data_5LID # _model_server_result.job_id ysdogj4usg1jXMXJWv1SBw _model_server_result.datetime_utc '2024-11-15 06:26:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":402}' # _entry.id 5LID # _exptl.entry_id 5LID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.315 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description bromopromazine _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.7 _cell.angle_gamma 90 _cell.entry_id 5LID _cell.length_a 105.72 _cell.length_b 267.91 _cell.length_c 111.33 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LID _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T 1 1 F,G,H,I,J,U,V,W,X,Y,Z,AA,BA,CA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N # _chem_comp.formula 'C17 H19 Br N2 S' _chem_comp.formula_weight 363.315 _chem_comp.id 6XY _chem_comp.mon_nstd_flag . _chem_comp.name bromopromazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N2 6XY sing 1 n n C15 N2 6XY sing 2 n n N2 C14 6XY sing 3 n n C14 C13 6XY sing 4 n n C13 C12 6XY sing 5 n n C12 N1 6XY sing 6 n n C11 C10 6XY doub 7 n y C11 C4 6XY sing 8 n y C10 C9 6XY sing 9 n y N1 C4 6XY sing 10 n n N1 C1 6XY sing 11 n n C4 C3 6XY doub 12 n y C9 C8 6XY doub 13 n y C3 C8 6XY sing 14 n y C3 S1 6XY sing 15 n n S1 C2 6XY sing 16 n n C1 C2 6XY doub 17 n y C1 C17 6XY sing 18 n y C2 C7 6XY sing 19 n y C17 C5 6XY doub 20 n y C7 C6 6XY doub 21 n y C5 C6 6XY sing 22 n y C6 H2 6XY sing 23 n n C7 H3 6XY sing 24 n n C8 H4 6XY sing 25 n n C9 H5 6XY sing 26 n n C10 H6 6XY sing 27 n n C12 H7 6XY sing 28 n n C12 H8 6XY sing 29 n n C13 H9 6XY sing 30 n n C13 H10 6XY sing 31 n n C14 H11 6XY sing 32 n n C14 H12 6XY sing 33 n n C15 H13 6XY sing 34 n n C15 H14 6XY sing 35 n n C15 H15 6XY sing 36 n n C16 H16 6XY sing 37 n n C16 H17 6XY sing 38 n n C16 H18 6XY sing 39 n n C17 H20 6XY sing 40 n n C11 H21 6XY sing 41 n n C5 BR1 6XY sing 42 n n # _atom_sites.entry_id 5LID _atom_sites.fract_transf_matrix[1][1] 0.009459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002838 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003733 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009378 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 6XY A 1 401 1 6XY 6XY . L 2 6XY A 1 402 1 6XY 6XY . M 2 6XY B 1 401 1 6XY 6XY . N 2 6XY B 1 402 1 6XY 6XY . O 2 6XY C 1 401 1 6XY 6XY . P 2 6XY C 1 402 1 6XY 6XY . Q 2 6XY D 1 401 1 6XY 6XY . R 2 6XY D 1 402 1 6XY 6XY . S 2 6XY E 1 401 1 6XY 6XY . T 2 6XY E 1 402 1 6XY 6XY . U 2 6XY F 1 401 1 6XY 6XY . V 2 6XY F 1 402 1 6XY 6XY . W 2 6XY G 1 401 1 6XY 6XY . X 2 6XY G 1 402 1 6XY 6XY . Y 2 6XY H 1 401 1 6XY 6XY . Z 2 6XY H 1 402 1 6XY 6XY . AA 2 6XY I 1 401 1 6XY 6XY . BA 2 6XY I 1 402 1 6XY 6XY . CA 2 6XY J 1 401 1 6XY 6XY . DA 2 6XY J 1 402 1 6XY 6XY . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BR _atom_site.label_atom_id BR1 _atom_site.label_comp_id 6XY _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id X _atom_site.label_entity_id 2 _atom_site.Cartn_x -79.376 _atom_site.Cartn_y -124.543 _atom_site.Cartn_z -45.08 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 431.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BR1 _atom_site.auth_comp_id 6XY _atom_site.auth_seq_id 402 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #