data_5LGT
#
_model_server_result.job_id            6-tWos_Fdh4nLXi-tG8-1g 
_model_server_result.datetime_utc      '2024-11-25 19:48:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lgt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    5LGT 
#
_exptl.entry_id    5LGT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LGT 
_cell.length_a            120.07 
_cell.length_b            178.69 
_cell.length_c            235.61 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LGT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 150 n n 
PA O2A FAD sing 151 n n 
PA O5B FAD sing 152 n n 
PA O3P FAD sing 153 n n 
O2A HOA2 FAD sing 154 n n 
O5B C5B FAD sing 155 n n 
C5B C4B FAD sing 156 n n 
C5B H51A FAD sing 157 n n 
C5B H52A FAD sing 158 n n 
C4B O4B FAD sing 159 n n 
C4B C3B FAD sing 160 n n 
C4B H4B FAD sing 161 n n 
O4B C1B FAD sing 162 n n 
C3B O3B FAD sing 163 n n 
C3B C2B FAD sing 164 n n 
C3B H3B FAD sing 165 n n 
O3B HO3A FAD sing 166 n n 
C2B O2B FAD sing 167 n n 
C2B C1B FAD sing 168 n n 
C2B H2B FAD sing 169 n n 
O2B HO2A FAD sing 170 n n 
C1B N9A FAD sing 171 n n 
C1B H1B FAD sing 172 n n 
N9A C8A FAD sing 173 n y 
N9A C4A FAD sing 174 n y 
C8A N7A FAD doub 175 n y 
C8A H8A FAD sing 176 n n 
N7A C5A FAD sing 177 n y 
C5A C6A FAD sing 178 n y 
C5A C4A FAD doub 179 n y 
C6A N6A FAD sing 180 n n 
C6A N1A FAD doub 181 n y 
N6A H61A FAD sing 182 n n 
N6A H62A FAD sing 183 n n 
N1A C2A FAD sing 184 n y 
C2A N3A FAD doub 185 n y 
C2A H2A FAD sing 186 n n 
N3A C4A FAD sing 187 n y 
N1 C2 FAD sing 188 n n 
N1 C10 FAD doub 189 n n 
C2 O2 FAD doub 190 n n 
C2 N3 FAD sing 191 n n 
N3 C4 FAD sing 192 n n 
N3 HN3 FAD sing 193 n n 
C4 O4 FAD doub 194 n n 
C4 C4X FAD sing 195 n n 
C4X N5 FAD doub 196 n n 
C4X C10 FAD sing 197 n n 
N5 C5X FAD sing 198 n n 
C5X C6 FAD doub 199 n y 
C5X C9A FAD sing 200 n y 
C6 C7 FAD sing 201 n y 
C6 H6 FAD sing 202 n n 
C7 C7M FAD sing 203 n n 
C7 C8 FAD doub 204 n y 
C7M HM71 FAD sing 205 n n 
C7M HM72 FAD sing 206 n n 
C7M HM73 FAD sing 207 n n 
C8 C8M FAD sing 208 n n 
C8 C9 FAD sing 209 n y 
C8M HM81 FAD sing 210 n n 
C8M HM82 FAD sing 211 n n 
C8M HM83 FAD sing 212 n n 
C9 C9A FAD doub 213 n y 
C9 H9 FAD sing 214 n n 
C9A N10 FAD sing 215 n n 
N10 C10 FAD sing 216 n n 
N10 C1' FAD sing 217 n n 
C1' C2' FAD sing 218 n n 
C1' "H1'1" FAD sing 219 n n 
C1' "H1'2" FAD sing 220 n n 
C2' O2' FAD sing 221 n n 
C2' C3' FAD sing 222 n n 
C2' H2' FAD sing 223 n n 
O2' HO2' FAD sing 224 n n 
C3' O3' FAD sing 225 n n 
C3' C4' FAD sing 226 n n 
C3' H3' FAD sing 227 n n 
O3' HO3' FAD sing 228 n n 
C4' O4' FAD sing 229 n n 
C4' C5' FAD sing 230 n n 
C4' H4' FAD sing 231 n n 
O4' HO4' FAD sing 232 n n 
C5' O5' FAD sing 233 n n 
C5' "H5'1" FAD sing 234 n n 
C5' "H5'2" FAD sing 235 n n 
O5' P FAD sing 236 n n 
P O1P FAD doub 237 n n 
P O2P FAD sing 238 n n 
P O3P FAD sing 239 n n 
O2P HOP2 FAD sing 240 n n 
#
_atom_sites.entry_id                     5LGT 
_atom_sites.fract_transf_matrix[1][1]    0.008328 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004244 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FAD A 1 901 1837 FAD FAD . 
