data_5LBI # _model_server_result.job_id La4p1yUWAsI9s6JJD3R6HQ _model_server_result.datetime_utc '2024-11-25 06:53:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5LBI # _exptl.entry_id 5LBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.53 _cell.angle_gamma 90 _cell.entry_id 5LBI _cell.length_a 37.35 _cell.length_b 77.98 _cell.length_c 39.81 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id CA _struct_conn.ptnr1_label_comp_id CA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CA _struct_conn.ptnr1_auth_seq_id 401 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id O _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 3.053 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5LBI _atom_sites.fract_transf_matrix[1][1] 0.026774 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.013955 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 401 1 CA CA . C 3 HOH A 1 501 261 HOH HOH . C 3 HOH A 2 502 87 HOH HOH . C 3 HOH A 3 503 94 HOH HOH . C 3 HOH A 4 504 49 HOH HOH . C 3 HOH A 5 505 73 HOH HOH . C 3 HOH A 6 506 184 HOH HOH . C 3 HOH A 7 507 28 HOH HOH . C 3 HOH A 8 508 52 HOH HOH . C 3 HOH A 9 509 16 HOH HOH . C 3 HOH A 10 510 145 HOH HOH . C 3 HOH A 11 511 32 HOH HOH . C 3 HOH A 12 512 111 HOH HOH . C 3 HOH A 13 513 44 HOH HOH . C 3 HOH A 14 514 93 HOH HOH . C 3 HOH A 15 515 148 HOH HOH . C 3 HOH A 16 516 267 HOH HOH . C 3 HOH A 17 517 135 HOH HOH . C 3 HOH A 18 518 75 HOH HOH . C 3 HOH A 19 519 4 HOH HOH . C 3 HOH A 20 520 2 HOH HOH . C 3 HOH A 21 521 40 HOH HOH . C 3 HOH A 22 522 24 HOH HOH . C 3 HOH A 23 523 259 HOH HOH . C 3 HOH A 24 524 38 HOH HOH . C 3 HOH A 25 525 60 HOH HOH . C 3 HOH A 26 526 10 HOH HOH . C 3 HOH A 27 527 245 HOH HOH . C 3 HOH A 28 528 167 HOH HOH . C 3 HOH A 29 529 137 HOH HOH . C 3 HOH A 30 530 263 HOH HOH . C 3 HOH A 31 531 144 HOH HOH . C 3 HOH A 32 532 63 HOH HOH . C 3 HOH A 33 533 169 HOH HOH . C 3 HOH A 34 534 95 HOH HOH . C 3 HOH A 35 535 33 HOH HOH . C 3 HOH A 36 536 172 HOH HOH . C 3 HOH A 37 537 258 HOH HOH . C 3 HOH A 38 538 170 HOH HOH . C 3 HOH A 39 539 101 HOH HOH . C 3 HOH A 40 540 3 HOH HOH . C 3 HOH A 41 541 69 HOH HOH . C 3 HOH A 42 542 147 HOH HOH . C 3 HOH A 43 543 182 HOH HOH . C 3 HOH A 44 544 31 HOH HOH . C 3 HOH A 45 545 175 HOH HOH . C 3 HOH A 46 546 207 HOH HOH . C 3 HOH A 47 547 12 HOH HOH . C 3 HOH A 48 548 136 HOH HOH . C 3 HOH A 49 549 219 HOH HOH . C 3 HOH A 50 550 251 HOH HOH . C 3 HOH A 51 551 6 HOH HOH . C 3 HOH A 52 552 27 HOH HOH . C 3 HOH A 53 553 180 HOH HOH . C 3 HOH A 54 554 29 HOH HOH . C 3 HOH A 55 555 85 HOH HOH . C 3 HOH A 56 556 72 HOH HOH . C 3 HOH A 57 557 26 HOH HOH . C 3 HOH A 58 558 264 HOH HOH . C 3 HOH A 59 559 86 HOH HOH . C 3 HOH A 60 560 99 HOH HOH . C 3 HOH A 61 561 15 HOH HOH . C 3 HOH A 62 562 188 HOH HOH . C 3 HOH A 63 563 48 HOH HOH . C 3 HOH A 64 564 151 HOH HOH . C 3 HOH A 65 565 25 HOH HOH . C 3 HOH A 66 566 209 HOH HOH . C 3 HOH A 67 567 257 HOH HOH . C 3 HOH A 68 568 79 HOH HOH . C 3 HOH A 69 569 83 HOH HOH . C 3 HOH A 70 570 174 HOH HOH . C 3 HOH A 71 571 108 HOH HOH . C 3 HOH A 72 572 225 HOH HOH . C 3 HOH A 73 573 5 HOH HOH . C 3 HOH A 74 574 46 HOH HOH . C 3 HOH A 75 575 107 HOH HOH . C 3 HOH A 76 576 109 HOH HOH . C 3 HOH A 77 577 200 HOH HOH . C 3 HOH A 78 578 11 HOH HOH . C 3 HOH A 79 579 90 HOH HOH . C 3 HOH A 80 580 119 HOH HOH . C 3 HOH A 81 581 65 HOH HOH . C 3 HOH A 82 582 80 HOH HOH . C 3 HOH A 83 583 206 HOH HOH . C 3 HOH A 84 584 88 HOH HOH . C 3 HOH A 85 585 154 HOH HOH . C 3 HOH A 86 586 131 HOH HOH . C 3 HOH A 87 587 248 HOH HOH . C 3 HOH A 88 588 252 HOH HOH . C 3 HOH A 89 589 45 HOH HOH . C 3 HOH A 90 590 1 HOH HOH . C 3 HOH A 91 591 17 HOH HOH . C 3 HOH A 92 592 197 HOH HOH . C 3 HOH A 93 593 181 HOH HOH . C 3 HOH A 94 594 7 HOH HOH . C 3 HOH A 95 595 198 HOH HOH . C 3 HOH A 96 596 13 HOH HOH . C 3 HOH A 97 597 9 HOH HOH . C 3 HOH A 98 598 122 HOH HOH . C 3 HOH A 99 599 165 HOH HOH . C 3 HOH A 100 600 190 HOH HOH . C 3 HOH A 101 601 155 HOH HOH . C 3 HOH A 102 602 39 HOH HOH . C 3 HOH A 103 603 241 HOH HOH . C 3 HOH A 104 604 191 HOH HOH . C 3 HOH A 105 605 113 HOH HOH . C 3 HOH A 106 606 21 HOH HOH . C 3 HOH A 107 607 129 HOH HOH . C 3 HOH A 108 608 77 HOH HOH . C 3 HOH A 109 609 229 HOH HOH . C 3 HOH A 110 610 37 HOH HOH . C 3 HOH A 111 611 34 HOH HOH . C 3 HOH A 112 612 78 HOH HOH . C 3 HOH A 113 613 250 HOH HOH . C 3 HOH A 114 614 253 HOH HOH . C 3 HOH A 115 615 71 HOH HOH . C 3 HOH A 116 616 68 HOH HOH . C 3 HOH A 117 617 125 HOH HOH . C 3 HOH A 118 618 14 HOH HOH . C 3 HOH A 119 619 173 HOH HOH . C 3 HOH A 120 620 141 HOH HOH . C 3 HOH A 121 621 139 HOH HOH . C 3 HOH A 122 622 150 HOH HOH . C 3 HOH A 123 623 115 HOH HOH . C 3 HOH A 124 624 67 HOH HOH . C 3 HOH A 125 625 106 HOH HOH . C 3 HOH A 126 626 50 HOH HOH . C 3 HOH A 127 627 204 HOH HOH . C 3 HOH A 128 