data_5LHU # _model_server_result.job_id iJzsIltyVo6kfYRE9qqe0A _model_server_result.datetime_utc '2024-12-03 04:36:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lhu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5LHU # _exptl.entry_id 5LHU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.162 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LHU _cell.length_a 117.012 _cell.length_b 117.012 _cell.length_c 127.332 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LHU _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_557 y,x,-z+2 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 254.664 5 'crystal symmetry operation' 5_557 x-y,-y,-z+2 1 0 0 0 -1 0 0 0 -1 0 0 254.664 6 'crystal symmetry operation' 6_557 -x,-x+y,-z+2 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 254.664 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 83 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 73 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 185 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 175 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.064 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H10 N3 O2 1' _chem_comp.formula_weight 156.162 _chem_comp.id HIS _chem_comp.mon_nstd_flag y _chem_comp.name HISTIDINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HIS sing 142 n n N H HIS sing 143 n n N H2 HIS sing 144 n n CA C HIS sing 145 n n CA CB HIS sing 146 n n CA HA HIS sing 147 n n C O HIS doub 148 n n C OXT HIS sing 149 n n CB CG HIS sing 150 n n CB HB2 HIS sing 151 n n CB HB3 HIS sing 152 n n CG ND1 HIS sing 153 n y CG CD2 HIS doub 154 n y ND1 CE1 HIS doub 155 n y ND1 HD1 HIS sing 156 n n CD2 NE2 HIS sing 157 n y CD2 HD2 HIS sing 158 n n CE1 NE2 HIS sing 159 n y CE1 HE1 HIS sing 160 n n NE2 HE2 HIS sing 161 n n OXT HXT HIS sing 162 n n # _atom_sites.entry_id 5LHU _atom_sites.fract_transf_matrix[1][1] 0.008546 _atom_sites.fract_transf_matrix[1][2] 0.004934 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HIS A 1 301 285 HIS HIS . C 3 SO4 A 1 302 286 SO4 SO4 . D 3 SO4 A 1 303 287 SO4 SO4 . E 3 SO4 A 1 304 288 SO4 SO4 . F 3 SO4 A 1 305 289 SO4 SO4 . G 3 SO4 A 1 306 290 SO4 SO4 . H 3 SO4 A 1 307 291 SO4 SO4 . I 4 GOL A 1 308 292 GOL GOL . J 5 HOH A 1 401 76 HOH HOH . J 5 HOH A 2 402 69 HOH HOH . J 5 HOH A 3 403 12 HOH HOH . J 5 HOH A 4 404 74 HOH HOH . J 5 HOH A 5 405 75 HOH HOH . J 5 HOH A 6 406 7 HOH HOH . J 5 HOH A 7 407 14 HOH HOH . J 5 HOH A 8 408 2 HOH HOH . J 5 HOH A 9 409 85 HOH HOH . J 5 HOH A 10 410 52 HOH HOH . J 5 HOH A 11 411 51 HOH HOH . J 5 HOH A 12 412 10 HOH HOH . J 5 HOH A 13 413 21 HOH HOH . J 5 HOH A 14 414 23 HOH HOH . J 5 HOH A 15 415 73 HOH HOH . J 5 HOH A 16 416 4 HOH HOH . J 5 HOH A 17 417 79 HOH HOH . J 5 HOH A 18 418 64 HOH HOH . J 5 HOH A 19 419 38 HOH HOH . J 5 HOH A 20 420 53 HOH HOH . J 5 HOH A 21 421 62 HOH HOH . J 5 HOH A 22 422 47 HOH HOH . J 5 HOH A 23 423 70 HOH HOH . J 5 HOH A 24 424 44 HOH HOH . J 5 HOH A 25 425 78 HOH HOH . J 5 HOH A 26 426 24 HOH HOH . J 5 HOH A 27 427 57 HOH HOH . J 5 HOH A 28 428 1 HOH HOH . J 5 HOH A 29 429 3 HOH HOH . J 5 HOH A 30 430 27 HOH HOH . J 5 HOH A 31 431 46 HOH HOH . J 5 HOH A 32 432 25 HOH HOH . J 5 HOH A 33 433 65 HOH HOH . J 5 HOH A 34 434 43 HOH HOH . J 5 HOH A 35 435 63 HOH HOH . J 5 HOH A 36 436 37 HOH HOH . J 5 HOH A 37 437 48 HOH HOH . J 5 HOH A 38 438 71 HOH HOH . J 5 HOH A 39 439 26 HOH HOH . J 5 HOH A 40 440 33 HOH HOH . J 5 HOH A 41 441 50 HOH HOH . J 5 HOH A 42 442 28 HOH HOH . J 5 HOH A 43 443 13 HOH HOH . J 5 HOH A 44 444 45 HOH HOH . J 5 HOH A 45 445 19 HOH HOH . J 5 HOH A 46 446 8 HOH HOH . J 5 HOH A 47 447 82 HOH HOH . J 5 HOH A 48 448 56 HOH HOH . J 5 HOH A 49 449 6 HOH HOH . J 5 HOH A 50 450 42 HOH HOH . J 5 HOH A 51 451 30 HOH HOH . J 5 HOH A 52 452 81 HOH HOH . J 5 HOH A 53 453 36 HOH HOH . J 5 HOH A 54 454 11 HOH HOH . J 5 HOH A 55 455 18 HOH HOH . J 5 HOH A 56 456 39 HOH HOH . J 5 HOH A 57 457 22 HOH HOH . J 5 HOH A 58 458 55 HOH HOH . J 5 HOH A 59 459 16 HOH HOH . J 5 HOH A 60 460 17 HOH HOH . J 5 HOH A 61 461 15 HOH HOH . J 5 HOH A 62 462 5 HOH HOH . J 5 HOH A 63 463 32 HOH HOH . J 5 HOH A 64 464 35 HOH HOH . J 5 HOH A 65 465 41 HOH HOH . J 5 HOH A 66 466 9 HOH HOH . J 5 HOH A 67 467 66 HOH HOH . J 5 HOH A 68 468 68 HOH HOH . J 5 HOH A 69 469 29 HOH HOH . J 5 HOH A 70 470 86 HOH HOH . J 5 HOH A 71 471 31 HOH HOH . J 5 HOH A 72 472 49 HOH HOH . J 5 HOH A 73 473 20 HOH HOH . J 5 HOH A 74 474 58 HOH HOH . J 5 HOH A 75 475 54 HOH HOH . J 5 HOH A 76 476 77 HOH HOH . J 5 HOH A 77 477 60 HOH HOH . J 5 HOH A 78 478 59 HOH HOH . J 5 HOH A 79 479 40 HOH HOH . J 5 HOH A 80 480 61 HOH HOH . J 5 HOH A 81 481 87 HOH HOH . J 5 HOH A 82 482 80 HOH HOH . J 5 HOH A 83 483 34 HOH HOH . J 5 HOH A 84 484 72 HOH HOH . J 5 HOH A 85 485 84 HOH HOH . J 5 HOH A 86 486 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HIS . . . B 2 1.734 -9.128 174.338 1 31.73 ? N HIS 301 A 1 HETATM 2 C CA HIS . . . B 2 1.021 -9.497 173.114 1 35.34 ? CA HIS 301 A 1 HETATM 3 C C HIS . . . B 2 1.482 -10.848 172.599 1 38.1 ? C HIS 301 A 1 HETATM 4 O O HIS . . . B 2 0.9 -11.389 171.64 1 29.23 ? O HIS 301 A 1 HETATM 5 C CB HIS . . . B 2 1.216 -8.426 172.016 1 31.39 ? CB HIS 301 A 1 HETATM 6 C CG HIS . . . B 2 2.641 -8.244 171.578 1 30.92 ? CG HIS 301 A 1 HETATM 7 N ND1 HIS . . . B 2 3.364 -7.104 171.885 1 41.36 ? ND1 HIS 301 A 1 HETATM 8 C CD2 HIS . . . B 2 3.471 -9.04 170.844 1 15.02 ? CD2 HIS 301 A 1 HETATM 9 C CE1 HIS . . . B 2 4.576 -7.205 171.354 1 32.75 ? CE1 HIS 301 A 1 HETATM 10 N NE2 HIS . . . B 2 4.665 -8.369 170.729 1 35.79 ? NE2 HIS 301 A 1 HETATM 11 O OXT HIS . . . B 2 2.443 -11.412 173.141 1 32.69 ? OXT HIS 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 52 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 472 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #