data_5LGU # _model_server_result.job_id TqEZJ5PvCcPh692czzkYoA _model_server_result.datetime_utc '2024-11-08 09:32:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lgu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 5LGU # _exptl.entry_id 5LGU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 461.576 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methyl-~{N}-[2-[[4-[[(3~{R})-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5LGU _cell.length_a 121.409 _cell.length_b 181.155 _cell.length_c 237.456 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LGU _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H27 N3 O3 S' _chem_comp.formula_weight 461.576 _chem_comp.id 6W1 _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-~{N}-[2-[[4-[[(3~{R})-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 6W1 doub 1 n y C5 C4 6W1 sing 2 n y C6 C7 6W1 sing 3 n y C4 C3 6W1 doub 4 n y C7 C8 6W1 doub 5 n y C3 C8 6W1 sing 6 n y C3 N1 6W1 sing 7 n n C8 C9 6W1 sing 8 n n O C2 6W1 doub 9 n n N1 C2 6W1 sing 10 n n C2 C1 6W1 sing 11 n n O1 C9 6W1 sing 12 n n O1 C10 6W1 sing 13 n n C N 6W1 sing 14 n n C11 C10 6W1 doub 15 n y C11 C12 6W1 sing 16 n y C10 C20 6W1 sing 17 n y C1 N 6W1 sing 18 n y C1 C21 6W1 doub 19 n y N C25 6W1 sing 20 n y C12 C13 6W1 doub 21 n y C20 C19 6W1 doub 22 n y C21 C22 6W1 sing 23 n y C25 C22 6W1 doub 24 n y C25 C24 6W1 sing 25 n y C13 C19 6W1 sing 26 n y C13 O2 6W1 sing 27 n n C22 S 6W1 sing 28 n y C24 C23 6W1 doub 29 n y C14 O2 6W1 sing 30 n n C14 C15 6W1 sing 31 n n C23 S 6W1 sing 32 n y C16 C15 6W1 sing 33 n n C16 C17 6W1 sing 34 n n C15 C18 6W1 sing 35 n n C17 N2 6W1 sing 36 n n C18 N2 6W1 sing 37 n n N1 H1 6W1 sing 38 n n C4 H2 6W1 sing 39 n n C6 H3 6W1 sing 40 n n C7 H4 6W1 sing 41 n n C9 H5 6W1 sing 42 n n C9 H6 6W1 sing 43 n n C21 H7 6W1 sing 44 n n C24 H8 6W1 sing 45 n n C23 H9 6W1 sing 46 n n C H10 6W1 sing 47 n n C H11 6W1 sing 48 n n C H12 6W1 sing 49 n n C5 H13 6W1 sing 50 n n C20 H14 6W1 sing 51 n n C19 H15 6W1 sing 52 n n C12 H16 6W1 sing 53 n n C11 H17 6W1 sing 54 n n C14 H18 6W1 sing 55 n n C14 H19 6W1 sing 56 n n C15 H20 6W1 sing 57 n n C18 H21 6W1 sing 58 n n C18 H22 6W1 sing 59 n n N2 H23 6W1 sing 60 n n C17 H25 6W1 sing 61 n n C17 H26 6W1 sing 62 n n C16 H27 6W1 sing 63 n n C16 H28 6W1 sing 64 n n # _atom_sites.entry_id 5LGU _atom_sites.fract_transf_matrix[1][1] 0.008237 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 901 1837 FAD FAD . D 4 6W1 A 1 902 1 6W1 D51 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 6W1 . . . D 4 -8.277 53.262 80.601 1 95.23 ? N1 6W1 902 A 1 HETATM 2 C C2 6W1 . . . D 4 -8.195 54.579 80.78 1 86.03 ? C2 6W1 902 A 1 HETATM 3 O O2 6W1 . . . D 4 -3.801 52.609 85.174 1 83.96 ? O2 6W1 902 A 1 HETATM 4 C C4 6W1 . . . D 4 -9.709 53.131 78.623 1 97.06 ? C4 6W1 902 A 1 HETATM 5 C C6 6W1 . . . D 4 -10.354 50.956 77.823 1 90.25 ? C6 6W1 902 A 1 HETATM 6 C C7 6W1 . . . D 4 -9.642 50.374 78.862 1 89.7 ? C7 6W1 902 A 1 HETATM 7 C C8 6W1 . . . D 4 -8.954 51.161 79.777 1 98.31 ? C8 6W1 902 A 1 HETATM 8 C C9 6W1 . . . D 4 -8.169 50.488 80.891 1 106.72 ? C9 6W1 902 A 1 HETATM 9 C C10 6W1 . . . D 4 -6.02 51.265 81.883 1 100.49 ? C10 6W1 902 A 1 HETATM 10 O O 6W1 . . . D 4 -8.612 55.491 80.07 1 87.23 ? O 6W1 902 A 1 HETATM 11 C C1 6W1 . . . D 4 -7.622 54.944 82.081 1 80.5 ? C1 6W1 902 A 1 HETATM 12 C C21 6W1 . . . D 4 -7.935 54.33 83.309 1 75.79 ? C21 6W1 902 A 1 HETATM 13 C C22 6W1 . . . D 4 -7.212 55.015 84.25 1 74.32 ? C22 6W1 902 A 1 HETATM 14 C C25 6W1 . . . D 4 -6.505 55.983 83.662 1 78.24 ? C25 6W1 902 A 1 HETATM 15 C C24 6W1 . . . D 4 -5.711 56.758 84.499 1 80.14 ? C24 6W1 902 A 1 HETATM 16 C C23 6W1 . . . D 4 -5.848 56.303 85.818 1 77.74 ? C23 6W1 902 A 1 HETATM 17 S S 6W1 . . . D 4 -6.972 54.973 85.902 1 68.98 ? S 6W1 902 A 1 HETATM 18 N N 6W1 . . . D 4 -6.76 55.948 82.305 1 82.59 ? N 6W1 902 A 1 HETATM 19 C C 6W1 . . . D 4 -6.094 56.935 81.438 1 89.92 ? C 6W1 902 A 1 HETATM 20 C C3 6W1 . . . D 4 -8.975 52.553 79.665 1 100.48 ? C3 6W1 902 A 1 HETATM 21 C C5 6W1 . . . D 4 -10.389 52.334 77.704 1 92.1 ? C5 6W1 902 A 1 HETATM 22 O O1 6W1 . . . D 4 -6.763 50.826 80.795 1 108.27 ? O1 6W1 902 A 1 HETATM 23 C C20 6W1 . . . D 4 -6.127 50.65 83.133 1 92.58 ? C20 6W1 902 A 1 HETATM 24 C C19 6W1 . . . D 4 -5.381 51.104 84.212 1 86.97 ? C19 6W1 902 A 1 HETATM 25 C C13 6W1 . . . D 4 -4.516 52.182 84.072 1 88.16 ? C13 6W1 902 A 1 HETATM 26 C C12 6W1 . . . D 4 -4.409 52.802 82.824 1 92.57 ? C12 6W1 902 A 1 HETATM 27 C C11 6W1 . . . D 4 -5.155 52.349 81.74 1 97.12 ? C11 6W1 902 A 1 HETATM 28 C C14 6W1 . . . D 4 -3.047 53.82 85.171 1 80.4 ? C14 6W1 902 A 1 HETATM 29 C C15 6W1 . . . D 4 -2.471 54.127 86.544 1 80.63 ? C15 6W1 902 A 1 HETATM 30 C C18 6W1 . . . D 4 -1.618 52.99 87.07 1 83.39 ? C18 6W1 902 A 1 HETATM 31 N N2 6W1 . . . D 4 -0.385 53.564 87.639 1 85.76 ? N2 6W1 902 A 1 HETATM 32 C C17 6W1 . . . D 4 -0.16 54.866 86.997 1 85.83 ? C17 6W1 902 A 1 HETATM 33 C C16 6W1 . . . D 4 -1.517 55.302 86.46 1 85.75 ? C16 6W1 902 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 33 #