data_5LI3
#
_model_server_result.job_id            Q9dt3e8VAKYicprXA5FAOw 
_model_server_result.datetime_utc      '2024-11-29 11:45:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5li3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5LI3 
#
_exptl.entry_id    5LI3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              39.098 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'POTASSIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5LI3 
_cell.length_a            82.19 
_cell.length_b            82.19 
_cell.length_c            217.03 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5LI3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 179 A ASP 179 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.128 ? 
metalc ? metalc2 A OD1 ASP 179 A ASP 179 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc3 A OD1 ASP 181 A ASP 181 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc4 A OD2 ASP 181 A ASP 181 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc5 A O ASP 181 A ASP 181 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc6 A ND1 HIS 183 A HIS 183 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc7 A O HIS 183 A HIS 183 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc8 A O TYR 192 A TYR 192 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc9 A O ARG 195 A ARG 195 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.049 ? 
metalc ? metalc10 A O VAL 198 A VAL 198 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc11 A OG SER 202 A SER 202 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? 
metalc ? metalc12 A O LEU 203 A LEU 203 1_555 D K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc13 A O PHE 227 A PHE 227 1_555 E K K . A K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? 
metalc ? metalc14 A OD2 ASP 269 A ASP 269 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc15 C ZN ZN . A ZN 401 1_555 F O 9RB . A 9RB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc16 C ZN ZN . A ZN 401 1_555 F O1 9RB . A 9RB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc17 E K K . A K 403 1_555 K O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? 
metalc ? metalc18 E K K . A K 403 1_555 K O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? 
metalc ? metalc19 B O ASP 179 B ASP 179 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? 
metalc ? metalc20 B OD1 ASP 179 B ASP 179 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? 
metalc ? metalc21 B OD1 ASP 181 B ASP 181 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc22 B OD2 ASP 181 B ASP 181 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc23 B O ASP 181 B ASP 181 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc24 B ND1 HIS 183 B HIS 183 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc25 B O HIS 183 B HIS 183 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? 
metalc ? metalc26 B O TYR 192 B TYR 192 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc27 B O ARG 195 B ARG 195 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? 
metalc ? metalc28 B O VAL 198 B VAL 198 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc29 B OG SER 202 B SER 202 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? 
metalc ? metalc30 B O LEU 203 B LEU 203 1_555 H K K . B K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc31 B O PHE 227 B PHE 227 1_555 I K K . B K 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc32 B OD2 ASP 269 B ASP 269 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc33 G ZN ZN . B ZN 401 1_555 J O1 9RB . B 9RB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc34 G ZN ZN . B ZN 401 1_555 J O 9RB . B 9RB 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
metalc ? metalc35 I K K . B K 403 1_555 L O HOH . B HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc36 I K K . B K 403 1_555 L O HOH . B HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? 
#
_chem_comp.formula           'K 1' 
_chem_comp.formula_weight    39.098 
_chem_comp.id                K 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'POTASSIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5LI3 
_atom_sites.fract_transf_matrix[1][1]    0.012167 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012167 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004608 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 377 ZN ZN . 
D 3 K A 1 402 378 K K . 
E 3 K A 1 403 379 K K . 
F 4 9RB A 1 404 380 9RB 395 . 
G 2 ZN B 1 401 371 ZN ZN . 
H 3 K B 1 402 372 K K . 
I 3 K B 1 403 373 K K . 
J 4 9RB B 1 404 374 9RB 395 . 
K 5 HOH A 1 501 397 HOH HOH . 
K 5 HOH A 2 502 419 HOH HOH . 
K 5 HOH A 3 503 451 HOH HOH . 
K 5 HOH A 4 504 398 HOH HOH . 
K 5 HOH A 5 505 467 HOH HOH . 
K 5 HOH A 6 506 393 HOH HOH . 
K 5 HOH A 7 507 430 HOH HOH . 
K 5 HOH A 8 508 423 HOH HOH . 
K 5 HOH A 9 509 422 HOH HOH . 
K 5 HOH A 10 510 462 HOH HOH . 
K 5 HOH A 11 511 415 HOH HOH . 
K 5 HOH A 12 512 443 HOH HOH . 
K 5 HOH A 13 513 421 HOH HOH . 
K 5 HOH A 14 514 404 HOH HOH . 
K 5 HOH A 15 515 385 HOH HOH . 
K 5 HOH A 16 516 434 HOH HOH . 
K 5 HOH A 17 517 386 HOH HOH . 
K 5 HOH A 18 518 400 HOH HOH . 
K 5 HOH A 19 519 418 HOH HOH . 
K 5 HOH A 20 520 463 HOH HOH . 
K 5 HOH A 21 521 456 HOH HOH . 
K 5 HOH A 22 522 416 HOH HOH . 
K 5 HOH A 23 523 405 HOH HOH . 
K 5 HOH A 24 524 391 HOH HOH . 
K 5 HOH A 25 525 412 HOH HOH . 
K 5 HOH A 26 526 424 HOH HOH . 
K 5 HOH A 27 527 410 HOH HOH . 
K 5 HOH A 28 528 437 HOH HOH . 
K 5 HOH A 29 529 445 HOH HOH . 
K 5 HOH A 30 530 442 HOH HOH . 
K 5 HOH A 31 531 394 HOH HOH . 
K 5 HOH A 32 532 464 HOH HOH . 
K 5 HOH A 33 533 431 HOH HOH . 
K 5 HOH A 34 534 403 HOH HOH . 
K 5 HOH A 35 535 395 HOH HOH . 
K 5 HOH A 36 536 465 HOH HOH . 
K 5 HOH A 37 537 417 HOH HOH . 
K 5 HOH A 38 538 420 HOH HOH . 
K 5 HOH A 39 539 387 HOH HOH . 
K 5 HOH A 40 540 427 HOH HOH . 
K 5 HOH A 41 541 396 HOH HOH . 
K 5 HOH A 42 542 469 HOH HOH . 
K 5 HOH A 43 543 458 HOH HOH . 
K 5 HOH A 44 544 401 HOH HOH . 
K 5 HOH A 45 545 436 HOH HOH . 
K 5 HOH A 46 546 428 HOH HOH . 
K 5 HOH A 47 547 441 HOH HOH . 
K 5 HOH A 48 548 392 HOH HOH . 
K 5 HOH A 49 549 425 HOH HOH . 
K 5 HOH A 50 550 461 HOH HOH . 
K 5 HOH A 51 551 384 HOH HOH . 
K 5 HOH A 52 552 447 HOH HOH . 
K 5 HOH A 53 553 433 HOH HOH . 
K 5 HOH A 54 554 429 HOH HOH . 
K 5 HOH A 55 555 440 HOH HOH . 
K 5 HOH A 56 556 408 HOH HOH . 
K 5 HOH A 57 557 468 HOH HOH . 
K 5 HOH A 58 558 406 HOH HOH . 
K 5 HOH A 59 559 438 HOH HOH . 
K 5 HOH A 60 560 426 HOH HOH . 
K 5 HOH A 61 561 383 HOH HOH . 
K 5 HOH A 62 562 432 HOH HOH . 
K 5 HOH A 63 563 413 HOH HOH . 
K 5 HOH A 64 564 455 HOH HOH . 
K 5 HOH A 65 565 452 HOH HOH . 
K 5 HOH A 66 566 454 HOH HOH . 
K 5 HOH A 67 567 457 HOH HOH . 
K 5 HOH A 68 568 453 HOH HOH . 
K 5 HOH A 69 569 407 HOH HOH . 
K 5 HOH A 70 570 460 HOH HOH . 
K 5 HOH A 71 571 402 HOH HOH . 
K 5 HOH A 72 572 435 HOH HOH . 
K 5 HOH A 73 573 382 HOH HOH . 
K 5 HOH A 74 574 466 HOH HOH . 
K 5 HOH A 75 575 414 HOH HOH . 
K 5 HOH A 76 576 409 HOH HOH . 
K 5 HOH A 77 577 399 HOH HOH . 
K 5 HOH A 78 578 381 HOH HOH . 
K 5 HOH A 79 579 448 HOH HOH . 
K 5 HOH A 80 580 387 HOH HOH . 
K 5 HOH A 81 581 446 HOH HOH . 
K 5 HOH A 82 582 444 HOH HOH . 
K 5 HOH A 83 583 425 HOH HOH . 
K 5 HOH A 84 584 450 HOH HOH . 
K 5 HOH A 85 585 388 HOH HOH . 
K 5 HOH A 86 586 411 HOH HOH . 
K 5 HOH A 87 587 459 HOH HOH . 
K 5 HOH A 88 588 449 HOH HOH . 
K 5 HOH A 89 589 439 HOH HOH . 
L 5 HOH B 1 501 394 HOH HOH . 
L 5 HOH B 2 502 427 HOH HOH . 
L 5 HOH B 3 503 379 HOH HOH . 
L 5 HOH B 4 504 415 HOH HOH . 
L 5 HOH B 5 505 420 HOH HOH . 
L 5 HOH B 6 506 428 HOH HOH . 
L 5 HOH B 7 507 385 HOH HOH . 
L 5 HOH B 8 508 408 HOH HOH . 
L 5 HOH B 9 509 377 HOH HOH . 
L 5 HOH B 10 510 382 HOH HOH . 
L 5 HOH B 11 511 384 HOH HOH . 
L 5 HOH B 12 512 383 HOH HOH . 
L 5 HOH B 13 513 437 HOH HOH . 
L 5 HOH B 14 514 381 HOH HOH . 
L 5 HOH B 15 515 397 HOH HOH . 
L 5 HOH B 16 516 416 HOH HOH . 
L 5 HOH B 17 517 413 HOH HOH . 
L 5 HOH B 18 518 426 HOH HOH . 
L 5 HOH B 19 519 1 HOH HOH . 
L 5 HOH B 20 520 414 HOH HOH . 
L 5 HOH B 21 521 400 HOH HOH . 
L 5 HOH B 22 522 386 HOH HOH . 
L 5 HOH B 23 523 376 HOH HOH . 
L 5 HOH B 24 524 432 HOH HOH . 
L 5 HOH B 25 525 391 HOH HOH . 
L 5 HOH B 26 526 430 HOH HOH . 
L 5 HOH B 27 527 390 HOH HOH . 
L 5 HOH B 28 528 405 HOH HOH . 
L 5 HOH B 29 529 424 HOH HOH . 
L 5 HOH B 30 530 402 HOH HOH . 
L 5 HOH B 31 531 375 HOH HOH . 
L 5 HOH B 32 532 418 HOH HOH . 
L 5 HOH B 33 533 399 HOH HOH . 
L 5 HOH B 34 534 412 HOH HOH . 
L 5 HOH B 35 535 378 HOH HOH . 
L 5 HOH B 36 536 419 HOH HOH . 
L 5 HOH B 37 537 403 HOH HOH . 
L 5 HOH B 38 538 407 HOH HOH . 
L 5 HOH B 39 539 422 HOH HOH . 
L 5 HOH B 40 540 423 HOH HOH . 
L 5 HOH B 41 541 398 HOH HOH . 
L 5 HOH B 42 542 401 HOH HOH . 
L 5 HOH B 43 543 393 HOH HOH . 
L 5 HOH B 44 544 434 HOH HOH . 
L 5 HOH B 45 545 410 HOH HOH . 
L 5 HOH B 46 546 404 HOH HOH . 
L 5 HOH B 47 547 388 HOH HOH . 
L 5 HOH B 48 548 411 HOH HOH . 
L 5 HOH B 49 549 431 HOH HOH . 
L 5 HOH B 50 550 429 HOH HOH . 
L 5 HOH B 51 551 396 HOH HOH . 
L 5 HOH B 52 552 417 HOH HOH . 
L 5 HOH B 53 553 409 HOH HOH . 
L 5 HOH B 54 554 421 HOH HOH . 
L 5 HOH B 55 555 436 HOH HOH . 
L 5 HOH B 56 556 435 HOH HOH . 
L 5 HOH B 57 557 395 HOH HOH . 
L 5 HOH B 58 558 389 HOH HOH . 
L 5 HOH B 59 559 380 HOH HOH . 
L 5 HOH B 60 560 389 HOH HOH . 
L 5 HOH B 61 561 433 HOH HOH . 
L 5 HOH B 62 562 390 HOH HOH . 
L 5 HOH B 63 563 392 HOH HOH . 
L 5 HOH B 64 564 406 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           K 
_atom_site.label_atom_id         K 
_atom_site.label_comp_id         K 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -27.066 
_atom_site.Cartn_y               6.865 
_atom_site.Cartn_z               15.158 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          K 
_atom_site.auth_comp_id          K 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#