data_5LDR
#
_model_server_result.job_id            a3ONzYPjEWZZOwFoOep3bQ 
_model_server_result.datetime_utc      '2025-07-01 20:06:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ldr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":801}' 
#
_entry.id    5LDR 
#
_exptl.entry_id    5LDR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-D-galactopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LDR 
_cell.length_a            79.26 
_cell.length_b            107.58 
_cell.length_c            201.55 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LDR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 H N N 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                GAL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-D-galactopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-D-galactose;D-galactose;galactose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GAL sing 89 n n 
C1 O1 GAL sing 90 n n 
C1 O5 GAL sing 91 n n 
C1 H1 GAL sing 92 n n 
C2 C3 GAL sing 93 n n 
C2 O2 GAL sing 94 n n 
C2 H2 GAL sing 95 n n 
C3 C4 GAL sing 96 n n 
C3 O3 GAL sing 97 n n 
C3 H3 GAL sing 98 n n 
C4 C5 GAL sing 99 n n 
C4 O4 GAL sing 100 n n 
C4 H4 GAL sing 101 n n 
C5 C6 GAL sing 102 n n 
C5 O5 GAL sing 103 n n 
C5 H5 GAL sing 104 n n 
C6 O6 GAL sing 105 n n 
C6 H61 GAL sing 106 n n 
C6 H62 GAL sing 107 n n 
O1 HO1 GAL sing 108 n n 
O2 HO2 GAL sing 109 n n 
O3 HO3 GAL sing 110 n n 
O4 HO4 GAL sing 111 n n 
O6 HO6 GAL sing 112 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
GAL b-D-galactopyranose 'COMMON NAME' GMML 1 
GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     5LDR 
_atom_sites.fract_transf_matrix[1][1]    0.012617 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009295 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004962 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GAL A 1 801 1 GAL GAL . 
D 4 GLC A 1 802 1 GLC GLC . 
E 5 PEG A 1 803 1 PEG PEG . 
F 6 CL A 1 804 2 CL CL . 
G 6 CL A 1 805 4 CL CL . 
H 3 GAL B 1 801 2 GAL GAL . 
I 5 PEG B 1 802 3 PEG PEG . 
J 5 PEG B 1 803 4 PEG PEG . 
K 5 PEG B 1 804 6 PEG PEG . 
L 5 PEG B 1 805 7 PEG PEG . 
M 6 CL B 1 806 1 CL CL . 
N 6 CL B 1 807 3 CL CL . 
O 7 ACT B 1 808 1 ACT ACT . 
P 7 ACT B 1 809 3 ACT ACT . 
Q 8 HOH A 1 901 18 HOH HOH . 
Q 8 HOH A 2 902 100 HOH HOH . 
Q 8 HOH A 3 903 48 HOH HOH . 
Q 8 HOH A 4 904 39 HOH HOH . 
Q 8 HOH A 5 905 15 HOH HOH . 
Q 8 HOH A 6 906 75 HOH HOH . 
Q 8 HOH A 7 907 82 HOH HOH . 
Q 8 HOH A 8 908 8 HOH HOH . 
Q 8 HOH A 9 909 22 HOH HOH . 
Q 8 HOH A 10 910 109 HOH HOH . 
Q 8 HOH A 11 911 64 HOH HOH . 
Q 8 HOH A 12 912 45 HOH HOH . 
Q 8 HOH A 13 913 70 HOH HOH . 
Q 8 HOH A 14 914 33 HOH HOH . 
Q 8 HOH A 15 915 17 HOH HOH . 
Q 8 HOH A 16 916 83 HOH HOH . 
Q 8 HOH A 17 917 25 HOH HOH . 
Q 8 HOH A 18 918 38 HOH HOH . 
Q 8 HOH A 19 919 37 HOH HOH . 
Q 8 HOH A 20 920 89 HOH HOH . 
Q 8 HOH A 21 921 6 HOH HOH . 
Q 8 HOH A 22 922 81 HOH HOH . 
Q 8 HOH A 23 923 24 HOH HOH . 
Q 8 HOH A 24 924 26 HOH HOH . 
Q 8 HOH A 25 925 23 HOH HOH . 
Q 8 HOH A 26 926 104 HOH HOH . 
Q 8 HOH A 27 927 44 HOH HOH . 
Q 8 HOH A 28 928 40 HOH HOH . 
Q 8 HOH A 29 929 68 HOH HOH . 
Q 8 HOH A 30 930 60 HOH HOH . 
Q 8 HOH A 31 931 57 HOH HOH . 
Q 8 HOH A 32 932 78 HOH HOH . 
Q 8 HOH A 33 933 91 HOH HOH . 
Q 8 HOH A 34 934 73 HOH HOH . 
Q 8 HOH A 35 935 1 HOH HOH . 
Q 8 HOH A 36 936 111 HOH HOH . 
Q 8 HOH A 37 937 54 HOH HOH . 
Q 8 HOH A 38 938 88 HOH HOH . 
Q 8 HOH A 39 939 97 HOH HOH . 
Q 8 HOH A 40 940 5 HOH HOH . 
Q 8 HOH A 41 941 105 HOH HOH . 
Q 8 HOH A 42 942 103 HOH HOH . 
Q 8 HOH A 43 943 42 HOH HOH . 
Q 8 HOH A 44 944 27 HOH HOH . 
Q 8 HOH A 45 945 106 HOH HOH . 
Q 8 HOH A 46 946 59 HOH HOH . 
Q 8 HOH A 47 947 95 HOH HOH . 
Q 8 HOH A 48 948 67 HOH HOH . 
Q 8 HOH A 49 949 32 HOH HOH . 
Q 8 HOH A 50 950 4 HOH HOH . 
Q 8 HOH A 51 951 7 HOH HOH . 
Q 8 HOH A 52 952 30 HOH HOH . 
Q 8 HOH A 53 953 53 HOH HOH . 
Q 8 HOH A 54 954 113 HOH HOH . 
Q 8 HOH A 55 955 112 HOH HOH . 
Q 8 HOH A 56 956 77 HOH HOH . 
Q 8 HOH A 57 957 52 HOH HOH . 
Q 8 HOH A 58 958 108 HOH HOH . 
Q 8 HOH A 59 959 47 HOH HOH . 
Q 8 HOH A 60 960 94 HOH HOH . 
Q 8 HOH A 61 961 63 HOH HOH . 
Q 8 HOH A 62 962 51 HOH HOH . 
Q 8 HOH A 63 963 72 HOH HOH . 
Q 8 HOH A 64 964 71 HOH HOH . 
Q 8 HOH A 65 965 107 HOH HOH . 
Q 8 HOH A 66 966 76 HOH HOH . 
R 8 HOH B 1 901 29 HOH HOH . 
R 8 HOH B 2 902 69 HOH HOH . 
R 8 HOH B 3 903 2 HOH HOH . 
R 8 HOH B 4 904 79 HOH HOH . 
R 8 HOH B 5 905 9 HOH HOH . 
R 8 HOH B 6 906 74 HOH HOH . 
R 8 HOH B 7 907 65 HOH HOH . 
R 8 HOH B 8 908 16 HOH HOH . 
R 8 HOH B 9 909 87 HOH HOH . 
R 8 HOH B 10 910 35 HOH HOH . 
R 8 HOH B 11 911 49 HOH HOH . 
R 8 HOH B 12 912 43 HOH HOH . 
R 8 HOH B 13 913 114 HOH HOH . 
R 8 HOH B 14 914 86 HOH HOH . 
R 8 HOH B 15 915 10 HOH HOH . 
R 8 HOH B 16 916 101 HOH HOH . 
R 8 HOH B 17 917 99 HOH HOH . 
R 8 HOH B 18 918 11 HOH HOH . 
R 8 HOH B 19 919 34 HOH HOH . 
R 8 HOH B 20 920 66 HOH HOH . 
R 8 HOH B 21 921 3 HOH HOH . 
R 8 HOH B 22 922 36 HOH HOH . 
R 8 HOH B 23 923 102 HOH HOH . 
R 8 HOH B 24 924 55 HOH HOH . 
R 8 HOH B 25 925 46 HOH HOH . 
R 8 HOH B 26 926 41 HOH HOH . 
R 8 HOH B 27 927 56 HOH HOH . 
R 8 HOH B 28 928 19 HOH HOH . 
R 8 HOH B 29 929 13 HOH HOH . 
R 8 HOH B 30 930 28 HOH HOH . 
R 8 HOH B 31 931 85 HOH HOH . 
R 8 HOH B 32 932 80 HOH HOH . 
R 8 HOH B 33 933 84 HOH HOH . 
R 8 HOH B 34 934 110 HOH HOH . 
R 8 HOH B 35 935 12 HOH HOH . 
R 8 HOH B 36 936 98 HOH HOH . 
R 8 HOH B 37 937 90 HOH HOH . 
R 8 HOH B 38 938 21 HOH HOH . 
R 8 HOH B 39 939 61 HOH HOH . 
R 8 HOH B 40 940 14 HOH HOH . 
R 8 HOH B 41 941 96 HOH HOH . 
R 8 HOH B 42 942 58 HOH HOH . 
R 8 HOH B 43 943 93 HOH HOH . 
R 8 HOH B 44 944 20 HOH HOH . 
R 8 HOH B 45 945 92 HOH HOH . 
R 8 HOH B 46 946 31 HOH HOH . 
R 8 HOH B 47 947 50 HOH HOH . 
R 8 HOH B 48 948 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GAL . . . C 3 36.159 71.819 88.418 1 73.5 ? C1 GAL 801 A 1 
HETATM 2 C C2 GAL . . . C 3 36.565 73.287 88.713 1 72.12 ? C2 GAL 801 A 1 
HETATM 3 C C3 GAL . . . C 3 36.999 73.951 87.369 1 75.98 ? C3 GAL 801 A 1 
HETATM 4 C C4 GAL . . . C 3 38.071 73.054 86.749 1 79.23 ? C4 GAL 801 A 1 
HETATM 5 C C5 GAL . . . C 3 37.513 71.663 86.463 1 79.92 ? C5 GAL 801 A 1 
HETATM 6 C C6 GAL . . . C 3 38.472 70.788 85.627 1 77.82 ? C6 GAL 801 A 1 
HETATM 7 O O1 GAL . . . C 3 35.67 71.046 89.544 1 66.17 ? O1 GAL 801 A 1 
HETATM 8 O O2 GAL . . . C 3 35.456 73.981 89.31 1 68.27 ? O2 GAL 801 A 1 
HETATM 9 O O3 GAL . . . C 3 37.526 75.313 87.33 1 71.15 ? O3 GAL 801 A 1 
HETATM 10 O O4 GAL . . . C 3 39.181 72.935 87.65 1 76.14 ? O4 GAL 801 A 1 
HETATM 11 O O5 GAL . . . C 3 37.215 71.109 87.761 1 77.52 ? O5 GAL 801 A 1 
HETATM 12 O O6 GAL . . . C 3 37.752 69.695 85.019 1 75.17 ? O6 GAL 801 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           12 
#