628 146 HOH HOH . C 3 HOH A 129 629 235 HOH HOH . C 3 HOH A 130 630 121 HOH HOH . C 3 HOH A 131 631 70 HOH HOH . C 3 HOH A 132 632 130 HOH HOH . C 3 HOH A 133 633 133 HOH HOH . C 3 HOH A 134 634 20 HOH HOH . C 3 HOH A 135 635 22 HOH HOH . C 3 HOH A 136 636 271 HOH HOH . C 3 HOH A 137 637 61 HOH HOH . C 3 HOH A 138 638 117 HOH HOH . C 3 HOH A 139 639 160 HOH HOH . C 3 HOH A 140 640 177 HOH HOH . C 3 HOH A 141 641 41 HOH HOH . C 3 HOH A 142 642 118 HOH HOH . C 3 HOH A 143 643 265 HOH HOH . C 3 HOH A 144 644 268 HOH HOH . C 3 HOH A 145 645 30 HOH HOH . C 3 HOH A 146 646 249 HOH HOH . C 3 HOH A 147 647 104 HOH HOH . C 3 HOH A 148 648 57 HOH HOH . C 3 HOH A 149 649 234 HOH HOH . C 3 HOH A 150 650 210 HOH HOH . C 3 HOH A 151 651 84 HOH HOH . C 3 HOH A 152 652 42 HOH HOH . C 3 HOH A 153 653 260 HOH HOH . C 3 HOH A 154 654 239 HOH HOH . C 3 HOH A 155 655 76 HOH HOH . C 3 HOH A 156 656 98 HOH HOH . C 3 HOH A 157 657 82 HOH HOH . C 3 HOH A 158 658 262 HOH HOH . C 3 HOH A 159 659 19 HOH HOH . C 3 HOH A 160 660 47 HOH HOH . C 3 HOH A 161 661 58 HOH HOH . C 3 HOH A 162 662 132 HOH HOH . C 3 HOH A 163 663 62 HOH HOH . C 3 HOH A 164 664 43 HOH HOH . C 3 HOH A 165 665 8 HOH HOH . C 3 HOH A 166 666 185 HOH HOH . C 3 HOH A 167 667 143 HOH HOH . C 3 HOH A 168 668 134 HOH HOH . C 3 HOH A 169 669 186 HOH HOH . C 3 HOH A 170 670 140 HOH HOH . C 3 HOH A 171 671 216 HOH HOH . C 3 HOH A 172 672 23 HOH HOH . C 3 HOH A 173 673 171 HOH HOH . C 3 HOH A 174 674 81 HOH HOH . C 3 HOH A 175 675 120 HOH HOH . C 3 HOH A 176 676 100 HOH HOH . C 3 HOH A 177 677 223 HOH HOH . C 3 HOH A 178 678 112 HOH HOH . C 3 HOH A 179 679 238 HOH HOH . C 3 HOH A 180 680 74 HOH HOH . C 3 HOH A 181 681 157 HOH HOH . C 3 HOH A 182 682 227 HOH HOH . C 3 HOH A 183 683 187 HOH HOH . C 3 HOH A 184 684 128 HOH HOH . C 3 HOH A 185 685 222 HOH HOH . C 3 HOH A 186 686 194 HOH HOH . C 3 HOH A 187 687 92 HOH HOH . C 3 HOH A 188 688 138 HOH HOH . C 3 HOH A 189 689 54 HOH HOH . C 3 HOH A 190 690 193 HOH HOH . C 3 HOH A 191 691 189 HOH HOH . C 3 HOH A 192 692 166 HOH HOH . C 3 HOH A 193 693 226 HOH HOH . C 3 HOH A 194 694 213 HOH HOH . C 3 HOH A 195 695 176 HOH HOH . C 3 HOH A 196 696 244 HOH HOH . C 3 HOH A 197 697 220 HOH HOH . C 3 HOH A 198 698 36 HOH HOH . C 3 HOH A 199 699 163 HOH HOH . C 3 HOH A 200 700 228 HOH HOH . C 3 HOH A 201 701 124 HOH HOH . C 3 HOH A 202 702 266 HOH HOH . C 3 HOH A 203 703 240 HOH HOH . C 3 HOH A 204 704 203 HOH HOH . C 3 HOH A 205 705 237 HOH HOH . C 3 HOH A 206 706 256 HOH HOH . C 3 HOH A 207 707 230 HOH HOH . C 3 HOH A 208 708 161 HOH HOH . C 3 HOH A 209 709 273 HOH HOH . C 3 HOH A 210 710 242 HOH HOH . C 3 HOH A 211 711 59 HOH HOH . C 3 HOH A 212 712 236 HOH HOH . C 3 HOH A 213 713 195 HOH HOH . C 3 HOH A 214 714 55 HOH HOH . C 3 HOH A 215 715 178 HOH HOH . C 3 HOH A 216 716 246 HOH HOH . C 3 HOH A 217 717 211 HOH HOH . C 3 HOH A 218 718 159 HOH HOH . C 3 HOH A 219 719 183 HOH HOH . C 3 HOH A 220 720 53 HOH HOH . C 3 HOH A 221 721 123 HOH HOH . C 3 HOH A 222 722 158 HOH HOH . C 3 HOH A 223 723 153 HOH HOH . C 3 HOH A 224 724 243 HOH HOH . C 3 HOH A 225 725 149 HOH HOH . C 3 HOH A 226 726 179 HOH HOH . C 3 HOH A 227 727 66 HOH HOH . C 3 HOH A 228 728 116 HOH HOH . C 3 HOH A 229 729 224 HOH HOH . C 3 HOH A 230 730 103 HOH HOH . C 3 HOH A 231 731 232 HOH HOH . C 3 HOH A 232 732 114 HOH HOH . C 3 HOH A 233 733 233 HOH HOH . C 3 HOH A 234 734 126 HOH HOH . C 3 HOH A 235 735 105 HOH HOH . C 3 HOH A 236 736 110 HOH HOH . C 3 HOH A 237 737 91 HOH HOH . C 3 HOH A 238 738 18 HOH HOH . C 3 HOH A 239 739 218 HOH HOH . C 3 HOH A 240 740 221 HOH HOH . C 3 HOH A 241 741 212 HOH HOH . C 3 HOH A 242 742 164 HOH HOH . C 3 HOH A 243 743 162 HOH HOH . C 3 HOH A 244 744 51 HOH HOH . C 3 HOH A 245 745 56 HOH HOH . C 3 HOH A 246 746 192 HOH HOH . C 3 HOH A 247 747 254 HOH HOH . C 3 HOH A 248 748 272 HOH HOH . C 3 HOH A 249 749 97 HOH HOH . C 3 HOH A 250 750 208 HOH HOH . C 3 HOH A 251 751 199 HOH HOH . C 3 HOH A 252 752 152 HOH HOH . C 3 HOH A 253 753 231 HOH HOH . C 3 HOH A 254 754 142 HOH HOH . C 3 HOH A 255 755 205 HOH HOH . C 3 HOH A 256 756 96 HOH HOH . C 3 HOH A 257 757 214 HOH HOH . C 3 HOH A 258 758 64 HOH HOH . C 3 HOH A 259 759 35 HOH HOH . C 3 HOH A 260 760 89 HOH HOH . C 3 HOH A 261 761 201 HOH HOH . C 3 HOH A 262 762 247 HOH HOH . C 3 HOH A 263 763 168 HOH HOH . C 3 HOH A 264 764 215 HOH HOH . C 3 HOH A 265 765 196 HOH HOH . C 3 HOH A 266 766 156 HOH HOH . C 3 HOH A 267 767 102 HOH HOH . C 3 HOH A 268 768 202 HOH HOH . C 3 HOH A 269 769 127 HOH HOH . C 3 HOH A 270 770 217 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.264 _atom_site.Cartn_y -7.704 _atom_site.Cartn_z 11.399 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.18 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 673 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #