data_5LGU
#
_model_server_result.job_id            yNRJind2pXuoIWBuJNkvhw 
_model_server_result.datetime_utc      '2024-11-29 07:07:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5lgu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    5LGU 
#
_exptl.entry_id    5LGU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LGU 
_cell.length_a            121.409 
_cell.length_b            181.155 
_cell.length_c            237.456 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LGU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 147 n n 
PA O2A FAD sing 148 n n 
PA O5B FAD sing 149 n n 
PA O3P FAD sing 150 n n 
O2A HOA2 FAD sing 151 n n 
O5B C5B FAD sing 152 n n 
C5B C4B FAD sing 153 n n 
C5B H51A FAD sing 154 n n 
C5B H52A FAD sing 155 n n 
C4B O4B FAD sing 156 n n 
C4B C3B FAD sing 157 n n 
C4B H4B FAD sing 158 n n 
O4B C1B FAD sing 159 n n 
C3B O3B FAD sing 160 n n 
C3B C2B FAD sing 161 n n 
C3B H3B FAD sing 162 n n 
O3B HO3A FAD sing 163 n n 
C2B O2B FAD sing 164 n n 
C2B C1B FAD sing 165 n n 
C2B H2B FAD sing 166 n n 
O2B HO2A FAD sing 167 n n 
C1B N9A FAD sing 168 n n 
C1B H1B FAD sing 169 n n 
N9A C8A FAD sing 170 n y 
N9A C4A FAD sing 171 n y 
C8A N7A FAD doub 172 n y 
C8A H8A FAD sing 173 n n 
N7A C5A FAD sing 174 n y 
C5A C6A FAD sing 175 n y 
C5A C4A FAD doub 176 n y 
C6A N6A FAD sing 177 n n 
C6A N1A FAD doub 178 n y 
N6A H61A FAD sing 179 n n 
N6A H62A FAD sing 180 n n 
N1A C2A FAD sing 181 n y 
C2A N3A FAD doub 182 n y 
C2A H2A FAD sing 183 n n 
N3A C4A FAD sing 184 n y 
N1 C2 FAD sing 185 n n 
N1 C10 FAD doub 186 n n 
C2 O2 FAD doub 187 n n 
C2 N3 FAD sing 188 n n 
N3 C4 FAD sing 189 n n 
N3 HN3 FAD sing 190 n n 
C4 O4 FAD doub 191 n n 
C4 C4X FAD sing 192 n n 
C4X N5 FAD doub 193 n n 
C4X C10 FAD sing 194 n n 
N5 C5X FAD sing 195 n n 
C5X C6 FAD doub 196 n y 
C5X C9A FAD sing 197 n y 
C6 C7 FAD sing 198 n y 
C6 H6 FAD sing 199 n n 
C7 C7M FAD sing 200 n n 
C7 C8 FAD doub 201 n y 
C7M HM71 FAD sing 202 n n 
C7M HM72 FAD sing 203 n n 
C7M HM73 FAD sing 204 n n 
C8 C8M FAD sing 205 n n 
C8 C9 FAD sing 206 n y 
C8M HM81 FAD sing 207 n n 
C8M HM82 FAD sing 208 n n 
C8M HM83 FAD sing 209 n n 
C9 C9A FAD doub 210 n y 
C9 H9 FAD sing 211 n n 
C9A N10 FAD sing 212 n n 
N10 C10 FAD sing 213 n n 
N10 C1' FAD sing 214 n n 
C1' C2' FAD sing 215 n n 
C1' "H1'1" FAD sing 216 n n 
C1' "H1'2" FAD sing 217 n n 
C2' O2' FAD sing 218 n n 
C2' C3' FAD sing 219 n n 
C2' H2' FAD sing 220 n n 
O2' HO2' FAD sing 221 n n 
C3' O3' FAD sing 222 n n 
C3' C4' FAD sing 223 n n 
C3' H3' FAD sing 224 n n 
O3' HO3' FAD sing 225 n n 
C4' O4' FAD sing 226 n n 
C4' C5' FAD sing 227 n n 
C4' H4' FAD sing 228 n n 
O4' HO4' FAD sing 229 n n 
C5' O5' FAD sing 230 n n 
C5' "H5'1" FAD sing 231 n n 
C5' "H5'2" FAD sing 232 n n 
O5' P FAD sing 233 n n 
P O1P FAD doub 234 n n 
P O2P FAD sing 235 n n 
P O3P FAD sing 236 n n 
O2P HOP2 FAD sing 237 n n 
#
_atom_sites.entry_id                     5LGU 
_atom_sites.fract_transf_matrix[1][1]    0.008237 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00552 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004211 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FAD A 1 901 1837 FAD FAD . 
D 4 6W1 A 1 902 1 6W1 D51 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 -6.638 68.512 89.342 1 63.34 ? PA FAD 901 A 1 
HETATM 2 O O1A FAD . . . C 3 -5.815 69.183 88.259 1 61.56 ? O1A FAD 901 A 1 
HETATM 3 O O2A FAD . . . C 3 -7.898 67.725 88.985 1 61.79 ? O2A FAD 901 A 1 
HETATM 4 O O5B FAD . . . C 3 -7.112 69.712 90.314 1 68.67 ? O5B FAD 901 A 1 
HETATM 5 C C5B FAD . . . C 3 -6.245 70.772 90.705 1 70.82 ? C5B FAD 901 A 1 
HETATM 6 C C4B FAD . . . C 3 -6.853 72.121 90.332 1 70.88 ? C4B FAD 901 A 1 
HETATM 7 O O4B FAD . . . C 3 -5.91 73.177 90.567 1 68.43 ? O4B FAD 901 A 1 
HETATM 8 C C3B FAD . . . C 3 -7.27 72.234 88.868 1 69.98 ? C3B FAD 901 A 1 
HETATM 9 O O3B FAD . . . C 3 -8.667 72.527 88.783 1 76.39 ? O3B FAD 901 A 1 
HETATM 10 C C2B FAD . . . C 3 -6.41 73.366 88.335 1 67.49 ? C2B FAD 901 A 1 
HETATM 11 O O2B FAD . . . C 3 -7.003 74.207 87.362 1 65.49 ? O2B FAD 901 A 1 
HETATM 12 C C1B FAD . . . C 3 -6.129 74.177 89.572 1 66.56 ? C1B FAD 901 A 1 
HETATM 13 N N9A FAD . . . C 3 -4.976 75.086 89.403 1 65.38 ? N9A FAD 901 A 1 
HETATM 14 C C8A FAD . . . C 3 -3.859 74.868 88.689 1 65.02 ? C8A FAD 901 A 1 
HETATM 15 N N7A FAD . . . C 3 -3.022 75.926 88.788 1 67.02 ? N7A FAD 901 A 1 
HETATM 16 C C5A FAD . . . C 3 -3.605 76.836 89.575 1 66.53 ? C5A FAD 901 A 1 
HETATM 17 C C6A FAD . . . C 3 -3.25 78.175 90.084 1 68.08 ? C6A FAD 901 A 1 
HETATM 18 N N6A FAD . . . C 3 -2.073 78.745 89.743 1 73.27 ? N6A FAD 901 A 1 
HETATM 19 N N1A FAD . . . C 3 -4.136 78.798 90.883 1 63.79 ? N1A FAD 901 A 1 
HETATM 20 C C2A FAD . . . C 3 -5.316 78.225 91.208 1 65.5 ? C2A FAD 901 A 1 
HETATM 21 N N3A FAD . . . C 3 -5.701 77.008 90.785 1 63.42 ? N3A FAD 901 A 1 
HETATM 22 C C4A FAD . . . C 3 -4.896 76.28 89.978 1 65.08 ? C4A FAD 901 A 1 
HETATM 23 N N1 FAD . . . C 3 -8.217 58.923 86.556 1 71.08 ? N1 FAD 901 A 1 
HETATM 24 C C2 FAD . . . C 3 -8.998 57.82 86.712 1 77.62 ? C2 FAD 901 A 1 
HETATM 25 O O2 FAD . . . C 3 -9.211 57.393 87.875 1 83.57 ? O2 FAD 901 A 1 
HETATM 26 N N3 FAD . . . C 3 -9.55 57.169 85.66 1 76.09 ? N3 FAD 901 A 1 
