data_5LCD
#
_model_server_result.job_id            7j-MDxhreit0vFCR-Vqd7g 
_model_server_result.datetime_utc      '2024-10-20 00:51:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lcd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":304}' 
#
_entry.id    5LCD 
#
_exptl.entry_id    5LCD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LCD 
_cell.length_a            164.441 
_cell.length_b            164.441 
_cell.length_c            95.044 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LCD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 S N N 
? 4 T N N 
? 4 W N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            P 
_struct_conn.ptnr1_label_atom_id            O1P 
_struct_conn.ptnr1_label_comp_id            AMP 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             C 
_struct_conn.ptnr1_auth_comp_id             AMP 
_struct_conn.ptnr1_auth_seq_id              301 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            Q 
_struct_conn.ptnr2_label_atom_id            MG 
_struct_conn.ptnr2_label_comp_id            MG 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             C 
_struct_conn.ptnr2_auth_comp_id             MG 
_struct_conn.ptnr2_auth_seq_id              302 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.169 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 320 n n 
S O2 SO4 doub 321 n n 
S O3 SO4 sing 322 n n 
S O4 SO4 sing 323 n n 
#
_atom_sites.entry_id                     5LCD 
_atom_sites.fract_transf_matrix[1][1]    0.006081 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006081 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010521 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP A 1 301 500 AMP AMP . 
F 3 PO4 A 1 302 1 PO4 PO4 . 
G 4 SO4 A 1 303 1 SO4 SO4 . 
H 4 SO4 A 1 304 4 SO4 SO4 . 
I 4 SO4 A 1 305 5 SO4 SO4 . 
J 4 SO4 A 1 306 10 SO4 SO4 . 
K 2 AMP B 1 301 500 AMP AMP . 
L 3 PO4 B 1 302 2 PO4 PO4 . 
M 4 SO4 B 1 303 3 SO4 SO4 . 
N 4 SO4 B 1 304 6 SO4 SO4 . 
O 4 SO4 B 1 305 7 SO4 SO4 . 
P 2 AMP C 1 301 500 AMP AMP . 
Q 5 MG C 1 302 501 MG MG . 
R 3 PO4 C 1 303 3 PO4 PO4 . 
S 4 SO4 C 1 304 2 SO4 SO4 . 
T 4 SO4 C 1 305 9 SO4 SO4 . 
U 2 AMP D 1 301 500 AMP AMP . 
V 3 PO4 D 1 302 4 PO4 PO4 . 
W 4 SO4 D 1 303 8 SO4 SO4 . 
X 6 HOH A 1 401 71 HOH HOH . 
X 6 HOH A 2 402 37 HOH HOH . 
X 6 HOH A 3 403 27 HOH HOH . 
X 6 HOH A 4 404 26 HOH HOH . 
X 6 HOH A 5 405 15 HOH HOH . 
X 6 HOH A 6 406 31 HOH HOH . 
X 6 HOH A 7 407 28 HOH HOH . 
X 6 HOH A 8 408 35 HOH HOH . 
X 6 HOH A 9 409 18 HOH HOH . 
X 6 HOH A 10 410 30 HOH HOH . 
X 6 HOH A 11 411 61 HOH HOH . 
X 6 HOH A 12 412 19 HOH HOH . 
X 6 HOH A 13 413 39 HOH HOH . 
X 6 HOH A 14 414 74 HOH HOH . 
X 6 HOH A 15 415 72 HOH HOH . 
X 6 HOH A 16 416 57 HOH HOH . 
X 6 HOH A 17 417 54 HOH HOH . 
X 6 HOH A 18 418 53 HOH HOH . 
X 6 HOH A 19 419 23 HOH HOH . 
X 6 HOH A 20 420 67 HOH HOH . 
X 6 HOH A 21 421 3 HOH HOH . 
X 6 HOH A 22 422 56 HOH HOH . 
X 6 HOH A 23 423 55 HOH HOH . 
X 6 HOH A 24 424 33 HOH HOH . 
X 6 HOH A 25 425 58 HOH HOH . 
Y 6 HOH B 1 401 59 HOH HOH . 
Y 6 HOH B 2 402 32 HOH HOH . 
Y 6 HOH B 3 403 68 HOH HOH . 
Y 6 HOH B 4 404 52 HOH HOH . 
Y 6 HOH B 5 405 44 HOH HOH . 
Y 6 HOH B 6 406 60 HOH HOH . 
Y 6 HOH B 7 407 36 HOH HOH . 
Y 6 HOH B 8 408 1 HOH HOH . 
Y 6 HOH B 9 409 14 HOH HOH . 
Y 6 HOH B 10 410 20 HOH HOH . 
Y 6 HOH B 11 411 48 HOH HOH . 
Y 6 HOH B 12 412 16 HOH HOH . 
Y 6 HOH B 13 413 25 HOH HOH . 
Y 6 HOH B 14 414 51 HOH HOH . 
Y 6 HOH B 15 415 2 HOH HOH . 
Y 6 HOH B 16 416 70 HOH HOH . 
Y 6 HOH B 17 417 65 HOH HOH . 
Y 6 HOH B 18 418 9 HOH HOH . 
Y 6 HOH B 19 419 34 HOH HOH . 
Y 6 HOH B 20 420 6 HOH HOH . 
Y 6 HOH B 21 421 50 HOH HOH . 
Y 6 HOH B 22 422 12 HOH HOH . 
Y 6 HOH B 23 423 4 HOH HOH . 
Y 6 HOH B 24 424 63 HOH HOH . 
Y 6 HOH B 25 425 62 HOH HOH . 
Y 6 HOH B 26 426 69 HOH HOH . 
Z 6 HOH C 1 401 5 HOH HOH . 
Z 6 HOH C 2 402 7 HOH HOH . 
Z 6 HOH C 3 403 8 HOH HOH . 
Z 6 HOH C 4 404 38 HOH HOH . 
Z 6 HOH C 5 405 24 HOH HOH . 
Z 6 HOH C 6 406 76 HOH HOH . 
Z 6 HOH C 7 407 43 HOH HOH . 
Z 6 HOH C 8 408 10 HOH HOH . 
Z 6 HOH C 9 409 47 HOH HOH . 
Z 6 HOH C 10 410 29 HOH HOH . 
Z 6 HOH C 11 411 46 HOH HOH . 
Z 6 HOH C 12 412 13 HOH HOH . 
Z 6 HOH C 13 413 11 HOH HOH . 
Z 6 HOH C 14 414 42 HOH HOH . 
Z 6 HOH C 15 415 64 HOH HOH . 
AA 6 HOH D 1 401 17 HOH HOH . 
AA 6 HOH D 2 402 49 HOH HOH . 
AA 6 HOH D 3 403 45 HOH HOH . 
AA 6 HOH D 4 404 75 HOH HOH . 
AA 6 HOH D 5 405 66 HOH HOH . 
AA 6 HOH D 6 406 73 HOH HOH . 
AA 6 HOH D 7 407 21 HOH HOH . 
AA 6 HOH D 8 408 41 HOH HOH . 
AA 6 HOH D 9 409 40 HOH HOH . 
AA 6 HOH D 10 410 22 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . N 4 -57.23 -22.227 -25.722 1 101.66 ? S SO4 304 B 1 
HETATM 2 O O1 SO4 . . . N 4 -57.269 -23.404 -26.589 1 102.35 ? O1 SO4 304 B 1 
HETATM 3 O O2 SO4 . . . N 4 -58.325 -21.324 -26.084 1 100.87 ? O2 SO4 304 B 1 
HETATM 4 O O3 SO4 . . . N 4 -55.938 -21.548 -25.88 1 101.62 ? O3 SO4 304 B 1 
HETATM 5 O O4 SO4 . . . N 4 -57.374 -22.654 -24.33 1 101.97 ? O4 SO4 304 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#