data_5LNF # _model_server_result.job_id LahSAKDAGNpXGt0GZzDG4A _model_server_result.datetime_utc '2024-11-29 05:14:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5lnf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5LNF # _exptl.entry_id 5LNF _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 206.367 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description FARNESYL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 136 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 296 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id FAR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FAR _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.791 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H26' _chem_comp.formula_weight 206.367 _chem_comp.id FAR _chem_comp.mon_nstd_flag . _chem_comp.name FARNESYL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FAR sing 83 n n C1 H11 FAR sing 84 n n C1 H12A FAR sing 85 n n C1 H13 FAR sing 86 n n C2 C3 FAR doub 87 e n C2 H2 FAR sing 88 n n C3 C5 FAR sing 89 n n C3 C4 FAR sing 90 n n C5 C6 FAR sing 91 n n C5 H51 FAR sing 92 n n C5 H52 FAR sing 93 n n C6 C7 FAR sing 94 n n C6 H61 FAR sing 95 n n C6 H62 FAR sing 96 n n C7 C8 FAR doub 97 e n C7 H7 FAR sing 98 n n C8 C9 FAR sing 99 n n C8 C10 FAR sing 100 n n C9 C11 FAR sing 101 n n C9 H91 FAR sing 102 n n C9 H92 FAR sing 103 n n C11 C12 FAR sing 104 n n C11 H111 FAR sing 105 n n C11 H112 FAR sing 106 n n C12 C13 FAR doub 107 n n C12 H12 FAR sing 108 n n C13 C14 FAR sing 109 n n C13 C15 FAR sing 110 n n C14 H141 FAR sing 111 n n C14 H142 FAR sing 112 n n C14 H143 FAR sing 113 n n C15 H151 FAR sing 114 n n C15 H152 FAR sing 115 n n C15 H153 FAR sing 116 n n C4 H41 FAR sing 117 n n C4 H42 FAR sing 118 n n C4 H43 FAR sing 119 n n C10 H101 FAR sing 120 n n C10 H102 FAR sing 121 n n C10 H103 FAR sing 122 n n # _atom_sites.entry_id 5LNF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id FAR _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 1296 _pdbx_nonpoly_scheme.pdb_mon_id FAR _pdbx_nonpoly_scheme.auth_mon_id CYF _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FAR . . . B 2 3.822 3.037 5.819 1 0 ? C1 FAR 301 A 1 HETATM 2 C C2 FAR . . . B 2 2.601 3.209 4.921 1 0 ? C2 FAR 301 A 1 HETATM 3 C C3 FAR . . . B 2 1.781 2.276 4.47 1 0 ? C3 FAR 301 A 1 HETATM 4 C C5 FAR . . . B 2 0.615 2.654 3.601 1 0 ? C5 FAR 301 A 1 HETATM 5 C C6 FAR . . . B 2 0.866 2.56 2.106 1 0 ? C6 FAR 301 A 1 HETATM 6 C C7 FAR . . . B 2 1.047 1.127 1.632 1 0 ? C7 FAR 301 A 1 HETATM 7 C C8 FAR . . . B 2 0.149 0.14 1.678 1 0 ? C8 FAR 301 A 1 HETATM 8 C C9 FAR . . . B 2 0.47 -1.245 1.174 1 0 ? C9 FAR 301 A 1 HETATM 9 C C11 FAR . . . B 2 0.322 -1.434 -0.324 1 0 ? C11 FAR 301 A 1 HETATM 10 C C12 FAR . . . B 2 0.913 -0.284 -1.123 1 0 ? C12 FAR 301 A 1 HETATM 11 C C13 FAR . . . B 2 1.553 -0.33 -2.276 1 0 ? C13 FAR 301 A 1 HETATM 12 C C14 FAR . . . B 2 1.833 -1.612 -3.017 1 0 ? C14 FAR 301 A 1 HETATM 13 C C15 FAR . . . B 2 2.081 0.907 -2.929 1 0 ? C15 FAR 301 A 1 HETATM 14 C C4 FAR . . . B 2 1.958 0.804 4.738 1 0 ? C4 FAR 301 A 1 HETATM 15 C C10 FAR . . . B 2 -1.258 0.338 2.157 1 0 ? C10 FAR 301 A 1 HETATM 16 H H11 FAR . . . B 2 4.12 3.998 6.201 1 0 ? H11 FAR 301 A 1 HETATM 17 H H12A FAR . . . B 2 3.548 2.429 6.631 1 0 ? H12A FAR 301 A 1 HETATM 18 H H2 FAR . . . B 2 2.427 4.235 4.635 1 0 ? H2 FAR 301 A 1 HETATM 19 H H51 FAR . . . B 2 0.343 3.67 3.848 1 0 ? H51 FAR 301 A 1 HETATM 20 H H52 FAR . . . B 2 -0.206 2.001 3.848 1 0 ? H52 FAR 301 A 1 HETATM 21 H H61 FAR . . . B 2 0.027 2.998 1.591 1 0 ? H61 FAR 301 A 1 HETATM 22 H H62 FAR . . . B 2 1.754 3.119 1.87 1 0 ? H62 FAR 301 A 1 HETATM 23 H H7 FAR . . . B 2 2.023 0.944 1.22 1 0 ? H7 FAR 301 A 1 HETATM 24 H H91 FAR . . . B 2 -0.186 -1.94 1.681 1 0 ? H91 FAR 301 A 1 HETATM 25 H H92 FAR . . . B 2 1.49 -1.466 1.442 1 0 ? H92 FAR 301 A 1 HETATM 26 H H111 FAR . . . B 2 0.818 -2.353 -0.603 1 0 ? H111 FAR 301 A 1 HETATM 27 H H112 FAR . . . B 2 -0.729 -1.514 -0.557 1 0 ? H112 FAR 301 A 1 HETATM 28 H H12 FAR . . . B 2 0.748 0.678 -0.658 1 0 ? H12 FAR 301 A 1 HETATM 29 H H141 FAR . . . B 2 2.433 -2.263 -2.397 1 0 ? H141 FAR 301 A 1 HETATM 30 H H142 FAR . . . B 2 0.9 -2.102 -3.253 1 0 ? H142 FAR 301 A 1 HETATM 31 H H143 FAR . . . B 2 2.366 -1.392 -3.93 1 0 ? H143 FAR 301 A 1 HETATM 32 H H151 FAR . . . B 2 1.829 0.898 -3.978 1 0 ? H151 FAR 301 A 1 HETATM 33 H H152 FAR . . . B 2 1.638 1.776 -2.456 1 0 ? H152 FAR 301 A 1 HETATM 34 H H153 FAR . . . B 2 3.155 0.942 -2.812 1 0 ? H153 FAR 301 A 1 HETATM 35 H H41 FAR . . . B 2 2.906 0.477 4.334 1 0 ? H41 FAR 301 A 1 HETATM 36 H H42 FAR . . . B 2 1.158 0.253 4.266 1 0 ? H42 FAR 301 A 1 HETATM 37 H H43 FAR . . . B 2 1.938 0.626 5.803 1 0 ? H43 FAR 301 A 1 HETATM 38 H H101 FAR . . . B 2 -1.449 1.394 2.284 1 0 ? H101 FAR 301 A 1 HETATM 39 H H102 FAR . . . B 2 -1.394 -0.169 3.1 1 0 ? H102 FAR 301 A 1 HETATM 40 H H103 FAR . . . B 2 -1.943 -0.064 1.427 1 0 ? H103 FAR 301 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 6119 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 40 #