data_5LFO
#
_model_server_result.job_id            GhiX6MCy06kLfdh2GG4tZQ 
_model_server_result.datetime_utc      '2024-11-22 22:53:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lfo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1803}' 
#
_entry.id    5LFO 
#
_exptl.entry_id    5LFO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5LFO 
_cell.length_a            122.292 
_cell.length_b            122.292 
_cell.length_c            54.862 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LFO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 220 n n 
C1 C2 GOL sing 221 n n 
C1 H11 GOL sing 222 n n 
C1 H12 GOL sing 223 n n 
O1 HO1 GOL sing 224 n n 
C2 O2 GOL sing 225 n n 
C2 C3 GOL sing 226 n n 
C2 H2 GOL sing 227 n n 
O2 HO2 GOL sing 228 n n 
C3 O3 GOL sing 229 n n 
C3 H31 GOL sing 230 n n 
C3 H32 GOL sing 231 n n 
O3 HO3 GOL sing 232 n n 
#
_atom_sites.entry_id                     5LFO 
_atom_sites.fract_transf_matrix[1][1]    0.008177 
_atom_sites.fract_transf_matrix[1][2]    0.004721 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009442 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018228 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD A 1 1801 1801 FAD FAD . 
C 3 SP5 A 1 1802 1 SP5 INH . 
D 4 GOL A 1 1803 1 GOL GOL . 
E 5 HOH A 1 1901 169 HOH HOH . 
E 5 HOH A 2 1902 28 HOH HOH . 
E 5 HOH A 3 1903 129 HOH HOH . 
E 5 HOH A 4 1904 61 HOH HOH . 
E 5 HOH A 5 1905 118 HOH HOH . 
E 5 HOH A 6 1906 46 HOH HOH . 
E 5 HOH A 7 1907 190 HOH HOH . 
E 5 HOH A 8 1908 191 HOH HOH . 
E 5 HOH A 9 1909 292 HOH HOH . 
E 5 HOH A 10 1910 130 HOH HOH . 
E 5 HOH A 11 1911 151 HOH HOH . 
E 5 HOH A 12 1912 57 HOH HOH . 
E 5 HOH A 13 1913 59 HOH HOH . 
E 5 HOH A 14 1914 150 HOH HOH . 
E 5 HOH A 15 1915 248 HOH HOH . 
E 5 HOH A 16 1916 106 HOH HOH . 
E 5 HOH A 17 1917 145 HOH HOH . 
E 5 HOH A 18 1918 201 HOH HOH . 
E 5 HOH A 19 1919 243 HOH HOH . 
E 5 HOH A 20 1920 38 HOH HOH . 
E 5 HOH A 21 1921 60 HOH HOH . 
E 5 HOH A 22 1922 49 HOH HOH . 
E 5 HOH A 23 1923 242 HOH HOH . 
E 5 HOH A 24 1924 275 HOH HOH . 
E 5 HOH A 25 1925 225 HOH HOH . 
E 5 HOH A 26 1926 210 HOH HOH . 
E 5 HOH A 27 1927 175 HOH HOH . 
E 5 HOH A 28 1928 279 HOH HOH . 
E 5 HOH A 29 1929 27 HOH HOH . 
E 5 HOH A 30 1930 45 HOH HOH . 
E 5 HOH A 31 1931 194 HOH HOH . 
E 5 HOH A 32 1932 67 HOH HOH . 
E 5 HOH A 33 1933 186 HOH HOH . 
E 5 HOH A 34 1934 227 HOH HOH . 
E 5 HOH A 35 1935 68 HOH HOH . 
E 5 HOH A 36 1936 64 HOH HOH . 
E 5 HOH A 37 1937 5 HOH HOH . 
E 5 HOH A 38 1938 51 HOH HOH . 
E 5 HOH A 39 1939 197 HOH HOH . 
E 5 HOH A 40 1940 155 HOH HOH . 
E 5 HOH A 41 1941 2 HOH HOH . 
E 5 HOH A 42 1942 189 HOH HOH . 
E 5 HOH A 43 1943 70 HOH HOH . 
E 5 HOH A 44 1944 258 HOH HOH . 
E 5 HOH A 45 1945 276 HOH HOH . 
E 5 HOH A 46 1946 66 HOH HOH . 
E 5 HOH A 47 1947 229 HOH HOH . 
E 5 HOH A 48 1948 109 HOH HOH . 
E 5 HOH A 49 1949 43 HOH HOH . 
E 5 HOH A 50 1950 222 HOH HOH . 
E 5 HOH A 51 1951 255 HOH HOH . 
E 5 HOH A 52 1952 91 HOH HOH . 
E 5 HOH A 53 1953 18 HOH HOH . 
E 5 HOH A 54 1954 254 HOH HOH . 
E 5 HOH A 55 1955 140 HOH HOH . 
E 5 HOH A 56 1956 207 HOH HOH . 
E 5 HOH A 57 1957 226 HOH HOH . 
E 5 HOH A 58 1958 32 HOH HOH . 
E 5 HOH A 59 1959 33 HOH HOH . 
E 5 HOH A 60 1960 141 HOH HOH . 
E 5 HOH A 61 1961 250 HOH HOH . 
E 5 HOH A 62 1962 116 HOH HOH . 
E 5 HOH A 63 1963 289 HOH HOH . 
E 5 HOH A 64 1964 196 HOH HOH . 
E 5 HOH A 65 1965 16 HOH HOH . 
E 5 HOH A 66 1966 85 HOH HOH . 
E 5 HOH A 67 1967 246 HOH HOH . 
E 5 HOH A 68 1968 281 HOH HOH . 
E 5 HOH A 69 1969 4 HOH HOH . 
E 5 HOH A 70 1970 122 HOH HOH . 
E 5 HOH A 71 1971 15 HOH HOH . 
E 5 HOH A 72 1972 232 HOH HOH . 
E 5 HOH A 73 1973 112 HOH HOH . 
E 5 HOH A 74 1974 159 HOH HOH . 
E 5 HOH A 75 1975 257 HOH HOH . 
E 5 HOH A 76 1976 40 HOH HOH . 
E 5 HOH A 77 1977 14 HOH HOH . 
E 5 HOH A 78 1978 200 HOH HOH . 
E 5 HOH A 79 1979 20 HOH HOH . 
E 5 HOH A 80 1980 193 HOH HOH . 
E 5 HOH A 81 1981 231 HOH HOH . 
E 5 HOH A 82 1982 244 HOH HOH . 
E 5 HOH A 83 1983 166 HOH HOH . 
E 5 HOH A 84 1984 12 HOH HOH . 
E 5 HOH A 85 1985 247 HOH HOH . 
E 5 HOH A 86 1986 48 HOH HOH . 
E 5 HOH A 87 1987 44 HOH HOH . 
E 5 HOH A 88 1988 127 HOH HOH . 
E 5 HOH A 89 1989 195 HOH HOH . 
E 5 HOH A 90 1990 131 HOH HOH . 
E 5 HOH A 91 1991 86 HOH HOH . 
E 5 HOH A 92 1992 84 HOH HOH . 
E 5 HOH A 93 1993 77 HOH HOH . 
E 5 HOH A 94 1994 223 HOH HOH . 
E 5 HOH A 95 1995 173 HOH HOH . 
E 5 HOH A 96 1996 56 HOH HOH . 
E 5 HOH A 97 1997 238 HOH HOH . 
E 5 HOH A 98 1998 146 HOH HOH . 
E 5 HOH A 99 1999 119 HOH HOH . 
E 5 HOH A 100 2000 138 HOH HOH . 
E 5 HOH A 101 2001 108 HOH HOH . 
E 5 HOH A 102 2002 101 HOH HOH . 
