data_5LIW # _model_server_result.job_id 4OzVMzZmrnh7jt5lEIwMOA _model_server_result.datetime_utc '2024-11-13 04:03:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5liw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5LIW # _exptl.entry_id 5LIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 470.598 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '{2-[(4-bromo-2,3,5,6-tetrafluorobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5LIW _cell.length_a 79.585 _cell.length_b 79.585 _cell.length_c 49.854 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 32 X VAL 32 1_555 A N MLY 33 X MLY 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale2 A C MLY 33 X MLY 33 1_555 A N VAL 34 X VAL 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale3 A C GLU 61 X GLU 61 1_555 A N MLZ 62 X MLZ 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.217 ? covale ? covale4 A C MLZ 62 X MLZ 62 1_555 A N ILE 63 X ILE 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.215 ? covale ? covale5 A C GLU 94 X GLU 94 1_555 A N MLY 95 X MLY 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? covale ? covale6 A C MLY 95 X MLY 95 1_555 A N THR 96 X THR 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale7 A C VAL 154 X VAL 154 1_555 A N MLZ 155 X MLZ 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.268 ? covale ? covale8 A C MLZ 155 X MLZ 155 1_555 A N ALA 156 X ALA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? covale ? covale9 A C LEU 176 X LEU 176 1_555 A N MLZ 177 X MLZ 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? covale ? covale10 A C MLZ 177 X MLZ 177 1_555 A N TYR 178 X TYR 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale11 A C SER 202 X SER 202 1_555 A N MLY 203 X MLY 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale12 A C MLY 203 X MLY 203 1_555 A N GLY 204 X GLY 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 A C HIS 241 X HIS 241 1_555 A N MLY 242 X MLY 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.272 ? covale ? covale14 A C MLY 242 X MLY 242 1_555 A N MLZ 243 X MLZ 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? covale ? covale15 A C MLZ 243 X MLZ 243 1_555 A N THR 244 X THR 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale16 A C PRO 262 X PRO 262 1_555 A N MLY 263 X MLY 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale17 A C MLY 263 X MLY 263 1_555 A N SER 264 X SER 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C16 H9 Br Cl F4 N O4' _chem_comp.formula_weight 470.598 _chem_comp.id 1WX _chem_comp.mon_nstd_flag . _chem_comp.name '{2-[(4-bromo-2,3,5,6-tetrafluorobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C19 1WX doub 1 n n C18 C19 1WX sing 2 n n C18 O17 