data_5LHG # _model_server_result.job_id JvzTqNoRgAWUWRLBvMcdjQ _model_server_result.datetime_utc '2024-10-18 05:16:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":907}' # _entry.id 5LHG # _exptl.entry_id 5LHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 475.602 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methyl-N-[4-[[4-[(1-methyl-4-piperidyl)oxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5LHG _cell.length_a 120.36 _cell.length_b 180.58 _cell.length_c 234.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 688 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 688 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id O3 _struct_conn.ptnr2_label_comp_id GOL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id GOL _struct_conn.ptnr2_auth_seq_id 903 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.298 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H29 N3 O3 S' _chem_comp.formula_weight 475.602 _chem_comp.id 6X3 _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-N-[4-[[4-[(1-methyl-4-piperidyl)oxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 N31 6X3 sing 1 n n C30 N31 6X3 sing 2 n n C30 C29 6X3 sing 3 n n N31 C32 6X3 sing 4 n n C29 C28 6X3 sing 5 n n C32 C33 6X3 sing 6 n n C28 C33 6X3 sing 7 n n C28 O27 6X3 sing 8 n n O27 C24 6X3 sing 9 n n C25 C24 6X3 doub 10 n y C25 C26 6X3 sing 11 n y C24 C23 6X3 sing 12 n y C26 C21 6X3 doub 13 n y C23 C22 6X3 doub 14 n y C19 O20 6X3 sing 15 n n C19 C16 6X3 sing 16 n n C21 C22 6X3 sing 17 n y C21 O20 6X3 sing 18 n n C16 C15 6X3 doub 19 n y C16 C17 6X3 sing 20 n y C15 C14 6X3 sing 21 n y C17 C18 6X3 doub 22 n y C14 C13 6X3 doub 23 n y C18 C13 6X3 sing 24 n y C13 N12 6X3 sing 25 n n O11 C10 6X3 doub 26 n n N12 C10 6X3 sing 27 n n C10 C09 6X3 sing 28 n n C01 N02 6X3 sing 29 n n C09 N02 6X3 sing 30 n y C09 C08 6X3 doub 31 n y N02 C03 6X3 sing 32 n y C08 C07 6X3 sing 33 n y C03 C07 6X3 doub 34 n y C03 C04 6X3 sing 35 n y C07 S06 6X3 sing 36 n y C04 C05 6X3 doub 37 n y C05 S06 6X3 sing 38 n y C15 H1 6X3 sing 39 n n C01 H2 6X3 sing 40 n n C01 H3 6X3 sing 41 n n C01 H4 6X3 sing 42 n n C17 H5 6X3 sing 43 n n C19 H6 6X3 sing 44 n n C19 H7 6X3 sing 45 n n C04 H8 6X3 sing 46 n n C05 H9 6X3 sing 47 n n C08 H10 6X3 sing 48 n n N12 H11 6X3 sing 49 n n C14 H12 6X3 sing 50 n n C18 H13 6X3 sing 51 n n C22 H14 6X3 sing 52 n n C23 H15 6X3 sing 53 n n C25 H16 6X3 sing 54 n n C26 H17 6X3 sing 55 n n C28 H18 6X3 sing 56 n n C29 H19 6X3 sing 57 n n C29 H20 6X3 sing 58 n n C30 H21 6X3 sing 59 n n C30 H22 6X3 sing 60 n n C32 H24 6X3 sing 61 n n C32 H25 6X3 sing 62 n n C33 H26 6X3 sing 63 n n C33 H27 6X3 sing 64 n n C34 H28 6X3 sing 65 n n C34 H29 6X3 sing 66 n n C34 H30 6X3 sing 67 n n # _atom_sites.entry_id 5LHG _atom_sites.fract_transf_matrix[1][1] 0.008308 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004263 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 901 1 FAD FAD . D 4 GOL A 1 902 1 GOL GOL . E 4 GOL A 1 903 3 GOL GOL . F 4 GOL A 1 904 4 GOL GOL . G 4 GOL A 1 905 5 GOL GOL . H 5 6X3 A 1 906 1 6X3 379 . I 5 6X3 A 1 907 2 6X3 379 . J 6 HOH A 1 1001 5 HOH HOH . J 6 HOH A 2 1002 1 HOH HOH . J 6 HOH A 3 1003 2 HOH HOH . J 6 HOH A 4 1004 23 HOH HOH . J 6 HOH A 5 1005 16 HOH HOH . J 6 HOH A 6 1006 10 HOH HOH . J 6 HOH A 7 1007 22 HOH HOH . J 6 HOH A 8 1008 18 HOH HOH . J 6 HOH A 9 1009 11 HOH HOH . J 6 HOH A 10 1010 17 HOH HOH . J 6 HOH A 11 1011 9 HOH HOH . J 6 HOH A 12 1012 3 HOH HOH . J 6 HOH A 13 1013 19 HOH HOH . J 6 HOH A 14 1014 15 HOH HOH . J 6 HOH A 15 1015 12 HOH HOH . J 6 HOH A 16 1016 13 HOH HOH . J 6 HOH A 17 1017 14 HOH HOH . J 6 HOH A 18 1018 25 HOH HOH . J 6 HOH A 19 1019 26 HOH HOH . J 6 HOH A 20 1020 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 6X3 . . . I 5 4.593 -51.273 -34.513 0.88 140.88 ? C13 6X3 907 A 1 HETATM 2 C C15 6X3 . . . I 5 5.773 -50.901 -36.579 0.88 153.5 ? C15 6X3 907 A 1 HETATM 3 C C16 6X3 . . . I 5 6.836 -50.352 -35.883 0.88 167.09 ? C16 6X3 907 A 1 HETATM 4 C C01 6X3 . . . I 5 2.184 -55.138 -32.779 0.88 114.99 ? C01 6X3 907 A 1 HETATM 5 C C17 6X3 . . . I 5 6.782 -50.266 -34.499 0.88 161.5 ? C17 6X3 907 A 1 HETATM 6 C C19 6X3 . . . I 5 8.058 -49.859 -36.672 0.88 173.06 ? C19 6X3 907 A 1 HETATM 7 C C21 6X3 . . . I 5 8.177 -47.592 -36.017 0.88 180.48 ? C21 6X3 907 A 1 HETATM 8 N N02 6X3 . . . I 5 1.49 -54.052 -32.118 0.88 134.99 ? N02 6X3 907 A 1 HETATM 9 C C03 6X3 . . . I 5 0.271 -54.155 -31.549 0.88 155.78 ? C03 6X3 907 A 1 HETATM 10 C C04 6X3 . . . I 5 -0.675 -55.195 -31.391 0.88 157.85 ? C04 6X3 907 A 1 HETATM 11 C C05 6X3 . . . I 5 -1.829 -54.85 -30.723 0.88 168.52 ? C05 6X3 907 A 1 HETATM 12 S S06 6X3 . . . I 5 -1.636 -53.171 -30.324 0.88 187.68 ? S06 6X3 907 A 1 HETATM 13 C C07 6X3 . . . I 5 -0.062 -52.927 -31.024 0.88 169.4 ? C07 6X3 907 A 1 HETATM 14 C C08 6X3 . . . I 5 1.014 -52.07 -31.301 0.88 153.7 ? C08 6X3 907 A 1 HETATM 15 C C09 6X3 . . . I 5 1.963 -52.831 -31.989 0.88 146.31 ? C09 6X3 907 A 1 HETATM 16 C C10 6X3 . . . I 5 3.321 -52.346 -32.516 0.88 151.54 ? C10 6X3 907 A 1 HETATM 17 O O11 6X3 . . . I 5 4.287 -52.448 -31.836 0.88 155.23 ? O11 6X3 907 A 1 HETATM 18 N N12 6X3 . . . I 5 3.385 -51.771 -33.857 0.88 143.1 ? N12 6X3 907 A 1 HETATM 19 C C14 6X3 . . . I 5 4.659 -51.359 -35.895 0.88 141.37 ? C14 6X3 907 A 1 HETATM 20 C C18 6X3 . . . I 5 5.66 -50.721 -33.813 0.88 148.78 ? C18 6X3 907 A 1 HETATM 21 O O20 6X3 . . . I 5 8.756 -48.874 -35.963 0.88 178.25 ? O20 6X3 907 A 1 HETATM 22 C C22 6X3 . . . I 5 7.818 -46.975 -34.835 0.88 177.82 ? C22 6X3 907 A 1 HETATM 23 C C23 6X3 . . . I 5 7.259 -45.712 -34.844 0.88 173.61 ? C23 6X3 907 A 1 HETATM 24 C C24 6X3 . . . I 5 7.011 -45.052 -36.043 0.88 175.72 ? C24 6X3 907 A 1 HETATM 25 C C25 6X3 . . . I 5 7.379 -45.672 -37.233 0.88 173.64 ? C25 6X3 907 A 1 HETATM 26 C C26 6X3 . . . I 5 7.955 -46.941 -37.224 0.88 174.36 ? C26 6X3 907 A 1 HETATM 27 O O27 6X3 . . . I 5 6.441 -43.753 -36.091 0.88 175.64 ? O27 6X3 907 A 1 HETATM 28 C C28 6X3 . . . I 5 5.252 -43.509 -35.344 0.88 169.83 ? C28 6X3 907 A 1 HETATM 29 C C29 6X3 . . . I 5 4.302 -44.602 -35.435 0.88 163.78 ? C29 6X3 907 A 1 HETATM 30 C C30 6X3 . . . I 5 3.149 -44.484 -34.436 0.88 159.28 ? C30 6X3 907 A 1 HETATM 31 N N31 6X3 . . . I 5 3.628 -44.246 -33.104 0.88 156.71 ? N31 6X3 907 A 1 HETATM 32 C C32 6X3 . . . I 5 4.402 -43.04 -33.038 0.88 156.91 ? C32 6X3 907 A 1 HETATM 33 C C33 6X3 . . . I 5 5.59 -43.078 -34 0.88 160.93 ? C33 6X3 907 A 1 HETATM 34 C C34 6X3 . . . I 5 2.703 -44.193 -32.326 0.88 144.37 ? C34 6X3 907 A 1 # _model_server_stats.io_time_ms 134 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 34 #