E 5 HOH A 103 2003 93 HOH HOH . 
E 5 HOH A 104 2004 55 HOH HOH . 
E 5 HOH A 105 2005 114 HOH HOH . 
E 5 HOH A 106 2006 39 HOH HOH . 
E 5 HOH A 107 2007 89 HOH HOH . 
E 5 HOH A 108 2008 23 HOH HOH . 
E 5 HOH A 109 2009 137 HOH HOH . 
E 5 HOH A 110 2010 204 HOH HOH . 
E 5 HOH A 111 2011 161 HOH HOH . 
E 5 HOH A 112 2012 239 HOH HOH . 
E 5 HOH A 113 2013 9 HOH HOH . 
E 5 HOH A 114 2014 26 HOH HOH . 
E 5 HOH A 115 2015 88 HOH HOH . 
E 5 HOH A 116 2016 209 HOH HOH . 
E 5 HOH A 117 2017 58 HOH HOH . 
E 5 HOH A 118 2018 184 HOH HOH . 
E 5 HOH A 119 2019 72 HOH HOH . 
E 5 HOH A 120 2020 148 HOH HOH . 
E 5 HOH A 121 2021 270 HOH HOH . 
E 5 HOH A 122 2022 123 HOH HOH . 
E 5 HOH A 123 2023 63 HOH HOH . 
E 5 HOH A 124 2024 62 HOH HOH . 
E 5 HOH A 125 2025 139 HOH HOH . 
E 5 HOH A 126 2026 22 HOH HOH . 
E 5 HOH A 127 2027 94 HOH HOH . 
E 5 HOH A 128 2028 192 HOH HOH . 
E 5 HOH A 129 2029 37 HOH HOH . 
E 5 HOH A 130 2030 167 HOH HOH . 
E 5 HOH A 131 2031 268 HOH HOH . 
E 5 HOH A 132 2032 11 HOH HOH . 
E 5 HOH A 133 2033 261 HOH HOH . 
E 5 HOH A 134 2034 219 HOH HOH . 
E 5 HOH A 135 2035 125 HOH HOH . 
E 5 HOH A 136 2036 234 HOH HOH . 
E 5 HOH A 137 2037 273 HOH HOH . 
E 5 HOH A 138 2038 221 HOH HOH . 
E 5 HOH A 139 2039 126 HOH HOH . 
E 5 HOH A 140 2040 29 HOH HOH . 
E 5 HOH A 141 2041 134 HOH HOH . 
E 5 HOH A 142 2042 8 HOH HOH . 
E 5 HOH A 143 2043 267 HOH HOH . 
E 5 HOH A 144 2044 74 HOH HOH . 
E 5 HOH A 145 2045 152 HOH HOH . 
E 5 HOH A 146 2046 252 HOH HOH . 
E 5 HOH A 147 2047 17 HOH HOH . 
E 5 HOH A 148 2048 198 HOH HOH . 
E 5 HOH A 149 2049 10 HOH HOH . 
E 5 HOH A 150 2050 170 HOH HOH . 
E 5 HOH A 151 2051 24 HOH HOH . 
E 5 HOH A 152 2052 216 HOH HOH . 
E 5 HOH A 153 2053 3 HOH HOH . 
E 5 HOH A 154 2054 21 HOH HOH . 
E 5 HOH A 155 2055 107 HOH HOH . 
E 5 HOH A 156 2056 266 HOH HOH . 
E 5 HOH A 157 2057 237 HOH HOH . 
E 5 HOH A 158 2058 224 HOH HOH . 
E 5 HOH A 159 2059 111 HOH HOH . 
E 5 HOH A 160 2060 35 HOH HOH . 
E 5 HOH A 161 2061 212 HOH HOH . 
E 5 HOH A 162 2062 135 HOH HOH . 
E 5 HOH A 163 2063 92 HOH HOH . 
E 5 HOH A 164 2064 75 HOH HOH . 