D 4 6W3 A 1 902 1 6W3 D51 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 -66.77 -21.96 -28.991 1 50.76 ? PA FAD 901 A 1 
HETATM 2 O O1A FAD . . . C 3 -65.875 -21.436 -30.104 1 49.89 ? O1A FAD 901 A 1 
HETATM 3 O O2A FAD . . . C 3 -68.061 -22.748 -29.217 1 50.87 ? O2A FAD 901 A 1 
HETATM 4 O O5B FAD . . . C 3 -67.202 -20.642 -28.171 1 53.02 ? O5B FAD 901 A 1 
HETATM 5 C C5B FAD . . . C 3 -66.283 -19.641 -27.748 1 51.18 ? C5B FAD 901 A 1 
HETATM 6 C C4B FAD . . . C 3 -66.884 -18.279 -28.044 1 50.35 ? C4B FAD 901 A 1 
HETATM 7 O O4B FAD . . . C 3 -65.936 -17.236 -27.786 1 48.99 ? O4B FAD 901 A 1 
HETATM 8 C C3B FAD . . . C 3 -67.316 -18.163 -29.5 1 51.94 ? C3B FAD 901 A 1 
HETATM 9 O O3B FAD . . . C 3 -68.723 -17.896 -29.564 1 54.45 ? O3B FAD 901 A 1 
HETATM 10 C C2B FAD . . . C 3 -66.447 -17.036 -30.047 1 52.56 ? C2B FAD 901 A 1 
HETATM 11 O O2B FAD . . . C 3 -67.034 -16.215 -31.07 1 50.53 ? O2B FAD 901 A 1 
HETATM 12 C C1B FAD . . . C 3 -66.14 -16.25 -28.785 1 50.22 ? C1B FAD 901 A 1 
HETATM 13 N N9A FAD . . . C 3 -64.974 -15.365 -28.966 1 48.96 ? N9A FAD 901 A 1 
HETATM 14 C C8A FAD . . . C 3 -63.856 -15.53 -29.712 1 48.33 ? C8A FAD 901 A 1 
HETATM 15 N N7A FAD . . . C 3 -63.038 -14.451 -29.609 1 46.69 ? N7A FAD 901 A 1 
HETATM 16 C C5A FAD . . . C 3 -63.663 -13.593 -28.792 1 48.83 ? C5A FAD 901 A 1 
HETATM 17 C C6A FAD . . . C 3 -63.375 -12.262 -28.239 1 48.98 ? C6A FAD 901 A 1 
HETATM 18 N N6A FAD . . . C 3 -62.222 -11.649 -28.578 1 50.52 ? N6A FAD 901 A 1 
HETATM 19 N N1A FAD . . . C 3 -64.287 -11.713 -27.402 1 47.98 ? N1A FAD 901 A 1 
HETATM 20 C C2A FAD . . . C 3 -65.444 -12.333 -27.07 1 48.77 ? C2A FAD 901 A 1 
HETATM 21 N N3A FAD . . . C 3 -65.776 -13.548 -27.539 1 48.67 ? N3A FAD 901 A 1 
HETATM 22 C C4A FAD . . . C 3 -64.934 -14.197 -28.377 1 48.84 ? C4A FAD 901 A 1 
HETATM 23 N N1 FAD . . . C 3 -68.448 -31.533 -31.773 1 58.3 ? N1 FAD 901 A 1 
HETATM 24 C C2 FAD . . . C 3 -69.25 -32.639 -31.745 1 64.65 ? C2 FAD 901 A 1 
HETATM 25 O O2 FAD . . . C 3 -69.573 -33.178 -30.651 1 62.93 ? O2 FAD 901 A 1 
HETATM 26 N N3 FAD . . . C 3 -69.73 -33.196 -32.883 1 66.93 ? N3 FAD 901 A 1 
HETATM 27 C C4 FAD . . . C 3 -69.478 -32.702 -34.101 1 60.54 ? C4 FAD 901 A 1 
HETATM 28 O O4 FAD . . . C 3 -69.886 -33.139 -35.197 1 65.75 ? O4 FAD 901 A 1 
HETATM 29 C C4X FAD . . . C 3 -68.65 -31.551 -34.195 1 57.9 ? C4X FAD 901 A 1 
HETATM 30 N N5 FAD . . . C 3 -68.428 -31.112 -35.421 1 59.92 ? N5 FAD 901 A 1 
HETATM 31 C C5X FAD . . . C 3 -67.681 -30.035 -35.584 1 59.37 ? C5X FAD 901 A 1 
HETATM 32 C C6 FAD . . . C 3 -67.51 -29.628 -36.882 1 60.61 ? C6 FAD 901 A 1 
HETATM 33 C C7 FAD . . . C 3 -66.76 -28.522 -37.156 1 59.43 ? C7 FAD 901 A 1 
HETATM 34 C C7M FAD . . . C 3 -66.561 -28.081 -38.572 1 59.91 ? C7M FAD 901 A 1 
HETATM 35 C C8 FAD . . . C 3 -66.165 -27.787 -36.034 1 65 ? C8 FAD 901 A 1 
HETATM 36 C C8M FAD . . . C 3 -65.356 -26.572 -36.377 1 67.49 ? C8M FAD 901 A 1 
HETATM 37 C C9 FAD . . . C 3 -66.339 -28.201 -34.706 1 62.8 ? C9 FAD 901 A 1 
HETATM 38 C C9A FAD . . . C 3 -67.089 -29.327 -34.421 1 58.99 ? C9A FAD 901 A 1 
HETATM 39 N N10 FAD . . . C 3 -67.329 -29.815 -33.104 1 59.18 ? N10 FAD 901 A 1 
HETATM 40 C C10 FAD . . . C 3 -68.126 -30.961 -32.961 1 58.53 ? C10 FAD 901 A 1 
HETATM 41 C C1' FAD . . . C 3 -66.781 -29.228 -31.885 1 58.06 ? C1' FAD 901 A 1 
HETATM 42 C C2' FAD . . . C 3 -67.674 -28.204 -31.255 1 56.42 ? C2' FAD 901 A 1 
HETATM 43 O O2' FAD . . . C 3 -68.056 -27.318 -32.3 1 58.72 ? O2' FAD 901 A 1 
HETATM 44 C C3' FAD . . . C 3 -66.851 -27.497 -30.207 1 57.17 ? C3' FAD 901 A 1 
HETATM 45 O O3' FAD . . . C 3 -66.195 -28.49 -29.408 1 52.07 ? O3' FAD 901 A 1 
HETATM 46 C C4' FAD . . . C 3 -67.666 -26.579 -29.293 1 61.19 ? C4' FAD 901 A 1 
HETATM 47 O O4' FAD . . . C 3 -68.679 -25.762 -29.94 1 64.42 ? O4' FAD 901 A 1 
HETATM 48 C C5' FAD . . . C 3 -66.658 -25.676 -28.598 1 58.26 ? C5' FAD 901 A 1 
HETATM 49 O O5' FAD . . . C 3 -67.332 -24.931 -27.616 1 52.09 ? O5' FAD 901 A 1 
HETATM 50 P P FAD . . . C 3 -66.497 -23.832 -26.858 1 52.62 ? P FAD 901 A 1 
HETATM 51 O O1P FAD . . . C 3 -67.571 -23.171 -26.058 1 57.79 ? O1P FAD 901 A 1 
HETATM 52 O O2P FAD . . . C 3 -65.3 -24.442 -26.173 1 55.5 ? O2P FAD 901 A 1 
HETATM 53 O O3P FAD . . . C 3 -65.878 -22.815 -27.958 1 51.11 ? O3P FAD 901 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           53 
#