data_5LHI # _model_server_result.job_id -bd2Su7BDhKzZwO_Z4jAbw _model_server_result.datetime_utc '2024-11-26 18:53:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lhi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 5LHI # _exptl.entry_id 5LHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 519.655 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[3-(ethoxymethyl)-2-[[4-[[(3~{R})-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]-4-methyl-thieno[3,2-b]pyrrole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5LHI _cell.length_a 120.03 _cell.length_b 180.37 _cell.length_c 235.75 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H33 N3 O4 S' _chem_comp.formula_weight 519.655 _chem_comp.id 6X5 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[3-(ethoxymethyl)-2-[[4-[[(3~{R})-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]-4-methyl-thieno[3,2-b]pyrrole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C06 C07 6X5 doub 1 n y C06 C05 6X5 sing 2 n y C07 C08 6X5 sing 3 n y C04 C05 6X5 sing 4 n n C04 O03 6X5 sing 5 n n C05 C10 6X5 doub 6 n y C08 C09 6X5 doub 7 n y C10 C09 6X5 sing 8 n y C10 C11 6X5 sing 9 n n O03 C02 6X5 sing 10 n n C09 N26 6X5 sing 11 n n O28 C27 6X5 doub 12 n n C02 C01 6X5 sing 13 n n C11 O12 6X5 sing 14 n n N26 C27 6X5 sing 15 n n C27 C29 6X5 sing 16 n n C34 N33 6X5 sing 17 n n C14 C15 6X5 doub 18 n y C14 C13 6X5 sing 19 n y O12 C13 6X5 sing 20 n n C29 N33 6X5 sing 21 n y C29 C30 6X5 doub 22 n y N33 C32 6X5 sing 23 n y C15 C16 6X5 sing 24 n y C13 C18 6X5 doub 25 n y C32 C35 6X5 sing 26 n y C32 C31 6X5 doub 27 n y C30 C31 6X5 sing 28 n y C16 O19 6X5 sing 29 n n C16 C17 6X5 doub 30 n y C18 C17 6X5 sing 31 n y C35 C36 6X5 doub 32 n y C31 S37 6X5 sing 33 n y O19 C20 6X5 sing 34 n n C36 S37 6X5 sing 35 n y C20 C21 6X5 sing 36 n n C22 C23 6X5 sing 37 n n C22 C21 6X5 sing 38 n n C23 N24 6X5 sing 39 n n C21 C25 6X5 sing 40 n n C25 N24 6X5 sing 41 n n C01 H1 6X5 sing 42 n n C01 H2 6X5 sing 43 n n C01 H3 6X5 sing 44 n n C02 H4 6X5 sing 45 n n C02 H5 6X5 sing 46 n n C04 H6 6X5 sing 47 n n C04 H7 6X5 sing 48 n n C06 H8 6X5 sing 49 n n C07 H9 6X5 sing 50 n n C08 H10 6X5 sing 51 n n C11 H11 6X5 sing 52 n n C11 H12 6X5 sing 53 n n C14 H13 6X5 sing 54 n n C15 H14 6X5 sing 55 n n C17 H15 6X5 sing 56 n n C18 H16 6X5 sing 57 n n C20 H17 6X5 sing 58 n n C20 H18 6X5 sing 59 n n C21 H19 6X5 sing 60 n n C22 H20 6X5 sing 61 n n C22 H21 6X5 sing 62 n n C23 H22 6X5 sing 63 n n C23 H23 6X5 sing 64 n n N24 H24 6X5 sing 65 n n C25 H26 6X5 sing 66 n n C25 H27 6X5 sing 67 n n N26 H28 6X5 sing 68 n n C30 H29 6X5 sing 69 n n C34 H30 6X5 sing 70 n n C34 H31 6X5 sing 71 n n C34 H32 6X5 sing 72 n n C35 H33 6X5 sing 73 n n C36 H34 6X5 sing 74 n n # _atom_sites.entry_id 5LHI _atom_sites.fract_transf_matrix[1][1] 0.008331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005544 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004242 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 901 1837 FAD FAD . D 4 6X5 A 1 902 1 6X5 832 . E 5 GOL A 1 903 2 GOL GOL . F 5 GOL A 1 904 3 GOL GOL . G 6 HOH A 1 1001 15 HOH HOH . G 6 HOH A 2 1002 5 HOH HOH . G 6 HOH A 3 1003 12 HOH HOH . G 6 HOH A 4 1004 18 HOH HOH . G 6 HOH A 5 1005 7 HOH HOH . G 6 HOH A 6 1006 17 HOH HOH . G 6 HOH A 7 1007 14 HOH HOH . G 6 HOH A 8 1008 3 HOH HOH . G 6 HOH A 9 1009 19 HOH HOH . G 6 HOH A 10 1010 4 HOH HOH . G 6 HOH A 11 1011 6 HOH HOH . G 6 HOH A 12 1012 13 HOH HOH . G 6 HOH A 13 1013 20 HOH HOH . G 6 HOH A 14 1014 16 HOH HOH . G 6 HOH A 15 1015 2 HOH HOH . G 6 HOH A 16 1016 8 HOH HOH . G 6 HOH A 17 1017 11 HOH HOH . H 6 HOH B 1 501 9 HOH HOH . H 6 HOH B 2 502 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 6X5 . . . D 4 8.331 -45.558 -36.871 1 132.58 ? C01 6X5 902 A 1 HETATM 2 C C02 6X5 . . . D 4 8.153 -46.007 -38.332 1 136.82 ? C02 6X5 902 A 1 HETATM 3 O O03 6X5 . . . D 4 9.159 -46.917 -38.67 1 132.82 ? O03 6X5 902 A 1 HETATM 4 C C04 6X5 . . . D 4 8.862 -47.68 -39.859 1 126.32 ? C04 6X5 902 A 1 HETATM 5 C C05 6X5 . . . D 4 9.432 -49.102 -39.701 1 115.77 ? C05 6X5 902 A 1 HETATM 6 C C06 6X5 . . . D 4 10.539 -49.501 -40.437 1 102.41 ? C06 6X5 902 A 1 HETATM 7 C C07 6X5 . . . D 4 11.067 -50.834 -40.283 1 91.83 ? C07 6X5 902 A 1 HETATM 8 C C08 6X5 . . . D 4 10.473 -51.721 -39.395 1 89.94 ? C08 6X5 902 A 1 HETATM 9 C C09 6X5 . . . D 4 9.328 -51.314 -38.649 1 93.54 ? C09 6X5 902 A 1 HETATM 10 C C10 6X5 . . . D 4 8.82 -50.007 -38.785 1 113.16 ? C10 6X5 902 A 1 HETATM 11 C C11 6X5 . . . D 4 7.564 -49.549 -37.964 1 118.84 ? C11 6X5 902 A 1 HETATM 12 O O12 6X5 . . . D 4 7.75 -49.814 -36.55 1 119.33 ? O12 6X5 902 A 1 HETATM 13 C C13 6X5 . . . D 4 6.651 -50.451 -35.915 1 109.4 ? C13 6X5 902 A 1 HETATM 14 C C14 6X5 . . . D 4 5.888 -51.366 -36.599 1 105.09 ? C14 6X5 902 A 1 HETATM 15 C C15 6X5 . . . D 4 4.799 -52.007 -35.959 1 101.52 ? C15 6X5 902 A 1 HETATM 16 C C16 6X5 . . . D 4 4.495 -51.707 -34.62 1 96.12 ? C16 6X5 902 A 1 HETATM 17 C C17 6X5 . . . D 4 5.256 -50.797 -33.935 1 92.27 ? C17 6X5 902 A 1 HETATM 18 C C18 6X5 . . . D 4 6.347 -50.157 -34.578 1 99.12 ? C18 6X5 902 A 1 HETATM 19 O O19 6X5 . . . D 4 3.423 -52.342 -33.993 1 101.13 ? O19 6X5 902 A 1 HETATM 20 C C20 6X5 . . . D 4 2.974 -51.693 -32.829 1 100.47 ? C20 6X5 902 A 1 HETATM 21 C C21 6X5 . . . D 4 2.699 -52.781 -31.72 1 80.34 ? C21 6X5 902 A 1 HETATM 22 C C22 6X5 . . . D 4 2.958 -54.213 -32.301 1 55.7 ? C22 6X5 902 A 1 HETATM 23 C C23 6X5 . . . D 4 1.56 -54.96 -32.199 1 73.35 ? C23 6X5 902 A 1 HETATM 24 N N24 6X5 . . . D 4 0.872 -54.293 -31.256 1 74.21 ? N24 6X5 902 A 1 HETATM 25 C C25 6X5 . . . D 4 1.385 -52.74 -31.356 1 81.42 ? C25 6X5 902 A 1 HETATM 26 N N26 6X5 . . . D 4 8.669 -52.225 -37.658 1 75.17 ? N26 6X5 902 A 1 HETATM 27 C C27 6X5 . . . D 4 8.625 -53.691 -37.647 1 66.39 ? C27 6X5 902 A 1 HETATM 28 O O28 6X5 . . . D 4 9.14 -54.38 -38.497 1 73.06 ? O28 6X5 902 A 1 HETATM 29 C C29 6X5 . . . D 4 7.881 -54.293 -36.444 1 66.21 ? C29 6X5 902 A 1 HETATM 30 C C30 6X5 . . . D 4 8.135 -53.881 -35.113 1 71.93 ? C30 6X5 902 A 1 HETATM 31 C C31 6X5 . . . D 4 7.293 -54.609 -34.283 1 71.72 ? C31 6X5 902 A 1 HETATM 32 C C32 6X5 . . . D 4 6.56 -55.426 -35.133 1 77.64 ? C32 6X5 902 A 1 HETATM 33 N N33 6X5 . . . D 4 6.944 -55.2 -36.415 1 69.14 ? N33 6X5 902 A 1 HETATM 34 C C34 6X5 . . . D 4 6.386 -55.885 -37.583 1 63.54 ? C34 6X5 902 A 1 HETATM 35 C C35 6X5 . . . D 4 5.626 -56.263 -34.489 1 80.85 ? C35 6X5 902 A 1 HETATM 36 C C36 6X5 . . . D 4 5.568 -56.158 -33.105 1 76.98 ? C36 6X5 902 A 1 HETATM 37 S S37 6X5 . . . D 4 6.746 -54.949 -32.659 1 61.32 ? S37 6X5 902 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 527 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 37 #