1WX sing 3 n n CL2 C15 1WX sing 4 n n C19 O21 1WX sing 5 n n C13 C15 1WX doub 6 n y C13 C11 1WX sing 7 n y O17 C11 1WX sing 8 n n C15 C14 1WX sing 9 n y C11 C10 1WX doub 10 n y C14 C12 1WX doub 11 n y C10 C12 1WX sing 12 n y C10 C9 1WX sing 13 n n N8 C9 1WX sing 14 n n N8 C7 1WX sing 15 n n C9 O16 1WX doub 16 n n C7 C1 1WX sing 17 n n F24 C2 1WX sing 18 n n C1 C2 1WX doub 19 n y C1 C3 1WX sing 20 n y C2 C4 1WX sing 21 n y F27 C3 1WX sing 22 n n C3 C5 1WX doub 23 n y C4 F25 1WX sing 24 n n C4 C6 1WX doub 25 n y C5 C6 1WX sing 26 n y C5 F26 1WX sing 27 n n C6 BR2 1WX sing 28 n n C7 H1 1WX sing 29 n n C7 H2 1WX sing 30 n n C12 H3 1WX sing 31 n n C13 H4 1WX sing 32 n n C14 H5 1WX sing 33 n n C18 H6 1WX sing 34 n n C18 H7 1WX sing 35 n n O21 H8 1WX sing 36 n n N8 H9 1WX sing 37 n n # _atom_sites.entry_id 5LIW _atom_sites.fract_transf_matrix[1][1] 0.012565 _atom_sites.fract_transf_matrix[1][2] 0.007255 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP X 1 401 350 NAP NAP . C 3 1WX X 1 402 900 1WX 3K9 . D 3 1WX X 1 403 901 1WX 3K9 . E 4 EDO X 1 404 1 EDO EDO . F 5 HOH X 1 501 96 HOH HOH . F 5 HOH X 2 502 131 HOH HOH . F 5 HOH X 3 503 45 HOH HOH . F 5 HOH X 4 504 81 HOH HOH . F 5 HOH X 5 505 121 HOH HOH . F 5 HOH X 6 506 73 HOH HOH . F 5 HOH X 7 507 125 HOH HOH . F 5 HOH X 8 508 126 HOH HOH . F 5 HOH X 9 509 42 HOH HOH . F 5 HOH X 10 510 14 HOH HOH . F 5 HOH X 11 511 148 HOH HOH . F 5 HOH X 12 512 71 HOH HOH . F 5 HOH X 13 513 20 HOH HOH . F 5 HOH X 14 514 166 HOH HOH . F 5 HOH X 15 515 25 HOH HOH . F 5 HOH X 16 516 118 HOH HOH . F 5 HOH X 17 517 91 HOH HOH . F 5 HOH X 18 518 106 HOH HOH . F 5 HOH X 19 519 86 HOH HOH . F 5 HOH X 20 520 182 HOH HOH . F 5 HOH X 21 521 117 HOH HOH . F 5 HOH X 22 522 103 HOH HOH . F 5 HOH X 23 523 134 HOH HOH . F 5 HOH X 24 524 151 HOH HOH . F 5 HOH X 25 525 124 HOH HOH . F 5 HOH X 26 526 44 HOH HOH . F 5 HOH X 27 527 99 HOH HOH . F 5 HOH X 28 528 95 HOH HOH . F 5 HOH X 29 529 9 HOH HOH . F 5 HOH X 30 530 79 HOH HOH . F 5 HOH X 31 531 40 HOH HOH . F 5 HOH X 32 532 27 HOH HOH . F 5 HOH X 33 533 67 HOH HOH . F 5 HOH X 34 534 136 HOH HOH . F 5 HOH X 35 535 186 HOH HOH . F 5 HOH X 36 536 74 HOH HOH . F 5 HOH X 37 537 50 HOH HOH . F 5 HOH X 38 538 175 HOH HOH . F 5 HOH X 39 539 76 HOH HOH . F 5 HOH X 40 540 132 HOH HOH . F 5 HOH X 41 541 12 HOH HOH . F 5 HOH X 42 542 68 HOH HOH . F 5 HOH X 43 543 119 HOH HOH . F 5 HOH X 44 544 19 HOH HOH . F 5 HOH X 45 545 183 HOH HOH . F 5 HOH X 46 546 46 HOH HOH . F 5 HOH X 47 547 28 HOH HOH . F 5 HOH X 48 548 36 HOH HOH . F 5 HOH X 49 549 65 HOH HOH . F 5 HOH X 50 550 53 HOH HOH . F 5 HOH X 51 551 92 HOH HOH . F 5 HOH X 52 552 188 HOH HOH . F 5 HOH X 53 553 62 HOH HOH . F 5 HOH X 54 554 23 HOH HOH . F 5 HOH X 55 555 61 HOH HOH . F 5 HOH X 56 556 5 HOH HOH . F 5 HOH X 57 557 174 HOH HOH . F 5 HOH X 58 558 32 HOH HOH . F 5 HOH X 59 559 88 HOH HOH . F 5 HOH X 60 560 39 HOH HOH . F 5 HOH X 61 561 8 HOH HOH . F 5 HOH X 62 562 66 HOH HOH . F 5 HOH X 63 563 120 HOH HOH . F 5 HOH X 64 564 85 HOH HOH . F 5 HOH X 65 565 82 HOH HOH . F 5 HOH X 66 566 6 HOH HOH . F 5 HOH X 67 567 114 HOH HOH . F 5 HOH X 68 568 16 HOH HOH . F 5 HOH X 69 569 30 HOH HOH . F 5 HOH X 70 570 41 HOH HOH . F 5 HOH X 71 571 52 HOH HOH . F 5 HOH X 72 572 72 HOH HOH . F 5 HOH X 73 573 130 HOH HOH . F 5 HOH X 74 574 109 HOH HOH . F 5 HOH X 75 575 57 HOH HOH . F 5 HOH X 76 576 29 HOH HOH . F 5 HOH X 77 577 94 HOH HOH . F 5 HOH X 78 578 38 HOH HOH . F 5 HOH X 79 579 58 HOH HOH . F 5 HOH X 80 580 18 HOH HOH . F 5 HOH X 81 581 54 HOH HOH . F 5 HOH X 82 582 104 HOH HOH . F 5 HOH X 83 583 90 HOH HOH . F 5 HOH X 84 584 178 HOH HOH . F 5 HOH X 85 585 15 HOH HOH . F 5 HOH X 86 586 78 HOH HOH . F 5 HOH X 87 587 31 HOH HOH . F 5 HOH X 88 588 80 HOH HOH . F 5 HOH X 89 589 35 HOH HOH . F 5 HOH X 90 590 70 HOH HOH . F 5 HOH X 91 591 113 HOH HOH . F 5 HOH X 92 592 75 HOH HOH . F 5 HOH X 93 593 133 HOH HOH . F 5 HOH X 94 594 185 HOH HOH . F 5 HOH X 95 595 160 HOH HOH . F 5 HOH X 96 596 128 HOH HOH . F 5 HOH X 97 597 83 HOH HOH . F 5 HOH X 98 598 47 HOH HOH . F 5 HOH X 99 599 87 HOH HOH . F 5 HOH X 100 600 137 HOH HOH . F 5 HOH X 101 601 138 HOH HOH . F 5 HOH X 102 602 7 HOH HOH . F 5 HOH X 103 603 116 HOH HOH . F 5 HOH X 104 604 22 HOH HOH . F 5 HOH X 105 605 21 HOH HOH . F 5 HOH X 106 606 122 HOH HOH . F 5 HOH X 107 607 34 HOH HOH . F 5 HOH X 108 608 97 HOH HOH . F 5 HOH X 109 609 63 HOH HOH . F 5 HOH X 110 610 191 HOH HOH . F 5 HOH X 111 611 155 HOH HOH . F 5 HOH X 112 612 156 HOH HOH . F 5 HOH X 113 613 69 HOH HOH . F 5 HOH X 114 614 127 HOH HOH . F 5 HOH X 115 615 177 HOH HOH . F 5 HOH X 116 616 33 HOH HOH . F 5 HOH X 117 617 13 HOH HOH . F 5 HOH X 118 618 37 HOH HOH . F 5 HOH X 119 619 105 HOH HOH . F 5 HOH X 120 620 24 HOH HOH . F 5 HOH X 121 621 2 HOH HOH . F 5 HOH X 122 622 98 HOH HOH . F 5 HOH X 123 623 56 HOH HOH . F 5 HOH X 124 624 115 HOH HOH . F 5 HOH X 125 625 108 HOH HOH . F 5 HOH X 126 626 84 HOH HOH . F 5 HOH X 127 627 100 HOH HOH . F 5 HOH X 128 628 143 HOH HOH . F 5 HOH X 129 629 1 HOH HOH . F 5 HOH X 130 630 11 HOH HOH . F 5 HOH X 131 631 89 HOH HOH . F 5 HOH X 132 632 51 HOH HOH . F 5 HOH X 133 633 123 HOH HOH . F 5 HOH X 134 634 192 HOH HOH . F 5 HOH X 135 635 59 HOH HOH . F 5 HOH X 136 636 145 HOH HOH . F 5 HOH X 137 637 101 HOH HOH . F 5 HOH X 138 638 4 HOH HOH . F 5 HOH X 139 639 144 HOH HOH . F 5 HOH X 140 640 164 HOH HOH . F 5 HOH X 141 641 154 HOH HOH . F 5 HOH X 142 642 184 HOH HOH . F 5 HOH X 143 643 139 HOH HOH . F 5 HOH X 144 644 170 HOH HOH . F 5 HOH X 145 645 93 HOH HOH . F 5 HOH X 146 646 168 HOH HOH . F 5 HOH X 147 647 147 HOH HOH . F 5 HOH X 148 648 150 HOH HOH . F 5 HOH X 149 649 48 HOH HOH . F 5 HOH X 150 650 102 HOH HOH . F 5 HOH X 151 651 140 HOH HOH . F 5 HOH X 152 652 173 HOH HOH . F 5 HOH X 153 653 111 HOH HOH . F 5 HOH X 154 654 172 HOH HOH . F 5 HOH X 155 655 17 HOH HOH . F 5 HOH X 156 656 169 HOH HOH . F 5 HOH X 157 657 162 HOH HOH . F 5 HOH X 158 658 146 HOH HOH . F 5 HOH X 159 659 158 HOH HOH . F 5 HOH X 160 660 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1WX . . . C 3 -3.786 23.182 -6.78 1 34.43 ? C1 1WX 402 X 1 HETATM 2 C C2 1WX . . . C 3 -2.967 22.484 -5.906 1 32.87 ? C2 1WX 402 X 1 HETATM 3 C C3 1WX . . . C 3 -3.714 22.924 -8.141 1 32.71 ? C3 1WX 402 X 1 HETATM 4 C C4 1WX . . . C 3 -2.095 21.51 -6.394 1 30.67 ? C4 1WX 402 X 1 HETATM 5 C C5 1WX . . . C 3 -2.843 21.962 -8.627 1 34.94 ? C5 1WX 402 X 1 HETATM 6 C C6 1WX . . . C 3 -2.041 21.254 -7.749 1 32.02 ? C6 1WX 402 X 1 HETATM 7 C C7 1WX . . . C 3 -4.714 24.263 -6.248 1 31.54 ? C7 1WX 402 X 1 HETATM 8 C C9 1WX . . . C 3 -3.019 25.972 -6.664 1 33.69 ? C9 1WX 402 X 1 HETATM 9 C C10 1WX . . . C 3 -1.971 26.902 -6.152 1 32.61 ? C10 1WX 402 X 1 HETATM 10 C C11 1WX . . . C 3 -2.131 27.707 -5.029 1 34.5 ? C11 1WX 402 X 1 HETATM 11 C C12 1WX . . . C 3 -0.76 26.858 -6.841 1 36.59 ? C12 1WX 402 X 1 HETATM 12 C C13 1WX . . . C 3 -1.075 28.517 -4.626 1 32.77 ? C13 1WX 402 X 1 HETATM 13 C C14 1WX . . . C 3 0.292 27.664 -6.436 1 35.01 ? C14 1WX 402 X 1 HETATM 14 C C15 1WX . . . C 3 0.127 28.482 -5.332 1 34.31 ? C15 1WX 402 X 1 HETATM 15 C C18 1WX . . . C 3 -3.536 28.498 -3.15 1 27.32 ? C18 1WX 402 X 1 HETATM 16 C C19 1WX . . . C 3 -4.317 27.63 -2.188 1 24.42 ? C19 1WX 402 X 1 HETATM 17 O O21 1WX . . . C 3 -5.036 28.165 -1.314 1 25.11 ? O21 1WX 402 X 1 HETATM 18 O O20 1WX . . . C 3 -4.257 26.387 -2.314 1 27.35 ? O20 1WX 402 X 1 HETATM 19 O O17 1WX . . . C 3 -3.327 27.731 -4.344 1 31.2 ? O17 1WX 402 X 1 HETATM 20 CL CL2 1WX . . . C 3 1.492 29.506 -4.816 1 33.8 ? CL2 1WX 402 X 1 HETATM 21 O O16 1WX . . . C 3 -3.128 25.826 -7.876 1 33.9 ? O16 1WX 402 X 1 HETATM 22 N N8 1WX . . . C 3 -3.736 25.247 -5.808 1 33.86 ? N8 1WX 402 X 1 HETATM 23 F F27 1WX . . . C 3 -4.65 23.444 -8.963 1 35.83 ? F27 1WX 402 X 1 HETATM 24 F F24 1WX . . . C 3 -2.987 22.799 -4.594 1 34.46 ? F24 1WX 402 X 1 HETATM 25 F F25 1WX . . . C 3 -1.296 20.802 -5.563 1 33.34 ? F25 1WX 402 X 1 HETATM 26 F F26 1WX . . . C 3 -2.786 21.706 -9.957 1 35.76 ? F26 1WX 402 X 1 HETATM 27 BR BR2 1WX . . . C 3 -0.855 19.927 -8.395 1 40.28 ? BR2 1WX 402 X 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 27 #