data_5LBD # _model_server_result.job_id jMdFE8PRaRBachkacwQh_g _model_server_result.datetime_utc '2025-04-04 13:39:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lbd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":802}' # _entry.id 5LBD # _exptl.entry_id 5LBD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5LBD _cell.length_a 38.8 _cell.length_b 65.191 _cell.length_c 85.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LBD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1 B,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 57 A CYS 660 1_555 B SG CYS 57 B CYS 660 4_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale1 A C LEU 30 A LEU 633 1_555 A N MSE 31 A MSE 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale2 A C MSE 31 A MSE 634 1_555 A N LEU 32 A LEU 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C THR 59 A THR 662 1_555 A N MSE 60 A MSE 663 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C THR 59 A THR 662 1_555 A N MSE 60 A MSE 663 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 60 A MSE 663 1_555 A N LYS 61 A LYS 664 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 60 A MSE 663 1_555 A N LYS 61 A LYS 664 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 B C LEU 30 B LEU 633 1_555 B N MSE 31 B MSE 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 B C MSE 31 B MSE 634 1_555 B N LEU 32 B LEU 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 B C THR 59 B THR 662 1_555 B N MSE 60 B MSE 663 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.324 ? covale ? covale10 B C THR 59 B THR 662 1_555 B N MSE 60 B MSE 663 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.326 ? covale ? covale11 B C MSE 60 B MSE 663 1_555 B N LYS 61 B LYS 664 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 B C MSE 60 B MSE 663 1_555 B N LYS 61 B LYS 664 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5LBD _atom_sites.fract_transf_matrix[1][1] 0.025773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD A 1 801 1 IOD IOD . D 2 IOD A 1 802 3 IOD IOD . E 2 IOD A 1 803 5 IOD IOD . F 2 IOD A 1 804 7 IOD IOD . G 3 NH4 A 1 805 1 NH4 NH4 . H 2 IOD B 1 801 2 IOD IOD . I 4 CL B 1 802 4 CL CL . J 5 EDO B 1 803 6 EDO EDO . K 4 CL B 1 804 8 CL CL . L 5 EDO B 1 805 9 EDO EDO . M 3 NH4 B 1 806 1 NH4 NH4 . N 6 HOH A 1 901 104 HOH HOH . N 6 HOH A 2 902 117 HOH HOH . N 6 HOH A 3 903 72 HOH HOH . N 6 HOH A 4 904 96 HOH HOH . N 6 HOH A 5 905 130 HOH HOH . N 6 HOH A 6 906 119 HOH HOH . N 6 HOH A 7 907 43 HOH HOH . N 6 HOH A 8 908 101 HOH HOH . N 6 HOH A 9 909 39 HOH HOH . N 6 HOH A 10 910 99 HOH HOH . N 6 HOH A 11 911 75 HOH HOH . N 6 HOH A 12 912 69 HOH HOH . N 6 HOH A 13 913 3 HOH HOH . N 6 HOH A 14 914 140 HOH HOH . N 6 HOH A 15 915 33 HOH HOH . N 6 HOH A 16 916 16 HOH HOH . N 6 HOH A 17 917 54 HOH HOH . N 6 HOH A 18 918 83 HOH HOH . N 6 HOH A 19 919 19 HOH HOH . N 6 HOH A 20 920 77 HOH HOH . N 6 HOH A 21 921 125 HOH HOH . N 6 HOH A 22 922 13 HOH HOH . N 6 HOH A 23 923 21 HOH HOH . N 6 HOH A 24 924 85 HOH HOH . N 6 HOH A 25 925 100 HOH HOH . N 6 HOH A 26 926 42 HOH HOH . N 6 HOH A 27 927 87 HOH HOH . N 6 HOH A 28 928 11 HOH HOH . N 6 HOH A 29 929 55 HOH HOH . N 6 HOH A 30 930 25 HOH HOH . N 6 HOH A 31 931 53 HOH HOH . N 6 HOH A 32 932 27 HOH HOH . N 6 HOH A 33 933 95 HOH HOH . N 6 HOH A 34 934 7 HOH HOH . N 6 HOH A 35 935 128 HOH HOH . N 6 HOH A 36 936 132 HOH HOH . N 6 HOH A 37 937 17 HOH HOH . N 6 HOH A 38 938 94 HOH HOH . N 6 HOH A 39 939 6 HOH HOH . N 6 HOH A 40 940 12 HOH HOH . N 6 HOH A 41 941 147 HOH HOH . N 6 HOH A 42 942 30 HOH HOH . N 6 HOH A 43 943 38 HOH HOH . N 6 HOH A 44 944 46 HOH HOH . N 6 HOH A 45 945 108 HOH HOH . N 6 HOH A 46 946 137 HOH HOH . N 6 HOH A 47 947 123 HOH HOH . N 6 HOH A 48 948 102 HOH HOH . N 6 HOH A 49 949 60 HOH HOH . N 6 HOH A 50 950 144 HOH HOH . N 6 HOH A 51 951 134 HOH HOH . N 6 HOH A 52 952 48 HOH HOH . N 6 HOH A 53 953 78 HOH HOH . N 6 HOH A 54 954 115 HOH HOH . N 6 HOH A 55 955 149 HOH HOH . N 6 HOH A 56 956 61 HOH HOH . N 6 HOH A 57 957 141 HOH HOH . N 6 HOH A 58 958 67 HOH HOH . N 6 HOH A 59 959 93 HOH HOH . N 6 HOH A 60 960 32 HOH HOH . N 6 HOH A 61 961 107 HOH HOH . N 6 HOH A 62 962 40 HOH HOH . N 6 HOH A 63 963 79 HOH HOH . N 6 HOH A 64 964 138 HOH HOH . N 6 HOH A 65 965 41 HOH HOH . N 6 HOH A 66 966 50 HOH HOH . N 6 HOH A 67 967 80 HOH HOH . N 6 HOH A 68 968 66 HOH HOH . N 6 HOH A 69 969 76 HOH HOH . N 6 HOH A 70 970 45 HOH HOH . N 6 HOH A 71 971 148 HOH HOH . N 6 HOH A 72 972 131 HOH HOH . N 6 HOH A 73 973 126 HOH HOH . N 6 HOH A 74 974 145 HOH HOH . O 6 HOH B 1 901 56 HOH HOH . O 6 HOH B 2 902 82 HOH HOH . O 6 HOH B 3 903 22 HOH HOH . O 6 HOH B 4 904 73 HOH HOH . O 6 HOH B 5 905 59 HOH HOH . O 6 HOH B 6 906 92 HOH HOH . O 6 HOH B 7 907 63 HOH HOH . O 6 HOH B 8 908 90 HOH HOH . O 6 HOH B 9 909 57 HOH HOH . O 6 HOH B 10 910 110 HOH HOH . O 6 HOH B 11 911 35 HOH HOH . O 6 HOH B 12 912 64 HOH HOH . O 6 HOH B 13 913 10 HOH HOH . O 6 HOH B 14 914 37 HOH HOH . O 6 HOH B 15 915 124 HOH HOH . O 6 HOH B 16 916 49 HOH HOH . O 6 HOH B 17 917 29 HOH HOH . O 6 HOH B 18 918 58 HOH HOH . O 6 HOH B 19 919 52 HOH HOH . O 6 HOH B 20 920 14 HOH HOH . O 6 HOH B 21 921 51 HOH HOH . O 6 HOH B 22 922 28 HOH HOH . O 6 HOH B 23 923 65 HOH HOH . O 6 HOH B 24 924 118 HOH HOH . O 6 HOH B 25 925 2 HOH HOH . O 6 HOH B 26 926 18 HOH HOH . O 6 HOH B 27 927 1 HOH HOH . O 6 HOH B 28 928 116 HOH HOH . O 6 HOH B 29 929 86 HOH HOH . O 6 HOH B 30 930 24 HOH HOH . O 6 HOH B 31 931 23 HOH HOH . O 6 HOH B 32 932 62 HOH HOH . O 6 HOH B 33 933 112 HOH HOH . O 6 HOH B 34 934 142 HOH HOH . O 6 HOH B 35 935 36 HOH HOH . O 6 HOH B 36 936 15 HOH HOH . O 6 HOH B 37 937 8 HOH HOH . O 6 HOH B 38 938 44 HOH HOH . O 6 HOH B 39 939 98 HOH HOH . O 6 HOH B 40 940 26 HOH HOH . O 6 HOH B 41 941 114 HOH HOH . O 6 HOH B 42 942 89 HOH HOH . O 6 HOH B 43 943 136 HOH HOH . O 6 HOH B 44 944 103 HOH HOH . O 6 HOH B 45 945 135 HOH HOH . O 6 HOH B 46 946 9 HOH HOH . O 6 HOH B 47 947 105 HOH HOH . O 6 HOH B 48 948 47 HOH HOH . O 6 HOH B 49 949 20 HOH HOH . O 6 HOH B 50 950 113 HOH HOH . O 6 HOH B 51 951 88 HOH HOH . O 6 HOH B 52 952 97 HOH HOH . O 6 HOH B 53 953 71 HOH HOH . O 6 HOH B 54 954 84 HOH HOH . O 6 HOH B 55 955 121 HOH HOH . O 6 HOH B 56 956 74 HOH HOH . O 6 HOH B 57 957 31 HOH HOH . O 6 HOH B 58 958 70 HOH HOH . O 6 HOH B 59 959 91 HOH HOH . O 6 HOH B 60 960 129 HOH HOH . O 6 HOH B 61 961 81 HOH HOH . O 6 HOH B 62 962 4 HOH HOH . O 6 HOH B 63 963 133 HOH HOH . O 6 HOH B 64 964 106 HOH HOH . O 6 HOH B 65 965 109 HOH HOH . O 6 HOH B 66 966 120 HOH HOH . O 6 HOH B 67 967 111 HOH HOH . O 6 HOH B 68 968 68 HOH HOH . O 6 HOH B 69 969 34 HOH HOH . O 6 HOH B 70 970 146 HOH HOH . O 6 HOH B 71 971 5 HOH HOH . O 6 HOH B 72 972 127 HOH HOH . O 6 HOH B 73 973 139 HOH HOH . O 6 HOH B 74 974 122 HOH HOH . O 6 HOH B 75 975 143 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x -44.661 _atom_site.Cartn_y 20.173 _atom_site.Cartn_z 108.027 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 802 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 391 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #