOH . 
W 5 HOH B 21 321 286 HOH HOH . 
W 5 HOH B 22 322 74 HOH HOH . 
W 5 HOH B 23 323 110 HOH HOH . 
X 5 HOH C 1 301 43 HOH HOH . 
X 5 HOH C 2 302 197 HOH HOH . 
X 5 HOH C 3 303 237 HOH HOH . 
X 5 HOH C 4 304 309 HOH HOH . 
X 5 HOH C 5 305 16 HOH HOH . 
X 5 HOH C 6 306 324 HOH HOH . 
X 5 HOH C 7 307 257 HOH HOH . 
X 5 HOH C 8 308 322 HOH HOH . 
X 5 HOH C 9 309 114 HOH HOH . 
X 5 HOH C 10 310 308 HOH HOH . 
X 5 HOH C 11 311 125 HOH HOH . 
X 5 HOH C 12 312 198 HOH HOH . 
X 5 HOH C 13 313 217 HOH HOH . 
X 5 HOH C 14 314 157 HOH HOH . 
Y 5 HOH D 1 301 91 HOH HOH . 
Y 5 HOH D 2 302 307 HOH HOH . 
Y 5 HOH D 3 303 73 HOH HOH . 
Y 5 HOH D 4 304 319 HOH HOH . 
Y 5 HOH D 5 305 323 HOH HOH . 
Y 5 HOH D 6 306 61 HOH HOH . 
Y 5 HOH D 7 307 103 HOH HOH . 
Y 5 HOH D 8 308 39 HOH HOH . 
Y 5 HOH D 9 309 313 HOH HOH . 
Y 5 HOH D 10 310 105 HOH HOH . 
Y 5 HOH D 11 311 13 HOH HOH . 
Y 5 HOH D 12 312 169 HOH HOH . 
Y 5 HOH D 13 313 109 HOH HOH . 
Y 5 HOH D 14 314 69 HOH HOH . 
Y 5 HOH D 15 315 316 HOH HOH . 
Y 5 HOH D 16 316 180 HOH HOH . 
Y 5 HOH D 17 317 28 HOH HOH . 
Y 5 HOH D 18 318 82 HOH HOH . 
Y 5 HOH D 19 319 241 HOH HOH . 
Y 5 HOH D 20 320 247 HOH HOH . 
Y 5 HOH D 21 321 120 HOH HOH . 
Y 5 HOH D 22 322 312 HOH HOH . 
Y 5 HOH D 23 323 294 HOH HOH . 
Y 5 HOH D 24 324 278 HOH HOH . 
Y 5 HOH D 25 325 60 HOH HOH . 
Y 5 HOH D 26 326 282 HOH HOH . 
Z 5 HOH E 1 301 159 HOH HOH . 
Z 5 HOH E 2 302 303 HOH HOH . 
Z 5 HOH E 3 303 244 HOH HOH . 
Z 5 HOH E 4 304 243 HOH HOH . 
Z 5 HOH E 5 305 273 HOH HOH . 
Z 5 HOH E 6 306 101 HOH HOH . 
AA 5 HOH F 1 301 172 HOH HOH . 
AA 5 HOH F 2 302 155 HOH HOH . 
AA 5 HOH F 3 303 194 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 2 16.543 -11.497 32.055 1 35.34 ? C1 GOL 201 C 1 
HETATM 2 O O1 GOL . . . N 2 15.703 -10.501 32.649 1 34.71 ? O1 GOL 201 C 1 
HETATM 3 C C2 GOL . . . N 2 17.548 -11.969 33.097 1 35.06 ? C2 GOL 201 C 1 
HETATM 4 O O2 GOL . . . N 2 16.83 -12.402 34.255 1 37.49 ? O2 GOL 201 C 1 
HETATM 5 C C3 GOL . . . N 2 18.4 -13.125 32.571 1 35.04 ? C3 GOL 201 C 1 
HETATM 6 O O3 GOL . . . N 2 19.806 -12.836 32.595 1 35.4 ? O3 GOL 201 C 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#