HETATM 27 C C4 FAD . . . C 3 -9.36 57.579 84.401 1 72.79 ? C4 FAD 901 A 1 
HETATM 28 O O4 FAD . . . C 3 -9.858 57.031 83.407 1 82.29 ? O4 FAD 901 A 1 
HETATM 29 C C4X FAD . . . C 3 -8.533 58.741 84.146 1 71.41 ? C4X FAD 901 A 1 
HETATM 30 N N5 FAD . . . C 3 -8.355 59.145 82.883 1 71.21 ? N5 FAD 901 A 1 
HETATM 31 C C5X FAD . . . C 3 -7.611 60.238 82.665 1 71.4 ? C5X FAD 901 A 1 
HETATM 32 C C6 FAD . . . C 3 -7.463 60.634 81.356 1 73.82 ? C6 FAD 901 A 1 
HETATM 33 C C7 FAD . . . C 3 -6.711 61.75 81.054 1 71.99 ? C7 FAD 901 A 1 
HETATM 34 C C7M FAD . . . C 3 -6.523 62.189 79.629 1 73.1 ? C7M FAD 901 A 1 
HETATM 35 C C8 FAD . . . C 3 -6.088 62.52 82.145 1 72.22 ? C8 FAD 901 A 1 
HETATM 36 C C8M FAD . . . C 3 -5.284 63.742 81.787 1 72.16 ? C8M FAD 901 A 1 
HETATM 37 C C9 FAD . . . C 3 -6.241 62.13 83.472 1 67.71 ? C9 FAD 901 A 1 
HETATM 38 C C9A FAD . . . C 3 -6.98 61.006 83.78 1 67.86 ? C9A FAD 901 A 1 
HETATM 39 N N10 FAD . . . C 3 -7.162 60.574 85.11 1 71.49 ? N10 FAD 901 A 1 
HETATM 40 C C10 FAD . . . C 3 -7.951 59.424 85.32 1 72.13 ? C10 FAD 901 A 1 
HETATM 41 C C1' FAD . . . C 3 -6.556 61.233 86.274 1 72.27 ? C1' FAD 901 A 1 
HETATM 42 C C2' FAD . . . C 3 -7.462 62.192 87.013 1 73.1 ? C2' FAD 901 A 1 
HETATM 43 O O2' FAD . . . C 3 -7.946 63.146 86.064 1 71.83 ? O2' FAD 901 A 1 
HETATM 44 C C3' FAD . . . C 3 -6.649 62.858 88.115 1 71.07 ? C3' FAD 901 A 1 
HETATM 45 O O3' FAD . . . C 3 -5.986 61.85 88.884 1 65.71 ? O3' FAD 901 A 1 
HETATM 46 C C4' FAD . . . C 3 -7.493 63.733 89.038 1 74.45 ? C4' FAD 901 A 1 
HETATM 47 O O4' FAD . . . C 3 -8.616 64.326 88.36 1 81.26 ? O4' FAD 901 A 1 
HETATM 48 C C5' FAD . . . C 3 -6.613 64.84 89.614 1 72.29 ? C5' FAD 901 A 1 
HETATM 49 O O5' FAD . . . C 3 -7.309 65.593 90.606 1 64.68 ? O5' FAD 901 A 1 
HETATM 50 P P FAD . . . C 3 -6.409 66.605 91.439 1 63.74 ? P FAD 901 A 1 
HETATM 51 O O1P FAD . . . C 3 -7.335 67.449 92.282 1 70.05 ? O1P FAD 901 A 1 
HETATM 52 O O2P FAD . . . C 3 -5.348 65.783 92.116 1 58.96 ? O2P FAD 901 A 1 
HETATM 53 O O3P FAD . . . C 3 -5.728 67.582 90.318 1 63.27 ? O3P FAD 901 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#