data_5LBR # _model_server_result.job_id rbIYEaI4nPihPp5Cr1GJZw _model_server_result.datetime_utc '2025-07-31 04:52:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lbr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5LBR # _exptl.entry_id 5LBR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.84 _cell.angle_gamma 90 _cell.entry_id 5LBR _cell.length_a 96.22 _cell.length_b 55.49 _cell.length_c 71.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LBR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 38 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 24 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CBA _struct_conn.ptnr2_label_comp_id LBV _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LBV _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.617 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5LBR _atom_sites.fract_transf_matrix[1][1] 0.010393 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000516 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013978 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LBV A 1 401 405 LBV LBV . C 3 ACT A 1 402 1 ACT ACT . D 4 HOH A 1 501 55 HOH HOH . D 4 HOH A 2 502 268 HOH HOH . D 4 HOH A 3 503 74 HOH HOH . D 4 HOH A 4 504 114 HOH HOH . D 4 HOH A 5 505 196 HOH HOH . D 4 HOH A 6 506 105 HOH HOH . D 4 HOH A 7 507 50 HOH HOH . D 4 HOH A 8 508 66 HOH HOH . D 4 HOH A 9 509 26 HOH HOH . D 4 HOH A 10 510 96 HOH HOH . D 4 HOH A 11 511 122 HOH HOH . D 4 HOH A 12 512 44 HOH HOH . D 4 HOH A 13 513 19 HOH HOH . D 4 HOH A 14 514 92 HOH HOH . D 4 HOH A 15 515 121 HOH HOH . D 4 HOH A 16 516 317 HOH HOH . D 4 HOH A 17 517 29 HOH HOH . D 4 HOH A 18 518 15 HOH HOH . D 4 HOH A 19 519 17 HOH HOH . D 4 HOH A 20 520 87 HOH HOH . D 4 HOH A 21 521 109 HOH HOH . D 4 HOH A 22 522 33 HOH HOH . D 4 HOH A 23 523 7 HOH HOH . D 4 HOH A 24 524 11 HOH HOH . D 4 HOH A 25 525 52 HOH HOH . D 4 HOH A 26 526 286 HOH HOH . D 4 HOH A 27 527 3 HOH HOH . D 4 HOH A 28 528 160 HOH HOH . D 4 HOH A 29 529 70 HOH HOH . D 4 HOH A 30 530 319 HOH HOH . D 4 HOH A 31 531 8 HOH HOH . D 4 HOH A 32 532 155 HOH HOH . D 4 HOH A 33 533 21 HOH HOH . D 4 HOH A 34 534 177 HOH HOH . D 4 HOH A 35 535 42 HOH HOH . D 4 HOH A 36 536 20 HOH HOH . D 4 HOH A 37 537 2 HOH HOH . D 4 HOH A 38 538 78 HOH HOH . D 4 HOH A 39 539 5 HOH HOH . D 4 HOH A 40 540 10 HOH HOH . D 4 HOH A 41 541 212 HOH HOH . D 4 HOH A 42 542 57 HOH HOH . D 4 HOH A 43 543 4 HOH HOH . D 4 HOH A 44 544 85 HOH HOH . D 4 HOH A 45 545 82 HOH HOH . D 4 HOH A 46 546 89 HOH HOH . D 4 HOH A 47 547 22 HOH HOH . D 4 HOH A 48 548 12 HOH HOH . D 4 HOH A 49 549 27 HOH HOH . D 4 HOH A 50 550 46 HOH HOH . D 4 HOH A 51 551 129 HOH HOH . D 4 HOH A 52 552 45 HOH HOH . D 4 HOH A 53 553 98 HOH HOH . D 4 HOH A 54 554 83 HOH HOH . D 4 HOH A 55 555 30 HOH HOH . D 4 HOH A 56 556 99 HOH HOH . D 4 HOH A 57 557 90 HOH HOH . D 4 HOH A 58 558 228 HOH HOH . D 4 HOH A 59 559 208 HOH HOH . D 4 HOH A 60 560 43 HOH HOH . D 4 HOH A 61 561 40 HOH HOH . D 4 HOH A 62 562 34 HOH HOH . D 4 HOH A 63 563 101 HOH HOH . D 4 HOH A 64 564 88 HOH HOH . D 4 HOH A 65 565 36 HOH HOH . D 4 HOH A 66 566 25 HOH HOH . D 4 HOH A 67 567 108 HOH HOH . D 4 HOH A 68 568 18 HOH HOH . D 4 HOH A 69 569 272 HOH HOH . D 4 HOH A 70 570 76 HOH HOH . D 4 HOH A 71 571 51 HOH HOH . D 4 HOH A 72 572 16 HOH HOH . D 4 HOH A 73 573 303 HOH HOH . D 4 HOH A 74 574 178 HOH HOH . D 4 HOH A 75 575 67 HOH HOH . D 4 HOH A 76 576 116 HOH HOH . D 4 HOH A 77 577 24 HOH HOH . D 4 HOH A 78 578 65 HOH HOH . D 4 HOH A 79 579 69 HOH HOH . D 4 HOH A 80 580 32 HOH HOH . D 4 HOH A 81 581 64 HOH HOH . D 4 HOH A 82 582 111 HOH HOH . D 4 HOH A 83 583 124 HOH HOH . D 4 HOH A 84 584 181 HOH HOH . D 4 HOH A 85 585 125 HOH HOH . D 4 HOH A 86 586 239 HOH HOH . D 4 HOH A 87 587 241 HOH HOH . D 4 HOH A 88 588 13 HOH HOH . D 4 HOH A 89 589 126 HOH HOH . D 4 HOH A 90 590 84 HOH HOH . D 4 HOH A 91 591 28 HOH HOH . D 4 HOH A 92 592 6 HOH HOH . D 4 HOH A 93 593 75 HOH HOH . D 4 HOH A 94 594 100 HOH HOH . D 4 HOH A 95 595 213 HOH HOH . D 4 HOH A 96 596 86 HOH HOH . D 4 HOH A 97 597 59 HOH HOH . D 4 HOH A 98 598 227 HOH HOH . D 4 HOH A 99 599 156 HOH HOH . D 4 HOH A 100 600 230 HOH HOH . D 4 HOH A 101 601 56 HOH HOH . D 4 HOH A 102 602 134 HOH HOH . D 4 HOH A 103 603 38 HOH HOH . D 4 HOH A 104 604 315 HOH HOH . D 4 HOH A 105 605 164 HOH HOH . D 4 HOH A 106 606 305 HOH HOH . D 4 HOH A 107 607 47 HOH HOH . D 4 HOH A 108 608 277 HOH HOH . D 4 HOH A 109 609 58 HOH HOH . D 4 HOH A 110 610 9 HOH HOH . D 4 HOH A 111 611 41 HOH HOH . D 4 HOH A 112 612 39 HOH HOH . D 4 HOH A 113 613 48 HOH HOH . D 4 HOH A 114 614 152 HOH HOH . D 4 HOH A 115 615 206 HOH HOH . D 4 HOH A 116 616 207 HOH HOH . D 4 HOH A 117 617 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 -13.139 4.832 1.441 1 69.91 ? C ACT 402 A 1 HETATM 2 O O ACT . . . C 3 -12.111 4.913 0.735 1 71.57 ? O ACT 402 A 1 HETATM 3 O OXT ACT . . . C 3 -13.979 3.922 1.289 1 71.81 ? OXT ACT 402 A 1 HETATM 4 C CH3 ACT . . . C 3 -13.383 5.853 2.506 1 67.64 ? CH3 ACT 402 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #