data_5LLH # _model_server_result.job_id N5IFPsCbB1R_eKDIcT2d7Q _model_server_result.datetime_utc '2024-11-17 07:39:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5llh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5LLH # _exptl.entry_id 5LLH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.172 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BICINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment BCN _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.39 _cell.angle_gamma 90 _cell.entry_id 5LLH _cell.length_a 42.239 _cell.length_b 41.089 _cell.length_c 71.854 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5LLH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N10 V49 . A V49 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? # _chem_comp.formula 'C6 H13 N O4' _chem_comp.formula_weight 163.172 _chem_comp.id BCN _chem_comp.mon_nstd_flag . _chem_comp.name BICINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 BCN sing 70 n n N1 C3 BCN sing 71 n n N1 C5 BCN sing 72 n n C1 C2 BCN sing 73 n n C1 H11 BCN sing 74 n n C1 H12 BCN sing 75 n n C2 O21 BCN doub 76 n n C2 O22 BCN sing 77 n n O22 HO2 BCN sing 78 n n C3 C4 BCN sing 79 n n C3 H31 BCN sing 80 n n C3 H32 BCN sing 81 n n C4 O4 BCN sing 82 n n C4 H41 BCN sing 83 n n C4 H42 BCN sing 84 n n O4 HO4 BCN sing 85 n n C5 C6 BCN sing 86 n n C5 H51 BCN sing 87 n n C5 H52 BCN sing 88 n n C6 O6 BCN sing 89 n n C6 H61 BCN sing 90 n n C6 H62 BCN sing 91 n n O6 HO6 BCN sing 92 n n # _atom_sites.entry_id 5LLH _atom_sites.fract_transf_matrix[1][1] 0.023675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006075 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 1 ZN ZN . C 3 V49 A 1 302 1 V49 V49 . D 4 DMS A 1 303 1 DMS DMS . E 4 DMS A 1 304 2 DMS DMS . F 5 MES A 1 305 1 MES MES . G 6 BCN A 1 306 1 BCN BCN . H 7 HOH A 1 401 66 HOH HOH . H 7 HOH A 2 402 64 HOH HOH . H 7 HOH A 3 403 152 HOH HOH . H 7 HOH A 4 404 70 HOH HOH . H 7 HOH A 5 405 103 HOH HOH . H 7 HOH A 6 406 107 HOH HOH . H 7 HOH A 7 407 47 HOH HOH . H 7 HOH A 8 408 37 HOH HOH . H 7 HOH A 9 409 93 HOH HOH . H 7 HOH A 10 410 136 HOH HOH . H 7 HOH A 11 411 24 HOH HOH . H 7 HOH A 12 412 35 HOH HOH . H 7 HOH A 13 413 2 HOH HOH . H 7 HOH A 14 414 76 HOH HOH . H 7 HOH A 15 415 114 HOH HOH . H 7 HOH A 16 416 122 HOH HOH . H 7 HOH A 17 417 124 HOH HOH . H 7 HOH A 18 418 130 HOH HOH . H 7 HOH A 19 419 94 HOH HOH . H 7 HOH A 20 420 19 HOH HOH . H 7 HOH A 21 421 81 HOH HOH . H 7 HOH A 22 422 105 HOH HOH . H 7 HOH A 23 423 55 HOH HOH . H 7 HOH A 24 424 110 HOH HOH . H 7 HOH A 25 425 49 HOH HOH . H 7 HOH A 26 426 128 HOH HOH . H 7 HOH A 27 427 56 HOH HOH . H 7 HOH A 28 428 108 HOH HOH . H 7 HOH A 29 429 137 HOH HOH . H 7 HOH A 30 430 148 HOH HOH . H 7 HOH A 31 431 28 HOH HOH . H 7 HOH A 32 432 22 HOH HOH . H 7 HOH A 33 433 1 HOH HOH . H 7 HOH A 34 434 33 HOH HOH . H 7 HOH A 35 435 8 HOH HOH . H 7 HOH A 36 436 72 HOH HOH . H 7 HOH A 37 437 10 HOH HOH . H 7 HOH A 38 438 52 HOH HOH . H 7 HOH A 39 439 7 HOH HOH . H 7 HOH A 40 440 17 HOH HOH . H 7 HOH A 41 441 91 HOH HOH . H 7 HOH A 42 442 20 HOH HOH . H 7 HOH A 43 443 34 HOH HOH . H 7 HOH A 44 444 134 HOH HOH . H 7 HOH A 45 445 4 HOH HOH . H 7 HOH A 46 446 153 HOH HOH . H 7 HOH A 47 447 61 HOH HOH . H 7 HOH A 48 448 96 HOH HOH . H 7 HOH A 49 449 135 HOH HOH . H 7 HOH A 50 450 62 HOH HOH . H 7 HOH A 51 451 36 HOH HOH . H 7 HOH A 52 452 154 HOH HOH . H 7 HOH A 53 453 3 HOH HOH . H 7 HOH A 54 454 12 HOH HOH . H 7 HOH A 55 455 29 HOH HOH . H 7 HOH A 56 456 84 HOH HOH . H 7 HOH A 57 457 63 HOH HOH . H 7 HOH A 58 458 15 HOH HOH . H 7 HOH A 59 459 113 HOH HOH . H 7 HOH A 60 460 149 HOH HOH . H 7 HOH A 61 461 83 HOH HOH . H 7 HOH A 62 462 104 HOH HOH . H 7 HOH A 63 463 121 HOH HOH . H 7 HOH A 64 464 142 HOH HOH . H 7 HOH A 65 465 25 HOH HOH . H 7 HOH A 66 466 86 HOH HOH . H 7 HOH A 67 467 6 HOH HOH . H 7 HOH A 68 468 14 HOH HOH . H 7 HOH A 69 469 79 HOH HOH . H 7 HOH A 70 470 31 HOH HOH . H 7 HOH A 71 471 57 HOH HOH . H 7 HOH A 72 472 77 HOH HOH . H 7 HOH A 73 473 46 HOH HOH . H 7 HOH A 74 474 144 HOH HOH . H 7 HOH A 75 475 40 HOH HOH . H 7 HOH A 76 476 39 HOH HOH . H 7 HOH A 77 477 71 HOH HOH . H 7 HOH A 78 478 132 HOH HOH . H 7 HOH A 79 479 50 HOH HOH . H 7 HOH A 80 480 85 HOH HOH . H 7 HOH A 81 481 45 HOH HOH . H 7 HOH A 82 482 120 HOH HOH . H 7 HOH A 83 483 75 HOH HOH . H 7 HOH A 84 484 9 HOH HOH . H 7 HOH A 85 485 87 HOH HOH . H 7 HOH A 86 486 106 HOH HOH . H 7 HOH A 87 487 138 HOH HOH . H 7 HOH A 88 488 145 HOH HOH . H 7 HOH A 89 489 126 HOH HOH . H 7 HOH A 90 490 78 HOH HOH . H 7 HOH A 91 491 92 HOH HOH . H 7 HOH A 92 492 16 HOH HOH . H 7 HOH A 93 493 5 HOH HOH . H 7 HOH A 94 494 30 HOH HOH . H 7 HOH A 95 495 38 HOH HOH . H 7 HOH A 96 496 139 HOH HOH . H 7 HOH A 97 497 133 HOH HOH . H 7 HOH A 98 498 11 HOH HOH . H 7 HOH A 99 499 13 HOH HOH . H 7 HOH A 100 500 109 HOH HOH . H 7 HOH A 101 501 44 HOH HOH . H 7 HOH A 102 502 147 HOH HOH . H 7 HOH A 103 503 90 HOH HOH . H 7 HOH A 104 504 21 HOH HOH . H 7 HOH A 105 505 27 HOH HOH . H 7 HOH A 106 506 23 HOH HOH . H 7 HOH A 107 507 116 HOH HOH . H 7 HOH A 108 508 41 HOH HOH . H 7 HOH A 109 509 151 HOH HOH . H 7 HOH A 110 510 18 HOH HOH . H 7 HOH A 111 511 117 HOH HOH . H 7 HOH A 112 512 131 HOH HOH . H 7 HOH A 113 513 54 HOH HOH . H 7 HOH A 114 514 42 HOH HOH . H 7 HOH A 115 515 102 HOH HOH . H 7 HOH A 116 516 69 HOH HOH . H 7 HOH A 117 517 115 HOH HOH . H 7 HOH A 118 518 60 HOH HOH . H 7 HOH A 119 519 99 HOH HOH . H 7 HOH A 120 520 146 HOH HOH . H 7 HOH A 121 521 100 HOH HOH . H 7 HOH A 122 522 82 HOH HOH . H 7 HOH A 123 523 43 HOH HOH . H 7 HOH A 124 524 98 HOH HOH . H 7 HOH A 125 525 123 HOH HOH . H 7 HOH A 126 526 80 HOH HOH . H 7 HOH A 127 527 141 HOH HOH . H 7 HOH A 128 528 58 HOH HOH . H 7 HOH A 129 529 53 HOH HOH . H 7 HOH A 130 530 155 HOH HOH . H 7 HOH A 131 531 111 HOH HOH . H 7 HOH A 132 532 97 HOH HOH . H 7 HOH A 133 533 59 HOH HOH . H 7 HOH A 134 534 112 HOH HOH . H 7 HOH A 135 535 119 HOH HOH . H 7 HOH A 136 536 88 HOH HOH . H 7 HOH A 137 537 150 HOH HOH . H 7 HOH A 138 538 156 HOH HOH . H 7 HOH A 139 539 129 HOH HOH . H 7 HOH A 140 540 95 HOH HOH . H 7 HOH A 141 541 32 HOH HOH . H 7 HOH A 142 542 89 HOH HOH . H 7 HOH A 143 543 101 HOH HOH . H 7 HOH A 144 544 67 HOH HOH . H 7 HOH A 145 545 118 HOH HOH . H 7 HOH A 146 546 74 HOH HOH . H 7 HOH A 147 547 73 HOH HOH . H 7 HOH A 148 548 51 HOH HOH . H 7 HOH A 149 549 143 HOH HOH . H 7 HOH A 150 550 26 HOH HOH . H 7 HOH A 151 551 68 HOH HOH . H 7 HOH A 152 552 140 HOH HOH . H 7 HOH A 153 553 125 HOH HOH . H 7 HOH A 154 554 65 HOH HOH . H 7 HOH A 155 555 48 HOH HOH . H 7 HOH A 156 556 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 BCN . . . G 6 -20.709 -14.502 23.633 1 57.8 ? N1 BCN 306 A 1 HETATM 2 C C1 BCN . . . G 6 -19.965 -15.513 22.979 1 54.08 ? C1 BCN 306 A 1 HETATM 3 C C2 BCN . . . G 6 -20.52 -16.697 22.308 1 62.14 ? C2 BCN 306 A 1 HETATM 4 O O21 BCN . . . G 6 -20.48 -16.653 21.101 1 62.62 ? O21 BCN 306 A 1 HETATM 5 O O22 BCN . . . G 6 -20.69 -17.827 22.972 1 64.71 ? O22 BCN 306 A 1 HETATM 6 C C3 BCN . . . G 6 -21.891 -13.834 23.541 1 61.25 ? C3 BCN 306 A 1 HETATM 7 C C4 BCN . . . G 6 -23.193 -14.182 24.033 1 70.05 ? C4 BCN 306 A 1 HETATM 8 O O4 BCN . . . G 6 -23.255 -13.019 24.839 1 71.47 ? O4 BCN 306 A 1 HETATM 9 C C5 BCN . . . G 6 -20.085 -13.909 24.732 1 55.11 ? C5 BCN 306 A 1 HETATM 10 C C6 BCN . . . G 6 -20.346 -15.058 25.671 1 55.21 ? C6 BCN 306 A 1 HETATM 11 O O6 BCN . . . G 6 -19.234 -15.26 26.379 1 55.25 ? O6 BCN 306 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #