data_5LBM # _model_server_result.job_id LgDNtmexyIHuTgpdYoKMpw _model_server_result.datetime_utc '2024-10-19 10:34:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lbm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 5LBM # _exptl.entry_id 5LBM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 30.026 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMYL GROUP' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LBM _cell.length_a 82.069 _cell.length_b 82.069 _cell.length_c 55.251 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LBM _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 70 A CYS 70 1_555 C SG CYS 70 C CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 70 B CYS 70 1_555 D SG CYS 70 D CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A SG CYS 35 A CYS 35 1_555 E C FOR . A FOR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? covale ? covale2 A C LEU 52 A LEU 52 1_555 A N MSE 53 A MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C MSE 53 A MSE 53 1_555 A N ALA 54 A ALA 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 B SG CYS 35 B CYS 35 1_555 F C FOR . B FOR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.621 ? covale ? covale5 B C LEU 52 B LEU 52 1_555 B N MSE 53 B MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 B C MSE 53 B MSE 53 1_555 B N ALA 54 B ALA 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 C N PRO 2 C PRO 2 1_555 F C FOR . B FOR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.273 ? covale ? covale8 C C LEU 52 C LEU 52 1_555 C N MSE 53 C MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 C C MSE 53 C MSE 53 1_555 C N ALA 54 C ALA 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale10 D N PRO 2 D PRO 2 1_555 E C FOR . A FOR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.267 ? covale ? covale11 D C LEU 52 D LEU 52 1_555 D N MSE 53 D MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 D C MSE 53 D MSE 53 1_555 D N ALA 54 D ALA 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C H2 O' _chem_comp.formula_weight 30.026 _chem_comp.id FOR _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMYL GROUP' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5LBM _atom_sites.fract_transf_matrix[1][1] 0.012185 _atom_sites.fract_transf_matrix[1][2] 0.007035 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01407 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018099 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FOR A 1 101 1 FOR CH2 . F 2 FOR B 1 101 2 FOR CH2 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol C _atom_site.label_atom_id C _atom_site.label_comp_id FOR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 29.03 _atom_site.Cartn_y -14.865 _atom_site.Cartn_z 15.503 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 91.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id C _atom_site.auth_comp_id FOR _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #