data_5LBW
#
_model_server_result.job_id            i2x9KT87gSmFf7CorX2HtQ 
_model_server_result.datetime_utc      '2024-10-10 15:20:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lbw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    5LBW 
#
_exptl.entry_id    5LBW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LBW 
_cell.length_a            57.398 
_cell.length_b            81.372 
_cell.length_c            106.403 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LBW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 174 A HIS 173 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc2 A ND1 HIS 178 A HIS 177 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc3 A O CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc4 A SG CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc5 B ND1 HIS 174 B HIS 173 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc6 B ND1 HIS 178 B HIS 177 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? 
metalc ? metalc7 B O CYS 223 B CYS 222 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc8 B SG CYS 223 B CYS 222 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5LBW 
_atom_sites.fract_transf_matrix[1][1]    0.017422 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012289 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009398 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 301 231 ZN ZN . 
D 3 FAD A 1 302 234 FAD FAD . 
E 4 V0L A 1 303 2 V0L VOL . 
F 3 FAD B 1 301 233 FAD FAD . 
G 2 ZN B 1 302 232 ZN ZN . 
H 4 V0L B 1 303 1 V0L VOL . 
I 5 HOH A 1 401 6 HOH HOH . 
I 5 HOH A 2 402 5 HOH HOH . 
I 5 HOH A 3 403 13 HOH HOH . 
I 5 HOH A 4 404 30 HOH HOH . 
I 5 HOH A 5 405 17 HOH HOH . 
I 5 HOH A 6 406 7 HOH HOH . 
I 5 HOH A 7 407 32 HOH HOH . 
I 5 HOH A 8 408 1 HOH HOH . 
I 5 HOH A 9 409 4 HOH HOH . 
I 5 HOH A 10 410 19 HOH HOH . 
I 5 HOH A 11 411 18 HOH HOH . 
I 5 HOH A 12 412 9 HOH HOH . 
I 5 HOH A 13 413 33 HOH HOH . 
I 5 HOH A 14 414 8 HOH HOH . 
I 5 HOH A 15 415 15 HOH HOH . 
I 5 HOH A 16 416 3 HOH HOH . 
I 5 HOH A 17 417 31 HOH HOH . 
I 5 HOH A 18 418 39 HOH HOH . 
I 5 HOH A 19 419 29 HOH HOH . 
J 5 HOH B 1 401 10 HOH HOH . 
J 5 HOH B 2 402 22 HOH HOH . 
J 5 HOH B 3 403 23 HOH HOH . 
J 5 HOH B 4 404 21 HOH HOH . 
J 5 HOH B 5 405 16 HOH HOH . 
J 5 HOH B 6 406 11 HOH HOH . 
J 5 HOH B 7 407 37 HOH HOH . 
J 5 HOH B 8 408 25 HOH HOH . 
J 5 HOH B 9 409 26 HOH HOH . 
J 5 HOH B 10 410 35 HOH HOH . 
J 5 HOH B 11 411 2 HOH HOH . 
J 5 HOH B 12 412 12 HOH HOH . 
J 5 HOH B 13 413 27 HOH HOH . 
J 5 HOH B 14 414 38 HOH HOH . 
J 5 HOH B 15 415 20 HOH HOH . 
J 5 HOH B 16 416 14 HOH HOH . 
J 5 HOH B 17 417 34 HOH HOH . 
J 5 HOH B 18 418 24 HOH HOH . 
J 5 HOH B 19 419 28 HOH HOH . 
J 5 HOH B 20 420 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 3 4.523 -1.133 4.554 1 40.18 ? PA FAD 302 A 1 
HETATM 2 O O1A FAD . . . D 3 5.297 -0.843 5.815 1 40.53 ? O1A FAD 302 A 1 
HETATM 3 O O2A FAD . . . D 3 3.679 -0.047 3.939 1 41.3 ? O2A FAD 302 A 1 
HETATM 4 O O5B FAD . . . D 3 5.458 -1.713 3.381 1 41.17 ? O5B FAD 302 A 1 
HETATM 5 C C5B FAD . . . D 3 6.804 -2.148 3.557 1 41.81 ? C5B FAD 302 A 1 
HETATM 6 C C4B FAD . . . D 3 7.649 -1.595 2.413 1 42.34 ? C4B FAD 302 A 1 
HETATM 7 O O4B FAD . . . D 3 7.105 -1.936 1.125 1 42.01 ? O4B FAD 302 A 1 
HETATM 8 C C3B FAD . . . D 3 7.73 -0.069 2.431 1 42.64 ? C3B FAD 302 A 1 
HETATM 9 O O3B FAD . . . D 3 9.103 0.332 2.385 1 43.75 ? O3B FAD 302 A 1 
HETATM 10 C C2B FAD . . . D 3 6.98 0.37 1.182 1 42.49 ? C2B FAD 302 A 1 
HETATM 11 O O2B FAD . . . D 3 7.425 1.602 0.595 1 42.26 ? O2B FAD 302 A 1 
HETATM 12 C C1B FAD . . . D 3 7.264 -0.8 0.263 1 41.94 ? C1B FAD 302 A 1 
HETATM 13 N N9A FAD . . . D 3 6.439 -0.842 -0.975 1 41.66 ? N9A FAD 302 A 1 
HETATM 14 C C8A FAD . . . D 3 5.232 -0.285 -1.209 1 41.69 ? C8A FAD 302 A 1 
HETATM 15 N N7A FAD . . . D 3 4.815 -0.552 -2.473 1 41 ? N7A FAD 302 A 1 
HETATM 16 C C5A FAD . . . D 3 5.762 -1.287 -3.066 1 41.2 ? C5A FAD 302 A 1 
HETATM 17 C C6A FAD . . . D 3 5.964 -1.908 -4.392 1 41.34 ? C6A FAD 302 A 1 
HETATM 18 N N6A FAD . . . D 3 5.032 -1.785 -5.36 1 41.72 ? N6A FAD 302 A 1 
HETATM 19 N N1A FAD . . . D 3 7.11 -2.601 -4.605 1 41.77 ? N1A FAD 302 A 1 
HETATM 20 C C2A FAD . . . D 3 8.058 -2.736 -3.65 1 41.51 ? C2A FAD 302 A 1 
HETATM 21 N N3A FAD . . . D 3 7.932 -2.193 -2.424 1 41.28 ? N3A FAD 302 A 1 
HETATM 22 C C4A FAD . . . D 3 6.834 -1.472 -2.079 1 41.36 ? C4A FAD 302 A 1 
HETATM 23 N N1 FAD . . . D 3 1.424 -8.579 12.158 1 37.23 ? N1 FAD 302 A 1 
HETATM 24 C C2 FAD . . . D 3 1.193 -9.899 12.42 1 37.1 ? C2 FAD 302 A 1 
HETATM 25 O O2 FAD . . . D 3 1.844 -10.763 11.778 1 37.18 ? O2 FAD 302 A 1 
HETATM 26 N N3 FAD . . . D 3 0.287 -10.299 13.341 1 36.57 ? N3 FAD 302 A 1 
HETATM 27 C C4 FAD . . . D 3 -0.448 -9.425 14.05 1 36.44 ? C4 FAD 302 A 1 
HETATM 28 O O4 FAD . . . D 3 -1.276 -9.814 14.902 1 35.87 ? O4 FAD 302 A 1 
HETATM 29 C C4X FAD . . . D 3 -0.246 -7.974 13.827 1 36.64 ? C4X FAD 302 A 1 
HETATM 30 N N5 FAD . . . D 3 -0.947 -7.043 14.517 1 37 ? N5 FAD 302 A 1 
HETATM 31 C C5X FAD . . . D 3 -0.758 -5.719 14.3 1 37.3 ? C5X FAD 302 A 1 
HETATM 32 C C6 FAD . . . D 3 -1.513 -4.815 15.039 1 37.4 ? C6 FAD 302 A 1 
HETATM 33 C C7 FAD . . . D 3 -1.362 -3.443 14.853 1 37.52 ? C7 FAD 302 A 1 
HETATM 34 C C7M FAD . . . D 3 -2.189 -2.474 15.659 1 37.31 ? C7M FAD 302 A 1 
HETATM 35 C C8 FAD . . . D 3 -0.383 -2.946 13.85 1 37.92 ? C8 FAD 302 A 1 
HETATM 36 C C8M FAD . . . D 3 -0.201 -1.466 13.632 1 37.84 ? C8M FAD 302 A 1 
HETATM 37 C C9 FAD . . . D 3 0.376 -3.855 13.107 1 37.61 ? C9 FAD 302 A 1 
HETATM 38 C C9A FAD . . . D 3 0.234 -5.24 13.285 1 37.22 ? C9A FAD 302 A 1 
HETATM 39 N N10 FAD . . . D 3 0.982 -6.21 12.553 1 36.89 ? N10 FAD 302 A 1 
HETATM 40 C C10 FAD . . . D 3 0.761 -7.584 12.808 1 36.76 ? C10 FAD 302 A 1 
HETATM 41 C C1' FAD . . . D 3 1.969 -5.814 11.542 1 37.04 ? C1' FAD 302 A 1 
HETATM 42 C C2' FAD . . . D 3 1.261 -5.483 10.233 1 37.35 ? C2' FAD 302 A 1 
HETATM 43 O O2' FAD . . . D 3 0.483 -6.608 9.777 1 37.46 ? O2' FAD 302 A 1 
HETATM 44 C C3' FAD . . . D 3 2.276 -5.07 9.172 1 37.55 ? C3' FAD 302 A 1 
HETATM 45 O O3' FAD . . . D 3 2.991 -3.918 9.632 1 37.65 ? O3' FAD 302 A 1 
HETATM 46 C C4' FAD . . . D 3 1.588 -4.729 7.86 1 37.9 ? C4' FAD 302 A 1 
HETATM 47 O O4' FAD . . . D 3 0.868 -5.867 7.37 1 37.93 ? O4' FAD 302 A 1 
HETATM 48 C C5' FAD . . . D 3 2.578 -4.299 6.792 1 38.45 ? C5' FAD 302 A 1 
HETATM 49 O O5' FAD . . . D 3 1.822 -3.842 5.677 1 39.04 ? O5' FAD 302 A 1 
HETATM 50 P P FAD . . . D 3 2.042 -2.368 5.112 1 39.75 ? P FAD 302 A 1 
HETATM 51 O O1P FAD . . . D 3 1.263 -2.255 3.825 1 39.37 ? O1P FAD 302 A 1 
HETATM 52 O O2P FAD . . . D 3 1.82 -1.408 6.248 1 39.8 ? O2P FAD 302 A 1 
HETATM 53 O O3P FAD . . . D 3 3.615 -2.434 4.789 1 40.58 ? O3P FAD 302 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           53 
#