E 5 HOH A 165 2065 271 HOH HOH . 
E 5 HOH A 166 2066 54 HOH HOH . 
E 5 HOH A 167 2067 25 HOH HOH . 
E 5 HOH A 168 2068 206 HOH HOH . 
E 5 HOH A 169 2069 263 HOH HOH . 
E 5 HOH A 170 2070 214 HOH HOH . 
E 5 HOH A 171 2071 269 HOH HOH . 
E 5 HOH A 172 2072 65 HOH HOH . 
E 5 HOH A 173 2073 78 HOH HOH . 
E 5 HOH A 174 2074 53 HOH HOH . 
E 5 HOH A 175 2075 199 HOH HOH . 
E 5 HOH A 176 2076 251 HOH HOH . 
E 5 HOH A 177 2077 165 HOH HOH . 
E 5 HOH A 178 2078 42 HOH HOH . 
E 5 HOH A 179 2079 142 HOH HOH . 
E 5 HOH A 180 2080 6 HOH HOH . 
E 5 HOH A 181 2081 215 HOH HOH . 
E 5 HOH A 182 2082 236 HOH HOH . 
E 5 HOH A 183 2083 177 HOH HOH . 
E 5 HOH A 184 2084 117 HOH HOH . 
E 5 HOH A 185 2085 69 HOH HOH . 
E 5 HOH A 186 2086 282 HOH HOH . 
E 5 HOH A 187 2087 262 HOH HOH . 
E 5 HOH A 188 2088 132 HOH HOH . 
E 5 HOH A 189 2089 13 HOH HOH . 
E 5 HOH A 190 2090 154 HOH HOH . 
E 5 HOH A 191 2091 31 HOH HOH . 
E 5 HOH A 192 2092 73 HOH HOH . 
E 5 HOH A 193 2093 162 HOH HOH . 
E 5 HOH A 194 2094 110 HOH HOH . 
E 5 HOH A 195 2095 30 HOH HOH . 
E 5 HOH A 196 2096 157 HOH HOH . 
E 5 HOH A 197 2097 143 HOH HOH . 
E 5 HOH A 198 2098 203 HOH HOH . 
E 5 HOH A 199 2099 133 HOH HOH . 
E 5 HOH A 200 2100 19 HOH HOH . 
E 5 HOH A 201 2101 218 HOH HOH . 
E 5 HOH A 202 2102 79 HOH HOH . 
E 5 HOH A 203 2103 213 HOH HOH . 
E 5 HOH A 204 2104 277 HOH HOH . 
E 5 HOH A 205 2105 50 HOH HOH . 
E 5 HOH A 206 2106 290 HOH HOH . 
E 5 HOH A 207 2107 220 HOH HOH . 
E 5 HOH A 208 2108 185 HOH HOH . 
E 5 HOH A 209 2109 179 HOH HOH . 
E 5 HOH A 210 2110 235 HOH HOH . 
E 5 HOH A 211 2111 211 HOH HOH . 
E 5 HOH A 212 2112 259 HOH HOH . 
E 5 HOH A 213 2113 241 HOH HOH . 
E 5 HOH A 214 2114 283 HOH HOH . 
E 5 HOH A 215 2115 34 HOH HOH . 
E 5 HOH A 216 2116 183 HOH HOH . 
E 5 HOH A 217 2117 230 HOH HOH . 
E 5 HOH A 218 2118 249 HOH HOH . 
E 5 HOH A 219 2119 202 HOH HOH . 
E 5 HOH A 220 2120 71 HOH HOH . 
E 5 HOH A 221 2121 100 HOH HOH . 
E 5 HOH A 222 2122 99 HOH HOH . 
E 5 HOH A 223 2123 115 HOH HOH . 
E 5 HOH A 224 2124 297 HOH HOH . 
E 5 HOH A 225 2125 47 HOH HOH . 
E 5 HOH A 226 2126 208 HOH HOH . 
E 5 HOH A 227 2127 188 HOH HOH . 
E 5 HOH A 228 2128 80 HOH HOH . 
E 5 HOH A 229 2129 149 HOH HOH . 
E 5 HOH A 230 2130 7 HOH HOH . 
E 5 HOH A 231 2131 168 HOH HOH . 
E 5 HOH A 232 2132 41 HOH HOH . 
E 5 HOH A 233 2133 260 HOH HOH . 
E 5 HOH A 234 2134 205 HOH HOH . 
E 5 HOH A 235 2135 90 HOH HOH . 
E 5 HOH A 236 2136 280 HOH HOH . 
E 5 HOH A 237 2137 82 HOH HOH . 
E 5 HOH A 238 2138 228 HOH HOH . 
E 5 HOH A 239 2139 291 HOH HOH . 
E 5 HOH A 240 2140 158 HOH HOH . 
E 5 HOH A 241 2141 156 HOH HOH . 
E 5 HOH A 242 2142 293 HOH HOH . 
E 5 HOH A 243 2143 172 HOH HOH . 
E 5 HOH A 244 2144 95 HOH HOH . 
E 5 HOH A 245 2145 288 HOH HOH . 
E 5 HOH A 246 2146 171 HOH HOH . 
E 5 HOH A 247 2147 178 HOH HOH . 
E 5 HOH A 248 2148 81 HOH HOH . 
E 5 HOH A 249 2149 278 HOH HOH . 
E 5 HOH A 250 2150 240 HOH HOH . 
E 5 HOH A 251 2151 103 HOH HOH . 
E 5 HOH A 252 2152 153 HOH HOH . 
E 5 HOH A 253 2153 97 HOH HOH . 
E 5 HOH A 254 2154 120 HOH HOH . 
E 5 HOH A 255 2155 294 HOH HOH . 
E 5 HOH A 256 2156 295 HOH HOH . 
E 5 HOH A 257 2157 217 HOH HOH . 
E 5 HOH A 258 2158 128 HOH HOH . 
E 5 HOH A 259 2159 284 HOH HOH . 
E 5 HOH A 260 2160 296 HOH HOH . 
E 5 HOH A 261 2161 182 HOH HOH . 
E 5 HOH A 262 2162 144 HOH HOH . 
E 5 HOH A 263 2163 181 HOH HOH . 
E 5 HOH A 264 2164 147 HOH HOH . 
E 5 HOH A 265 2165 253 HOH HOH . 
E 5 HOH A 266 2166 265 HOH HOH . 
E 5 HOH A 267 2167 256 HOH HOH . 
E 5 HOH A 268 2168 286 HOH HOH . 
E 5 HOH A 269 2169 287 HOH HOH . 
E 5 HOH A 270 2170 124 HOH HOH . 
E 5 HOH A 271 2171 180 HOH HOH . 
E 5 HOH A 272 2172 98 HOH HOH . 
E 5 HOH A 273 2173 113 HOH HOH . 
E 5 HOH A 274 2174 83 HOH HOH . 
E 5 HOH A 275 2175 104 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 38.727 62.42 -8.825 1 38.29 ? C1 GOL 1803 A 1 
HETATM 2 O O1 GOL . . . D 4 38.696 61.624 -10.01 1 34.92 ? O1 GOL 1803 A 1 
HETATM 3 C C2 GOL . . . D 4 37.34 62.913 -8.482 1 38.97 ? C2 GOL 1803 A 1 
HETATM 4 O O2 GOL . . . D 4 36.528 61.792 -8.111 1 35.17 ? O2 GOL 1803 A 1 
HETATM 5 C C3 GOL . . . D 4 37.37 63.92 -7.355 1 40.64 ? C3 GOL 1803 A 1 
HETATM 6 O O3 GOL . . . D 4 36.135 64.629 -7.284 1 40.2 ? O3 GOL 1803 A 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#